BLASTX nr result

ID: Ophiopogon23_contig00037567 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00037567
         (1151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024164501.1| uncharacterized protein LOC112171573 [Rosa c...    60   4e-06
emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera]    61   4e-06

>ref|XP_024164501.1| uncharacterized protein LOC112171573 [Rosa chinensis]
          Length = 428

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
 Frame = +2

Query: 71  ELKKIWTSNQDWVLYPFTGKRFLVQIKPISKLHSLVAEGIVDSAFGKINIKQWS-GMEGS 247
           +LKK W++  +W+  P     F++Q K ++ +  + A G +    G + + +WS     S
Sbjct: 76  QLKKGWSALNEWIAAPLGKGFFMLQFKTLADMQRVWAMGSIQLQQGMLRLIRWSPSFSPS 135

Query: 248 IIENR*RKIWIRLHNLPVFVWDFTALSKLVKGFGDLVLIDDLTKN*SQFVEAMVLVACTS 427
             +N   ++W+R  +L    WD   L ++  G G  + +D  TKN +  + A +LV    
Sbjct: 136 TYKNTFAQVWVRFWDLGFAFWDHQTLFEIASGVGTPLKLDPRTKNCTIGLYARILVDVDF 195

Query: 428 PNDIPVKLKV 457
               P KL++
Sbjct: 196 SQPPPDKLRI 205


>emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera]
          Length = 2935

 Score = 60.8 bits (146), Expect = 4e-06
 Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = +2

Query: 62   VFAELKKIWTSNQDWVLYPFTGKRFLVQIKPISKLHSLVAEGIVDSAFGKINIKQWSGME 241
            +F +  K+W    +  L      + L++ + I++    + +G V      + +++WS   
Sbjct: 1557 IFEDKAKLWGLKGNLGLVKLEDGKALLEFEVITEAEKALKDGEVPVGGFVMRLEKWSQRT 1616

Query: 242  GSIIEN-R*RKIWIRLHNLPVFVWDFTALSKLVKGFGDLVLIDDLTKN*SQFVEAMVLVA 418
            G ++E  R R+ W+R+  LP+ +WD+  LSK+ +G G  + IDD T+   +   A +LV 
Sbjct: 1617 GCLMEGERGREAWVRIVGLPISLWDWDILSKIGEGCGGFLDIDDKTERMEELQWARILVR 1676

Query: 419  CTSPNDIPVKLKVYIEMYTY 478
                  IP  +++++E   Y
Sbjct: 1677 IKG-EKIPNMVEIWVENMCY 1695


Top