BLASTX nr result

ID: Ophiopogon23_contig00037753 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00037753
         (597 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246619.1| serine/threonine-protein kinase RHS3-like [A...    60   6e-07

>ref|XP_020246619.1| serine/threonine-protein kinase RHS3-like [Asparagus officinalis]
 gb|ONK80359.1| uncharacterized protein A4U43_C01F16800 [Asparagus officinalis]
          Length = 656

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 56/160 (35%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
 Frame = +1

Query: 139 MSTMTPGKASSHDKEXXXXXXXXXXXXXXLEASTYTGAHPGQCSNXXXXXXXXXXXXXXX 318
           MSTM P K S+ +K+              LEA+   G HPG  S                
Sbjct: 1   MSTMKPEKDST-EKKSTDSFYGNSDDSTNLEANVGLGEHPGPSSTKPLLDEELTTSRSSH 59

Query: 319 XX--LESVAKDMN-TDVHXXXXXXXXXXXXXXLETAATSPSSTKLSDDRVSNSHSSRKQE 489
               LE V KD +  D H              L+      SSTK+S D  S+SHSSR QE
Sbjct: 60  DNKKLELVGKDKSKNDEHSLSPSSVSSETTTTLKL-----SSTKISFDEASDSHSSRNQE 114

Query: 490 IST--SAKPSSNDDKLDSISKDCNDCN---DPSAQPGERP 594
           ++   S   S++D KLDS SKD  D     +PSAQP E P
Sbjct: 115 LNAVKSENSSTSDGKLDSNSKDNKDHTTSLNPSAQPDEHP 154


Top