BLASTX nr result
ID: Ophiopogon23_contig00038497
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00038497
(369 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMP13105.1| hypothetical protein COLO4_02269 [Corchorus olito... 163 6e-50
gb|KZN01535.1| hypothetical protein DCAR_010289 [Daucus carota s... 160 2e-47
gb|OMP13850.1| hypothetical protein COLO4_00815 [Corchorus olito... 159 5e-47
gb|KYP36767.1| DNA-directed RNA polymerase subunit beta [Cajanus... 162 1e-46
gb|KZN01781.1| hypothetical protein DCAR_010535 [Daucus carota s... 158 3e-46
gb|EXB81188.1| DNA-directed RNA polymerase subunit beta [Morus n... 158 3e-46
gb|AFS35502.1| RNA polymerase beta subunit, partial (plastid) [F... 158 5e-46
ref|YP_009431124.1| RNA polymerase beta subunit (chloroplast) [A... 167 1e-45
gb|AFB18343.1| RNA polymerase beta subunit (plastid) [Lomandra l... 167 1e-45
gb|AEX94358.1| RNA polymerase beta subunit (chloroplast) [Eriosp... 167 1e-45
gb|AEX94341.1| RNA polymerase beta subunit (chloroplast) [Hemiph... 167 1e-45
ref|YP_009370013.1| RNA polymerase beta subunit (chloroplast) [A... 167 1e-45
gb|AFB18323.1| RNA polymerase beta subunit, partial (plastid) [A... 167 1e-45
ref|YP_009432295.1| RNA polymerase beta subunit (chloroplast) [P... 167 1e-45
ref|YP_009335325.1| RNA polymerase beta subunit (chloroplast) [N... 167 1e-45
ref|YP_009183191.1| RNA polymerase beta subunit (chloroplast) [P... 167 1e-45
ref|YP_009180100.1| RNA polymerase beta subunit (chloroplast) [P... 167 1e-45
ref|YP_009431210.1| RNA polymerase beta subunit (chloroplast) [M... 167 1e-45
gb|AEX94362.1| RNA polymerase beta subunit (chloroplast) [Sansev... 167 1e-45
gb|AEX94361.1| RNA polymerase beta subunit (chloroplast) [Ruscus... 167 1e-45
>gb|OMP13105.1| hypothetical protein COLO4_02269 [Corchorus olitorius]
Length = 112
Score = 163 bits (413), Expect = 6e-50
Identities = 80/97 (82%), Positives = 86/97 (88%)
Frame = -2
Query: 293 MGVGVDITHLLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE 114
MGV VDI HLLHN+ + +GG+RVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE
Sbjct: 1 MGVPVDIMHLLHNNHLEEGPSRGGERVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE 60
Query: 113 LLGATIIGGIVPNPEDAPESFRLLVRELRSLALELNH 3
+LG TIIGG +P PEDAPESFRLLVRELRSLALELNH
Sbjct: 61 VLGTTIIGGTIPKPEDAPESFRLLVRELRSLALELNH 97
>gb|KZN01535.1| hypothetical protein DCAR_010289 [Daucus carota subsp. sativus]
Length = 210
Score = 160 bits (405), Expect = 2e-47
Identities = 78/88 (88%), Positives = 83/88 (94%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVA+ILQEMLTYKSDHIRARQE+LG TIIGG
Sbjct: 108 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAYILQEMLTYKSDHIRARQEVLGTTIIGG 167
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
+PNPEDAPESFRLLVRELRSLALELNH
Sbjct: 168 AIPNPEDAPESFRLLVRELRSLALELNH 195
Score = 85.1 bits (209), Expect = 7e-18
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPV+IGK YILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 74 DPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 127
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 128 MEVWALEGF 136
>gb|OMP13850.1| hypothetical protein COLO4_00815 [Corchorus olitorius]
Length = 202
Score = 159 bits (402), Expect = 5e-47
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE+LG TIIGG
Sbjct: 100 LVTRQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGG 159
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
+P PEDAPESFRLLVRELRSLALELNH
Sbjct: 160 TIPKPEDAPESFRLLVRELRSLALELNH 187
Score = 84.0 bits (206), Expect = 2e-17
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPV+IGK YILKLIHQV DKIHGR SGHYALVT+QP RG + +G +G
Sbjct: 66 DPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTRQP------LRGRSKQGGQRVGE 119
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 120 MEVWALEGF 128
>gb|KYP36767.1| DNA-directed RNA polymerase subunit beta [Cajanus cajan]
Length = 325
Score = 162 bits (409), Expect = 1e-46
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE+LGATIIGG
Sbjct: 223 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGATIIGG 282
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
+P PEDAPESFRLLVRELRSLALELNH
Sbjct: 283 TIPKPEDAPESFRLLVRELRSLALELNH 310
Score = 85.1 bits (209), Expect = 4e-17
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPV+IGK YILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 189 DPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 242
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 243 MEVWALEGF 251
>gb|KZN01781.1| hypothetical protein DCAR_010535 [Daucus carota subsp. sativus]
Length = 229
Score = 158 bits (399), Expect = 3e-46
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVA+ILQEMLTYKSD+IRARQE+LG TIIGG
Sbjct: 127 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAYILQEMLTYKSDYIRARQEVLGTTIIGG 186
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
+PNPEDAPESFRLLVRELRSLALELNH
Sbjct: 187 AIPNPEDAPESFRLLVRELRSLALELNH 214
Score = 85.1 bits (209), Expect = 9e-18
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPV+IGK YILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 93 DPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 146
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 147 MEVWALEGF 155
>gb|EXB81188.1| DNA-directed RNA polymerase subunit beta [Morus notabilis]
Length = 232
Score = 158 bits (399), Expect = 3e-46
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE+LG T++GG
Sbjct: 130 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTMVGG 189
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
+P PEDAPESFRLLVRELRSLALELNH
Sbjct: 190 PIPKPEDAPESFRLLVRELRSLALELNH 217
Score = 84.3 bits (207), Expect = 2e-17
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPV+IGK YILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 96 DPFEQPVIIGKPYILKLIHQVDDKIHGRCSGHYALVTQQP------LRGRAKQGGQRVGE 149
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 150 MEVWALEGF 158
>gb|AFS35502.1| RNA polymerase beta subunit, partial (plastid) [Fragaria
pentaphylla]
Length = 248
