BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00037673
         (840 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   234   8e-67
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   231   7e-66
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   231   8e-66
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   229   4e-65
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   222   2e-62
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   201   5e-55
gb|PKA46324.1| DNA-directed RNA polymerase 2, chloroplastic/mito...   198   6e-54
gb|PKU80441.1| DNA-directed RNA polymerase 2, chloroplastic/mito...   192   8e-53
ref|XP_020694074.1| DNA-directed RNA polymerase 2, chloroplastic...   192   5e-52
ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   192   9e-52
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   191   2e-51
gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sin...   191   2e-51
gb|ESR44229.1| hypothetical protein CICLE_v10010966mg [Citrus cl...   189   5e-51
gb|ESR44227.1| hypothetical protein CICLE_v10010966mg [Citrus cl...   189   5e-51
ref|XP_024037643.1| DNA-directed RNA polymerase 2, chloroplastic...   189   5e-51
ref|XP_024037642.1| DNA-directed RNA polymerase 2, chloroplastic...   189   6e-51
ref|XP_006430988.1| DNA-directed RNA polymerase 2, chloroplastic...   189   6e-51
ref|XP_023870355.1| DNA-directed RNA polymerase 2B, chloroplasti...   188   2e-50
ref|XP_010261429.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   187   2e-50
ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   187   2e-50

>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
           dactylifera]
          Length = 1036

 Score =  234 bits (597), Expect = 8e-67
 Identities = 140/291 (48%), Positives = 178/291 (61%), Gaps = 21/291 (7%)
 Frame = +2

Query: 29  FHPLNFPTPLTSQPLVTQQS-FHPKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHL 205
           F P++ P P  S P+  +   F PKS            M R +A+ A  S +NL F    
Sbjct: 9   FPPVDSPKPRPSPPIRKETDHFSPKS----------SNMWRIIAQTASNSLKNLRFFAGG 58

Query: 206 LLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIA 385
            LS+ RPISSFLGFS +   C +N + DL+ P    F ++G  +N E  P V  S   I 
Sbjct: 59  SLSALRPISSFLGFSQDSFLCEKNRIWDLRPPLSSRFCDIGSHRNGELWPSVGYSNCSIG 118

Query: 386 SPRASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELSK------------GSQIS 517
                L +SKG+A  A+ + STD+DEE    EE+QSLL E+S+              +  
Sbjct: 119 KLSGFLANSKGYANVAEAVVSTDLDEEASSIEEIQSLLEEMSRVEVAEDWKVSDRSQEFP 178

Query: 518 GQIHL---KKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYM 688
            +  L   KK + MG  KY +LR+RQ+K+ETEAWE+AAKEY+E L+DMCEQKLAPNLPY+
Sbjct: 179 QKAQLEEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYV 238

Query: 689 KSLFLGWFEPLRDEIAAEQERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           KSLFLGWFEP RD+IAAEQE+CR    RAA+GPY  +LPADMM VITMHKL
Sbjct: 239 KSLFLGWFEPFRDKIAAEQEKCRDVRNRAAYGPYIGQLPADMMAVITMHKL 289


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X2 [Elaeis
           guineensis]
          Length = 1036

 Score =  231 bits (590), Expect = 7e-66
 Identities = 140/290 (48%), Positives = 176/290 (60%), Gaps = 20/290 (6%)
 Frame = +2

Query: 29  FHPLNFPTPLTSQPLVTQQSFHPKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLL 208
           F P++ P P  S  +  +    P          K   M R  A+ A  S++NL FS    
Sbjct: 9   FPPVDSPKPRPSYQIPKETDHFPL---------KSSDMWRIFAQTASNSSKNLRFSAGRS 59

Query: 209 LSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIAS 388
           LS+ RPISSFLGF+ +     +N +LDL+ P    F ++G   N E  P V  S  PI  
Sbjct: 60  LSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFCDIGPHHNGELWPSVGYSNCPIGK 119

Query: 389 PRASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELS---------------KGSQ 511
               L +S+GFA  A+ +ASTD+DEE    EE+QSLL E S               K  Q
Sbjct: 120 LSGFLANSRGFADVAEAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQ 179

Query: 512 ISGQIHLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMK 691
            + +   KK + MG  KY +LR+RQ+K+ETEAWE+AAKEY+E L+DMCEQKLAPNLPY+K
Sbjct: 180 KAQREEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVK 239

