BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00038031
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241462.1| pentatricopeptide repeat-containing protein ...   139   3e-36
ref|XP_010922813.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-25
ref|XP_008803027.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   3e-24
ref|XP_020113856.1| pentatricopeptide repeat-containing protein ...    94   1e-19
ref|XP_020111386.1| pentatricopeptide repeat-containing protein ...    94   1e-19
ref|XP_009384758.2| PREDICTED: pentatricopeptide repeat-containi...    77   1e-13
ref|XP_020686065.1| pentatricopeptide repeat-containing protein ...    74   2e-12
ref|XP_008647638.1| uncharacterized protein LOC100275714 isoform...    70   3e-11
ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea ma...    70   3e-11
gb|ACR38556.1| unknown [Zea mays] >gi|1142828701|gb|AQK86788.1| ...    70   3e-11
gb|PKA51157.1| Pentatricopeptide repeat-containing protein [Apos...    66   9e-10
gb|OVA02203.1| Pentatricopeptide repeat [Macleaya cordata]             65   2e-09
ref|XP_004961719.1| pentatricopeptide repeat-containing protein ...    64   6e-09
ref|XP_015637589.1| PREDICTED: pentatricopeptide repeat-containi...    64   7e-09
ref|XP_015637584.1| PREDICTED: pentatricopeptide repeat-containi...    64   8e-09
gb|AAW56871.1| unknown protein [Oryza sativa Japonica Group] >gi...    64   9e-09
gb|EEC79413.1| hypothetical protein OsI_20368 [Oryza sativa Indi...    64   9e-09
dbj|BAH93197.1| Os05g0481800 [Oryza sativa Japonica Group]             64   9e-09
ref|XP_002439972.1| pentatricopeptide repeat-containing protein ...    63   1e-08
ref|XP_020580758.1| pentatricopeptide repeat-containing protein ...    63   2e-08

>ref|XP_020241462.1| pentatricopeptide repeat-containing protein At1g11900-like
           [Asparagus officinalis]
 gb|ONK61751.1| uncharacterized protein A4U43_C08F33200 [Asparagus officinalis]
          Length = 423

 Score =  139 bits (349), Expect = 3e-36
 Identities = 68/114 (59%), Positives = 86/114 (75%)
 Frame = +3

Query: 129 TIYAPFVDNGTVSFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFT 308
           T + P++ N +VS TA+L +L P H NKR IMTWGSV +++VI+ +E FLSTI +  L T
Sbjct: 63  TAFTPYLYNDSVSDTANLFKLSPEHINKRPIMTWGSVKEEEVIQAFEKFLSTIENMNLST 122

Query: 309 KELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           +E CS YIKRLI  GNLSDA+ LF YL +RQIH+G D +N+LLNA GE NSFDL
Sbjct: 123 REKCSLYIKRLIELGNLSDAICLFSYLQDRQIHIGTDIYNILLNAAGETNSFDL 176


>ref|XP_010922813.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           [Elaeis guineensis]
          Length = 501

 Score =  110 bits (275), Expect = 2e-25
 Identities = 55/114 (48%), Positives = 76/114 (66%)
 Frame = +3

Query: 129 TIYAPFVDNGTVSFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFT 308
           T+  PFV N         C+  P H N R +MT  SVN+++V    E FLST+ D+T+ T
Sbjct: 140 TVCIPFVGNDFFPAATIECKFCPPHRNLRSVMTGVSVNEEEVTRALELFLSTVKDETVST 199

Query: 309 KELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           +E+CS YI+RL  SG LSDAV L   LH+RQIHLGL+ +N+LL+A G+A +F++
Sbjct: 200 EEMCSIYIERLCRSGKLSDAVCLLRLLHDRQIHLGLNIYNILLSAAGDAGNFNI 253


>ref|XP_008803027.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11900 [Phoenix dactylifera]
          Length = 436

 Score =  107 bits (266), Expect = 3e-24
 Identities = 55/110 (50%), Positives = 73/110 (66%)
 Frame = +3

Query: 141 PFVDNGTVSFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFTKELC 320
           PFV N  +       +  P H N R IMT  SV +++V   +E FLST  D+TL TKE+C
Sbjct: 79  PFVGNDFLPSATIEYKFCPPHRNSRSIMTGVSVGEEEVTRAFELFLSTEKDETLSTKEIC 138

