BLASTX nr result

ID: Ophiopogon23_contig00038027 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00038027
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERM93392.1| hypothetical protein AMTR_s05569p00002680, partia...    74   1e-14
gb|AGC78984.1| hypothetical protein (mitochondrion) [Vicia faba]       59   3e-08

>gb|ERM93392.1| hypothetical protein AMTR_s05569p00002680, partial [Amborella
           trichopoda]
          Length = 82

 Score = 73.9 bits (180), Expect = 1e-14
 Identities = 41/68 (60%), Positives = 47/68 (69%)
 Frame = -2

Query: 427 GEYAAEQSQGLPAVRDKLTRWAA*NLEQPFQSEINVGSRLSEKGILKRRITKCKKGRTKR 248
           GEYAAEQ QGLPAV  +LTRWAA NLE  F+SEINVGSR   +        +  KGRTKR
Sbjct: 4   GEYAAEQPQGLPAVIAELTRWAAQNLELTFESEINVGSRRKTQTEAPDHKMQHNKGRTKR 63

Query: 247 LREEANQS 224
           LRE  ++S
Sbjct: 64  LREGRSES 71


>gb|AGC78984.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 118

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = -2

Query: 427 GEYAAEQSQGLPAVRDKLTRWAA*NLEQPFQSEIN------VGSRLSEKGILKRRITKCK 266
           GEYAAEQ QGLPAV  +LTRWAA N+E  F+   N      +    +E G  K+  T  +
Sbjct: 23  GEYAAEQPQGLPAVIAELTRWAAQNMELTFKEIGNQRRIPAIRKTQTEAGDHKKNAT--Q 80

Query: 265 KGRTKRLREEANQS 224
           KGRTKRLRE  ++S
Sbjct: 81  KGRTKRLREGRSES 94


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