Query: 692 SLFLGWFEPLRDEIAAEQERCRANR-RAAHGPYFDRLPADMMTVITMHKL 838
           SL LGWFEP RD+IAAEQE+CR  R RAA+GPY  +LPADMM VITMHKL
Sbjct: 240 SLLLGWFEPFRDKIAAEQEKCREVRNRAAYGPYIGQLPADMMAVITMHKL 289


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X1 [Elaeis
           guineensis]
          Length = 1042

 Score =  231 bits (590), Expect = 8e-66
 Identities = 140/290 (48%), Positives = 176/290 (60%), Gaps = 20/290 (6%)
 Frame = +2

Query: 29  FHPLNFPTPLTSQPLVTQQSFHPKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLL 208
           F P++ P P  S  +  +    P          K   M R  A+ A  S++NL FS    
Sbjct: 9   FPPVDSPKPRPSYQIPKETDHFPL---------KSSDMWRIFAQTASNSSKNLRFSAGRS 59

Query: 209 LSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIAS 388
           LS+ RPISSFLGF+ +     +N +LDL+ P    F ++G   N E  P V  S  PI  
Sbjct: 60  LSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFCDIGPHHNGELWPSVGYSNCPIGK 119

Query: 389 PRASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELS---------------KGSQ 511
               L +S+GFA  A+ +ASTD+DEE    EE+QSLL E S               K  Q
Sbjct: 120 LSGFLANSRGFADVAEAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQ 179

Query: 512 ISGQIHLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMK 691
            + +   KK + MG  KY +LR+RQ+K+ETEAWE+AAKEY+E L+DMCEQKLAPNLPY+K
Sbjct: 180 KAQREEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVK 239

Query: 692 SLFLGWFEPLRDEIAAEQERCRANR-RAAHGPYFDRLPADMMTVITMHKL 838
           SL LGWFEP RD+IAAEQE+CR  R RAA+GPY  +LPADMM VITMHKL
Sbjct: 240 SLLLGWFEPFRDKIAAEQEKCREVRNRAAYGPYIGQLPADMMAVITMHKL 289


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Phoenix dactylifera]
          Length = 1038

 Score =  229 bits (585), Expect = 4e-65
 Identities = 132/258 (51%), Positives = 171/258 (66%), Gaps = 22/258 (8%)
 Frame = +2

Query: 131 PQIMLRNLARRAPISTQNLIFS--PHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPR 304
           P+ M RNLAR+A  S++ L F+  P  + + P  ISSFLG S + + C ++ +LDL  P 
Sbjct: 35  PKEMWRNLARKASSSSRYLDFAGRPSSVPAIPS-ISSFLGSSQDSICCERSRILDLGTPF 93

Query: 305 IYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EE 472
            +  S  G+  N +S P +    + I      L DS+ FA+ A+ ++STDVDE+    EE
Sbjct: 94  SHRSSNTGVGHNGDSSPFIRCPNFSIGRISGRLGDSRFFASVAEAVSSTDVDEDTSSIEE 153

Query: 473 MQSLLGELSK-----GSQISGQIHLKKANQ----------MGKGKYRRLRRRQVKVETEA 607
           +Q +L E+SK     GS+I G +   +  Q          MG GKY  LRRRQ+++ETEA
Sbjct: 154 IQGMLEEMSKIDVREGSKIGGNLEEVRPKQQLGQPRMVCGMGSGKYAILRRRQIRIETEA 213

Query: 608 WEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERCRANR-RAAHGP 784
           WE+AAKEY+E L DMCEQKLAPNLPY+KSLFLGWFEPLRD+IAAEQE+CR  R R +HGP
Sbjct: 214 WEQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEQCRDPRTRVSHGP 273

Query: 785 YFDRLPADMMTVITMHKL 838
           YF +LPADMM VITMHKL
Sbjct: 274 YFYQLPADMMAVITMHKL 291


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score =  222 bits (565), Expect = 2e-62
 Identities = 130/258 (50%), Positives = 171/258 (66%), Gaps = 22/258 (8%)
 Frame = +2

Query: 131 PQIMLRNLARRAPISTQNLIFS--PHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPR 304
           P+ M RNLA +A  S++ L F+  P  + + P  ISSF+G + + +SC ++ +LDL AP 
Sbjct: 35  PKEMWRNLATKASSSSRYLGFAGRPSSVPAIPS-ISSFIGSAQDSISCERSRILDLTAPF 93