Query: 321 STYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           S YI+RL  SG LSDAV L   LH RQ+HLGL+ +N+LL+A G+AN+F++
Sbjct: 139 SIYIERLCRSGKLSDAVCLLRLLHGRQVHLGLNIYNILLSAAGDANNFNI 188


>ref|XP_020113856.1| pentatricopeptide repeat-containing protein At1g11900-like [Ananas
           comosus]
          Length = 414

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 44/111 (39%), Positives = 71/111 (63%)
 Frame = +3

Query: 138 APFVDNGTVSFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFTKEL 317
           A  VDNG + F A+   +    +N+R ++TW S +D ++  +++ F ST   K +  K++
Sbjct: 65  ADLVDNGLLPFAAAAHDIFNMRTNRRSMVTWDSDDDGEITNNFDLFYSTSKGKNISDKDI 124

Query: 318 CSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           CS YI+ L +SGNL++AV L  +L NRQ H+ L+ +N+LL+   EAN+F L
Sbjct: 125 CSAYIEMLCSSGNLAEAVSLLRHLQNRQTHVSLNVYNILLSLAAEANNFSL 175


>ref|XP_020111386.1| pentatricopeptide repeat-containing protein At1g11900-like [Ananas
           comosus]
 gb|OAY67276.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 414

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 44/111 (39%), Positives = 71/111 (63%)
 Frame = +3

Query: 138 APFVDNGTVSFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFTKEL 317
           A  VDNG + F A+   +    +N+R ++TW S +D ++  +++ F ST   K +  K++
Sbjct: 65  ADLVDNGLLPFAAAAHDIFNMRTNRRSMVTWDSDDDGEITNNFDLFYSTSKGKNISDKDI 124

Query: 318 CSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           CS YI+ L +SGNL++AV L  +L NRQ H+ L+ +N+LL+   EAN+F L
Sbjct: 125 CSAYIEMLCSSGNLAEAVSLLRHLQNRQTHVSLNVYNILLSLAAEANNFSL 175


>ref|XP_009384758.2| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           [Musa acuminata subsp. malaccensis]
          Length = 520

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 36/79 (45%), Positives = 56/79 (70%)
 Frame = +3

Query: 234 SVNDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLG 413
           SV  +  ++  E F+ST  D+++  KE+C+ YI++L  SGNLSDA YL  +LH+R I++ 
Sbjct: 198 SVEQENAMKALELFISTEKDESISVKEICTIYIEKLCRSGNLSDAAYLLRHLHSRDINVC 257

Query: 414 LDTFNMLLNAVGEANSFDL 470
           L+T+N LL A+ E+N+F L
Sbjct: 258 LNTYNSLLTAIVESNNFSL 276


>ref|XP_020686065.1| pentatricopeptide repeat-containing protein At1g11900 isoform X1
           [Dendrobium catenatum]
          Length = 424

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 45/116 (38%), Positives = 65/116 (56%)
 Frame = +3

Query: 123 KCTIYAPFVDNGTVSFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTL 302
           K  I  PF     +S +A+   L     ++R I T  S+ D  + +  E+F S+   +  
Sbjct: 72  KSIIGNPFPAKFMLSSSANQSDLATVVVHRRKITTGTSITDD-LTKALEHFFSSEKHEVC 130

Query: 303 FTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
             KE+CS +I++L   GNLSDA     YLH+RQIH  L+T+N+LL A GE  +FDL
Sbjct: 131 CAKEMCSLFIQKLSKVGNLSDASSFLQYLHDRQIHPDLNTYNLLLAAAGETGNFDL 186


>ref|XP_008647638.1| uncharacterized protein LOC100275714 isoform X1 [Zea mays]
          Length = 366

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +3

Query: 213 RCIMTWGSVN--DQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHY 386
           RC+   GS N  D +VI+ ++   ST     +     C+ Y++ L  SGNL DAV +  +
Sbjct: 36  RCLQQCGSDNTDDDRVIQAFKRCCSTSASSGVSDASPCAAYVENLCRSGNLVDAVRVLRH 95

Query: 387 LHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           LH+ QIH+GL TFNMLL    EAN F L
Sbjct: 96  LHDEQIHVGLHTFNMLLQHTAEANIFTL 123


>ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea mays]
 gb|ACG29752.1| hypothetical protein [Zea mays]
          Length = 377

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +3

Query: 213 RCIMTWGSVN--DQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHY 386
           RC+   GS N  D +VI+ ++   ST     +     C+ Y++ L  SGNL DAV +  +
Sbjct: 47  RCLQQCGSDNTDDDRVIQAFKRCCSTSASSGVSDASPCAAYVENLCRSGNLVDAVRVLRH 106

Query: 387 LHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           LH+ QIH+GL TFNMLL    EAN F L
Sbjct: 107 LHDEQIHVGLHTFNMLLQHTAEANIFTL 134


>gb|ACR38556.1| unknown [Zea mays]
 gb|AQK86788.1| Pentatricopeptide repeat-containing protein [Zea mays]
          Length = 377

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +3

Query: 213 RCIMTWGSVN--DQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHY 386
           RC+   GS N  D +VI+ ++   ST     +     C+ Y++ L  SGNL DAV +  +
Sbjct: 47  RCLQQCGSDNTDDDRVIQAFKRCCSTSASSGVSDASPCAAYVENLCRSGNLVDAVRVLRH 106

Query: 387 LHNRQIHLGLDTFNMLLNAVGEANSFDL 470
           LH+ QIH+GL TFNMLL    EAN F L
Sbjct: 107 LHDEQIHVGLHTFNMLLQHTAEANIFTL 134


>gb|PKA51157.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 350

 Score = 66.2 bits (160), Expect = 9e-10
 Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
 Frame = +3

Query: 141 PFVDNGTVSFTASLCQLL-PRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFTKEL 317
           PF+DN   S  A+  +L  P  S  + +MT  S+++Q +++  E +LS+  + T      
Sbjct: 2   PFLDNLITSSPANRSKLFAPTSSQCQHLMTHSSLSEQNMVKTSELYLSSEEEDT----NS 57

Query: 318 CSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
            S YI++L  SG L DAV     L++RQIHL L  +N+LL A  EA++FD+
Sbjct: 58  DSIYIRKLCRSGKLLDAVSFLRDLYDRQIHLDLHDYNILLEAACEASNFDV 108


>gb|OVA02203.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 370

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +3

Query: 207 NKRCIMTWGSVNDQKVIE-DWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFH 383
           N + I T  S  +Q + E D  + LS I +  +F +E C+ YI++L  SGN  DA  L  
Sbjct: 45  NYQLITTQASAEEQVLTEEDLNHILSEIENNPVFGRETCTCYIEKLSRSGNFLDAARLMQ 104

Query: 384 YLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
            L ++Q+ L  +T+N+LL A GE N FDL
Sbjct: 105 GLRDKQVFLSPNTYNILLVAAGEGNHFDL 133


>ref|XP_004961719.1| pentatricopeptide repeat-containing protein At1g11900 [Setaria
           italica]
 gb|KQL14988.1| hypothetical protein SETIT_025361mg [Setaria italica]
          Length = 379

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = +3

Query: 240 NDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLD 419
           +D + IE +++  S     +       + YI +L  SGNL DAV +  +LH++QIH+GLD
Sbjct: 61  DDDEAIEAFKHDCSITASSSASDASASTAYIDKLSRSGNLVDAVRVLQHLHHQQIHVGLD 120

Query: 420 TFNMLLNAVGEANSFDL 470
           TFN+LL    EA+ FDL
Sbjct: 121 TFNVLLQQAAEADGFDL 137


>ref|XP_015637589.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X2 [Oryza sativa Japonica Group]
          Length = 334

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +3

Query: 240 NDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLD 419
           +D +V+E +     T     +      + Y+++L TSGNL DAV +  +LH+R+IH+GL 
Sbjct: 15  DDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLG 74

Query: 420 TFNMLLNAVGEANSFDL 470
           TFN++L   GE N+F L
Sbjct: 75  TFNLVLEQTGEVNNFVL 91


>ref|XP_015637584.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X1 [Oryza sativa Japonica Group]
 ref|XP_015637585.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X1 [Oryza sativa Japonica Group]
 ref|XP_015637586.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X1 [Oryza sativa Japonica Group]
 ref|XP_015637587.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X1 [Oryza sativa Japonica Group]
 ref|XP_015637588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X1 [Oryza sativa Japonica Group]
 dbj|BAG94848.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAG99108.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAS94590.1| Os05g0481800 [Oryza sativa Japonica Group]
          Length = 389