Score = 158 bits (399), Expect = 5e-46
Identities = 77/88 (87%), Positives = 81/88 (92%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE+LG TIIGG
Sbjct: 151 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGG 210
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
+P P DAPESFRLLVRELRSLALELNH
Sbjct: 211 TIPKPADAPESFRLLVRELRSLALELNH 238
Score = 85.1 bits (209), Expect = 1e-17
Identities = 43/69 (62%), Positives = 46/69 (66%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPV+IGK YILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 117 DPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 170
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 171 MEVWALEGF 179
>ref|YP_009431124.1| RNA polymerase beta subunit (chloroplast) [Asparagus schoberioides]
gb|ASW26560.1| RNA polymerase beta subunit (chloroplast) [Asparagus schoberioides]
Length = 1070
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 968 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1027
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1028 IVPNPEDAPESFRLLVRELRSLALELNH 1055
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 934 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 987
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 988 MEVWALEGF 996
>gb|AFB18343.1| RNA polymerase beta subunit (plastid) [Lomandra longifolia]
Length = 1070
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 968 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1027
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1028 IVPNPEDAPESFRLLVRELRSLALELNH 1055
Score = 84.7 bits (208), Expect = 1e-16
Identities = 44/69 (63%), Positives = 46/69 (66%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
D FEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 934 DSFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 987
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 988 MEVWALEGF 996
>gb|AEX94358.1| RNA polymerase beta subunit (chloroplast) [Eriospermum cervicorne]
Length = 1070
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 968 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1027
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1028 IVPNPEDAPESFRLLVRELRSLALELNH 1055
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 934 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 987
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 988 MEVWALEGF 996
>gb|AEX94341.1| RNA polymerase beta subunit (chloroplast) [Hemiphylacus alatostylus]
Length = 1070
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 968 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1027
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1028 IVPNPEDAPESFRLLVRELRSLALELNH 1055
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 934 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 987
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 988 MEVWALEGF 996
>ref|YP_009370013.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
gb|AEX94340.1| RNA polymerase beta subunit (chloroplast) [Asparagus asparagoides]
gb|ARO91419.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
emb|CUS18708.1| RNA polymerase beta subunit (plastid) [Asparagus officinalis]
Length = 1070
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 968 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1027
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1028 IVPNPEDAPESFRLLVRELRSLALELNH 1055
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 934 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 987
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 988 MEVWALEGF 996
>gb|AFB18323.1| RNA polymerase beta subunit, partial (plastid) [Asparagus
officinalis]
Length = 1072
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>ref|YP_009432295.1| RNA polymerase beta subunit (chloroplast) [Polygonatum stenophyllum]
gb|ATB18550.1| RNA polymerase beta subunit (chloroplast) [Polygonatum stenophyllum]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>ref|YP_009335325.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|APO12383.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>ref|YP_009183191.1| RNA polymerase beta subunit (chloroplast) [Polygonatum verticillatum]
ref|YP_009236352.1| RNA polymerase beta subunit (chloroplast) [Polygonatum sibiricum]
gb|ALM87708.1| RNA polymerase beta subunit (chloroplast) [Polygonatum verticillatum]
gb|AMF84064.1| RNA polymerase beta subunit (chloroplast) [Polygonatum sibiricum]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>ref|YP_009180100.1| RNA polymerase beta subunit (chloroplast) [Polygonatum cyrtonema]
gb|ALL96466.1| RNA polymerase beta subunit (chloroplast) [Polygonatum cyrtonema]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>ref|YP_009431210.1| RNA polymerase beta subunit (chloroplast) [Maianthemum bicolor]
gb|AEX94363.1| RNA polymerase beta subunit (chloroplast) [Maianthemum stellatum]
gb|ASW26646.1| RNA polymerase beta subunit (chloroplast) [Maianthemum bicolor]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>gb|AEX94362.1| RNA polymerase beta subunit (chloroplast) [Sansevieria trifasciata]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999
>gb|AEX94361.1| RNA polymerase beta subunit (chloroplast) [Ruscus aculeatus]
Length = 1073
Score = 167 bits (424), Expect = 1e-45
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 266 LLHNSPIRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 87
L+ P+RGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG
Sbjct: 971 LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQELLGATIIGG 1030
Query: 86 IVPNPEDAPESFRLLVRELRSLALELNH 3
IVPNPEDAPESFRLLVRELRSLALELNH
Sbjct: 1031 IVPNPEDAPESFRLLVRELRSLALELNH 1058
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = -1
Query: 369 DPFEQPVLIGKSYILKLIHQVGDKIHGRRSGHYALVTQQPH*RKGQARGTTSRGNGSLGS 190
DPFEQPVLIGKSYILKLIHQV DKIHGR SGHYALVTQQP RG +G +G
Sbjct: 937 DPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQP------LRGRAKQGGQRVGE 990
Query: 189 RGVWCCSYF 163
VW F
Sbjct: 991 MEVWALEGF 999