Query: 305 IYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EE 472
            +  S +G   N + LP +  S   I      L DS+ FA+ A+ +ASTDVDE+    EE
Sbjct: 94  SHRSSNMGFCHNGDLLPFIRRSNSSIWRISGHLGDSRFFASVAEAVASTDVDEDASSIEE 153

Query: 473 MQSLLGELSK-----GSQISGQIH-------LKKANQ---MGKGKYRRLRRRQVKVETEA 607
           +Q +L E+SK     GS+I G +        L+K      MG GKY  LRRRQ+++ETEA
Sbjct: 154 IQGMLEEMSKIDAREGSKIGGNLEEVRPKVPLEKPRMVPGMGSGKYAILRRRQIRIETEA 213

Query: 608 WEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERC-RANRRAAHGP 784
           WE+AAKEY+E L DMCEQKLAPNLPY+KSLFLGWFEPLRD+IAAEQE+C     R ++G 
Sbjct: 214 WEQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEKCGDPGNRLSYGR 273

Query: 785 YFDRLPADMMTVITMHKL 838
           YF++LPADMM VITMHKL
Sbjct: 274 YFNQLPADMMAVITMHKL 291


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score =  201 bits (511), Expect = 5e-55
 Identities = 118/250 (47%), Positives = 156/250 (62%), Gaps = 17/250 (6%)
 Frame = +2

Query: 140 MLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFS 319
           M R++ARRA ++   L      +L +      F+GFS + +        +LK+   + FS
Sbjct: 40  MWRHIARRASLTKVRLSRDSSSILRT----FGFMGFSQDSILNDTTRPFELKSSMSFRFS 95

Query: 320 ELGMVQNRE--------SLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE--- 466
           E   ++N E          P++   + PI+ PR S    KG+A+ A+ + S D +E+   
Sbjct: 96  ERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSN-HPKGYASVAEAVCSMDAEEDLSA 154

Query: 467 -EEMQSLLGELSKGS----QISGQIHLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEY 631
            +E+Q LL E+ K      ++  Q  +K    MG+GKY  LRRRQVK+ETEAWE+AAKEY
Sbjct: 155 IDEIQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEY 214

Query: 632 REFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERCRANR-RAAHGPYFDRLPAD 808
           RE L DMCEQKLAPNLPYMKSLFLGWFEPLRD I AEQE CR  + R A+ PYFD+LPA+
Sbjct: 215 RELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAE 274

Query: 809 MMTVITMHKL 838
           MM+VITMHKL
Sbjct: 275 MMSVITMHKL 284


>gb|PKA46324.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Apostasia shenzhenica]
          Length = 1037

 Score =  198 bits (503), Expect = 6e-54
 Identities = 114/245 (46%), Positives = 155/245 (63%), Gaps = 1/245 (0%)
 Frame = +2

Query: 107 PSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVL 286
           PS +  ++ + M  +LA +A  S++NL  S      SPR   SFLGF H+ + C + ++L
Sbjct: 51  PSFSSPARSKDMWLSLATQALYSSRNLRLSGRSAFCSPRVFFSFLGFPHSRIPCEKESIL 110

Query: 287 DLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE 466
           +LK P    FSE+G   N  S PL     + +      +   +G ++ A EIASTDVDEE
Sbjct: 111 ELK-PLCLRFSEMGSRPNAASRPLSDYLSHSMIRSSGFISRYRGMSSVAAEIASTDVDEE 169

Query: 467 EEMQSLLGELSKGSQISGQIHLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLK 646
            E  +    +      S +   ++    G  K+ +LRRRQ+K+ETEAWE+AAKEY+E L+
Sbjct: 170 GEAITEWKSMETSQDNSQK---QRPASSGLRKFYKLRRRQIKLETEAWEQAAKEYKELLE 226

Query: 647 DMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERCR-ANRRAAHGPYFDRLPADMMTVI 823
           DMC++KLAPNLPY+KSLFLGWFEPLRD+IA EQE  R A+ RA + P F+ LPADMM VI
Sbjct: 227 DMCKKKLAPNLPYVKSLFLGWFEPLRDKIAEEQESFRDAHSRAPYAPVFNLLPADMMAVI 286

Query: 824 TMHKL 838
           TMHK+
Sbjct: 287 TMHKM 291


>gb|PKU80441.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Dendrobium catenatum]
          Length = 698