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +3

Query: 240 NDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLD 419
           +D +V+E +     T     +      + Y+++L TSGNL DAV +  +LH+R+IH+GL 
Sbjct: 70  DDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLG 129

Query: 420 TFNMLLNAVGEANSFDL 470
           TFN++L   GE N+F L
Sbjct: 130 TFNLVLEQTGEVNNFVL 146


>gb|AAW56871.1| unknown protein [Oryza sativa Japonica Group]
 gb|EEE64123.1| hypothetical protein OsJ_18955 [Oryza sativa Japonica Group]
          Length = 433

 Score = 63.5 bits (153), Expect = 9e-09
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +3

Query: 240 NDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLD 419
           +D +V+E +     T     +      + Y+++L TSGNL DAV +  +LH+R+IH+GL 
Sbjct: 70  DDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLG 129

Query: 420 TFNMLLNAVGEANSFDL 470
           TFN++L   GE N+F L
Sbjct: 130 TFNLVLEQTGEVNNFVL 146


>gb|EEC79413.1| hypothetical protein OsI_20368 [Oryza sativa Indica Group]
          Length = 433

 Score = 63.5 bits (153), Expect = 9e-09
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +3

Query: 240 NDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLD 419
           +D +V+E +     T     +      + Y+++L TSGNL DAV +  +LH+R+IH+GL 
Sbjct: 70  DDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLG 129

Query: 420 TFNMLLNAVGEANSFDL 470
           TFN++L   GE N+F L
Sbjct: 130 TFNLVLEQTGEVNNFVL 146


>dbj|BAH93197.1| Os05g0481800 [Oryza sativa Japonica Group]
          Length = 438

 Score = 63.5 bits (153), Expect = 9e-09
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +3

Query: 240 NDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYLHNRQIHLGLD 419
           +D +V+E +     T     +      + Y+++L TSGNL DAV +  +LH+R+IH+GL 
Sbjct: 70  DDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLG 129

Query: 420 TFNMLLNAVGEANSFDL 470
           TFN++L   GE N+F L
Sbjct: 130 TFNLVLEQTGEVNNFVL 146


>ref|XP_002439972.1| pentatricopeptide repeat-containing protein At1g11900 [Sorghum
           bicolor]
 gb|EES18402.1| hypothetical protein SORBI_3009G176300 [Sorghum bicolor]
          Length = 377

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = +3

Query: 216 CIMTWGSVN--DQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLITSGNLSDAVYLFHYL 389
           C+   GS N  D +V + ++   ST     +     C++YI+ L  SGNL DAV +   L
Sbjct: 48  CLQQCGSDNTVDDRVSQAFKRCCSTSASSGVSDASPCASYIENLCRSGNLVDAVRVLRQL 107

Query: 390 HNRQIHLGLDTFNMLLNAVGEANSFDL 470
           H+ Q+H+ L TFNMLL    EAN F L
Sbjct: 108 HDEQVHVSLHTFNMLLQHTAEANIFTL 134


>ref|XP_020580758.1| pentatricopeptide repeat-containing protein At1g11900 isoform X1
           [Phalaenopsis equestris]
          Length = 425

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%)
 Frame = +3

Query: 165 SFTASLCQLLPRHSNKRCIMTWGSVNDQKVIEDWENFLSTIHDKTLFTKELCSTYIKRLI 344
           S ++   +L     + R I T  SV D+ + +  + F S   D+  + K++CS  I++L 
Sbjct: 86  SLSSKQSELASEVGHYRKISTAISVTDESLTKALQLFFSNEKDEVCYRKDMCSILIEKLC 145

Query: 345 TSGNLSDAVYLFHYLHNRQIHLGLDTFNMLLNAVGEANSFDL 470
             GNLSDAV L  + +++Q+H  L+ +N LL    E + FDL
Sbjct: 146 KVGNLSDAVSLLQHSNDKQLHPNLNAYNSLLAEAAETSDFDL 187