 Score =  192 bits (488), Expect = 8e-53
 Identities = 110/218 (50%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
 Frame = +2

Query: 188 IFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVID 367
           + S +L+ SS R ISSF+G +  P  C + A+LDLK      FS L   +NR  L  + D
Sbjct: 11  LHSRNLIRSSYRCISSFIGLTREPYPCSKKAILDLK------FS-LSSQKNRFLLFALDD 63

Query: 368 SKYPIASPRASLIDSKGFATAADEIASTDVDEEEEMQSLLGELSKGSQISGQIHLKKANQ 547
            K PIA P   +   +G A+ A+E+ STDVDE+ E    L  +    + + +   K+A  
Sbjct: 64  LKCPIAKPPGFI---RGLASVAEEVVSTDVDEDVEACVELKTIESSEESARK---KQAAL 117

Query: 548 MGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRD 727
           M   K+ RLRRRQ+K+ETEAWE+AAKEYRE L++MC++KLAPNLPY+KSLFLGWFEPLRD
Sbjct: 118 MSARKFHRLRRRQIKLETEAWEQAAKEYRELLEEMCKKKLAPNLPYVKSLFLGWFEPLRD 177

Query: 728 EIAAEQERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           +IA EQE C+  + R  + P F+ LPADMM VITMHK+
Sbjct: 178 KIAEEQELCKDVHCRTPYAPCFNLLPADMMAVITMHKM 215


>ref|XP_020694074.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
           [Dendrobium catenatum]
          Length = 937

 Score =  192 bits (488), Expect = 5e-52
 Identities = 110/218 (50%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
 Frame = +2

Query: 188 IFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVID 367
           + S +L+ SS R ISSF+G +  P  C + A+LDLK      FS L   +NR  L  + D
Sbjct: 11  LHSRNLIRSSYRCISSFIGLTREPYPCSKKAILDLK------FS-LSSQKNRFLLFALDD 63

Query: 368 SKYPIASPRASLIDSKGFATAADEIASTDVDEEEEMQSLLGELSKGSQISGQIHLKKANQ 547
            K PIA P   +   +G A+ A+E+ STDVDE+ E    L  +    + + +   K+A  
Sbjct: 64  LKCPIAKPPGFI---RGLASVAEEVVSTDVDEDVEACVELKTIESSEESARK---KQAAL 117

Query: 548 MGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRD 727
           M   K+ RLRRRQ+K+ETEAWE+AAKEYRE L++MC++KLAPNLPY+KSLFLGWFEPLRD
Sbjct: 118 MSARKFHRLRRRQIKLETEAWEQAAKEYRELLEEMCKKKLAPNLPYVKSLFLGWFEPLRD 177

Query: 728 EIAAEQERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           +IA EQE C+  + R  + P F+ LPADMM VITMHK+
Sbjct: 178 KIAEEQELCKDVHCRTPYAPCFNLLPADMMAVITMHKM 215


>ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
 emb|CBI16911.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1035

 Score =  192 bits (487), Expect = 9e-52
 Identities = 119/269 (44%), Positives = 157/269 (58%), Gaps = 32/269 (11%)
 Frame = +2

Query: 128 KPQIMLRNLARRA-PISTQNLIFSPHLLLSSPRPISSFLGFSHN-------------PLS 265
           KP +M RN+A+RA P + +  ++     LS      SFLGFS +             P S
Sbjct: 36  KPTVMWRNIAKRAIPRAPRKCVYLDSQPLSRRY---SFLGFSQDLIFPEIMKFGTFEPSS 92

Query: 266 CPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDS---------KG 418
           C  +   ++      GF  +G + +RE           +  P    + +         K 
Sbjct: 93  CSSSGFSEM------GFRRIGEISSREDA---------VGRPSFGCLRNQMGFSGFCPKS 137

Query: 419 FATAADEIASTDVDEE----EEMQSLLGELSKGSQ----ISGQIHLKKANQMGKGKYRRL 574
           +A+ A+ ++STDV+E+    +E+Q LLGE+ K  +       +  LK    M +G+Y RL
Sbjct: 138 YASVAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRL 197

Query: 575 RRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERC 754
           RRRQVK+ETEAWE AAKEY+E L DMCEQKLAPNLPYMKSLFLGWFEPLRD I  EQE C
Sbjct: 198 RRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELC 257

Query: 755 RANR-RAAHGPYFDRLPADMMTVITMHKL 838
           R  + +AA+ PYFD+LPADMM+VITMHKL
Sbjct: 258 RLGKNKAAYAPYFDQLPADMMSVITMHKL 286


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Citrus sinensis]
 dbj|GAY46321.1| hypothetical protein CUMW_096150 [Citrus unshiu]
          Length = 1026

 Score =  191 bits (485), Expect = 2e-51
 Identities = 97/148 (65%), Positives = 115/148 (77%), Gaps = 6/148 (4%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSKGSQISGQIHLKK-ANQMGKGKYRRLR 577
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K  Q  G  + ++ A  MG GKYR L+
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEQQSGGGRNRRRVARGMGSGKYRMLK 189

Query: 578 RRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERCR 757
            RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQERCR
Sbjct: 190 MRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 249

Query: 758 -ANRRAAHGPYFDRLPADMMTVITMHKL 838
            A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 MAKHKVAYAPYFDQLPADMMAVITMHKL 277


>gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sinensis]
          Length = 1030

 Score =  191 bits (484), Expect = 2e-51
 Identities = 98/152 (64%), Positives = 115/152 (75%), Gaps = 10/152 (6%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSK-----GSQISGQIHLKKANQMGKGKY 565
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K     G   SG+   + A  MG GKY
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGSGRNRRRVARGMGSGKY 189

Query: 566 RRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQ 745
           R L+ RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQ
Sbjct: 190 RMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQ 249

Query: 746 ERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           ERCR A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 ERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281


>gb|ESR44229.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  189 bits (481), Expect = 5e-51
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 10/152 (6%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSK-----GSQISGQIHLKKANQMGKGKY 565
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K     G    G+   + A  MG GKY
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKY 189

Query: 566 RRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQ 745
           R L+ RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQ
Sbjct: 190 RMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQ 249

Query: 746 ERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           ERCR A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 ERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281


>gb|ESR44227.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  189 bits (481), Expect = 5e-51
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 10/152 (6%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSK-----GSQISGQIHLKKANQMGKGKY 565
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K     G    G+   + A  MG GKY
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKY 189

Query: 566 RRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQ 745
           R L+ RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQ
Sbjct: 190 RMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQ 249

Query: 746 ERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           ERCR A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 ERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281


>ref|XP_024037643.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform
           X3 [Citrus clementina]
          Length = 936

 Score =  189 bits (481), Expect = 5e-51
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 10/152 (6%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSK-----GSQISGQIHLKKANQMGKGKY 565
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K     G    G+   + A  MG GKY
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKY 189

Query: 566 RRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQ 745
           R L+ RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQ
Sbjct: 190 RMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQ 249

Query: 746 ERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           ERCR A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 ERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281


>ref|XP_024037642.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform
           X2 [Citrus clementina]
          Length = 1014

 Score =  189 bits (481), Expect = 6e-51
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 10/152 (6%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSK-----GSQISGQIHLKKANQMGKGKY 565
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K     G    G+   + A  MG GKY
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKY 189

Query: 566 RRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQ 745
           R L+ RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQ
Sbjct: 190 RMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQ 249

Query: 746 ERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           ERCR A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 ERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281


>ref|XP_006430988.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform
           X1 [Citrus clementina]
 gb|ESR44228.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  189 bits (481), Expect = 6e-51
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 10/152 (6%)
 Frame = +2

Query: 413 KGFATAADEIASTDVDEE----EEMQSLLGELSK-----GSQISGQIHLKKANQMGKGKY 565
           +G+AT A+ ++STDV+E+    EE+Q LL E+ K     G    G+   + A  MG GKY
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKY 189

Query: 566 RRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQ 745
           R L+ RQVK+ETEAWE+AA EYRE L DMCEQKLAPNLPYMKSLFLGWFEPLRD IA EQ
Sbjct: 190 RMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQ 249

Query: 746 ERCR-ANRRAAHGPYFDRLPADMMTVITMHKL 838
           ERCR A  + A+ PYFD+LPADMM VITMHKL
Sbjct: 250 ERCRMAKHKVAYAPYFDQLPADMMAVITMHKL 281


>ref|XP_023870355.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           [Quercus suber]
 gb|POE88831.1| dna-directed rna polymerase 2b, chloroplastic/mitochondrial
           [Quercus suber]
          Length = 1027

 Score =  188 bits (478), Expect = 2e-50
 Identities = 126/263 (47%), Positives = 160/263 (60%), Gaps = 15/263 (5%)
 Frame = +2

Query: 95  PKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQ 274
           P S P QN +     M  N+A+RA I  QN      L   S R  +SFLG +H+P+  P+
Sbjct: 27  PTSFP-QNPSRISATMWSNIAKRA-IQFQNPRRFCLLNSQSLRRANSFLGLTHHPI-LPE 83

Query: 275 NAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIA--- 445
                 K    YGFSE+G  +N E L     +  P           KG+A+ A+  A   
Sbjct: 84  K----FKYRPSYGFSEMGFRRNGEILSHEEFTGRPSFGFNGFFCP-KGYASVAEAEAEAA 138

Query: 446 -STDVDEEE----EMQSLLGELSKGSQISGQIHLKKANQ------MGKGKYRRLRRRQVK 592
            STDV+E+     E+Q LL E++K  +   Q+  K+  +      MG+GKY+ LRRRQVK
Sbjct: 139 SSTDVEEDVLVGVEVQELLREMNKEEK--RQVEYKRRRRRTMMRGMGQGKYQMLRRRQVK 196

Query: 593 VETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEIAAEQERCRANR-R 769
           +ETEAWE+AAKEY+E L DMCEQKLAPNLPYMKSLFLGWFEPLRD I  EQE CR  + +
Sbjct: 197 IETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIEKEQELCRRGKNK 256

Query: 770 AAHGPYFDRLPADMMTVITMHKL 838
           AA+ PY ++LP DMM+VITMHKL
Sbjct: 257 AAYAPYINQLPPDMMSVITMHKL 279


>ref|XP_010261429.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X3 [Nelumbo
           nucifera]
          Length = 923

 Score =  187 bits (476), Expect = 2e-50
 Identities = 111/216 (51%), Positives = 141/216 (65%), Gaps = 16/216 (7%)
 Frame = +2

Query: 239 LGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDS--------KYPIASPR 394
           +G+S  P+   +    + K+    GFSE   ++N ES     D         +  +   R
Sbjct: 29  VGYSQYPVFHDKARQFEFKSSINAGFSESCFLRNGESPSKEDDLGILSFGCFRNSMGLSR 88

Query: 395 ASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELSKGS---QISGQIHLKKANQMG 553
            S    KG+A+ A+ ++STD +E+    +E+Q LL E+SK     + S Q   K    MG
Sbjct: 89  FSN-HPKGYASVAEVLSSTDAEEDVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMG 147

Query: 554 KGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEI 733
           +GKY  LRRRQVK+ETEAWE+AAKEY+E L DMCEQKLAPNLPYMKSLFLGWFEPLRD I
Sbjct: 148 QGKYLLLRRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCI 207

Query: 734 AAEQERCRANR-RAAHGPYFDRLPADMMTVITMHKL 838
           AAEQE CR  + RAA+ PYFD+LPA+MM+VITMHKL
Sbjct: 208 AAEQELCRKGKNRAAYAPYFDQLPAEMMSVITMHKL 243


>ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X2 [Nelumbo
           nucifera]
          Length = 942

 Score =  187 bits (476), Expect = 2e-50
 Identities = 111/216 (51%), Positives = 141/216 (65%), Gaps = 16/216 (7%)
 Frame = +2

Query: 239 LGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDS--------KYPIASPR 394
           +G+S  P+   +    + K+    GFSE   ++N ES     D         +  +   R
Sbjct: 29  VGYSQYPVFHDKARQFEFKSSINAGFSESCFLRNGESPSKEDDLGILSFGCFRNSMGLSR 88

Query: 395 ASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELSKGS---QISGQIHLKKANQMG 553
            S    KG+A+ A+ ++STD +E+    +E+Q LL E+SK     + S Q   K    MG
Sbjct: 89  FSN-HPKGYASVAEVLSSTDAEEDVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMG 147

Query: 554 KGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMCEQKLAPNLPYMKSLFLGWFEPLRDEI 733
           +GKY  LRRRQVK+ETEAWE+AAKEY+E L DMCEQKLAPNLPYMKSLFLGWFEPLRD I
Sbjct: 148 QGKYLLLRRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCI 207

Query: 734 AAEQERCRANR-RAAHGPYFDRLPADMMTVITMHKL 838
           AAEQE CR  + RAA+ PYFD+LPA+MM+VITMHKL
Sbjct: 208 AAEQELCRKGKNRAAYAPYFDQLPAEMMSVITMHKL 243