BLASTX nr result
ID: Ophiopogon23_contig00037189
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00037189
(594 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009180098.1| RNA polymerase beta' subunit (chloroplast) [... 315 2e-96
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio... 315 2e-96
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [... 315 2e-96
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 315 3e-96
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 315 3e-96
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [... 313 6e-96
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [... 313 6e-96
ref|YP_009431122.1| RNA polymerase beta' subunit (chloroplast) [... 313 9e-96
ref|YP_009370011.1| RNA polymerase beta' subunit (chloroplast) [... 313 9e-96
gb|AEX94816.1| RNA polymerase beta' subunit (chloroplast) [Aspar... 313 9e-96
gb|AEX94815.1| RNA polymerase beta' subunit (chloroplast) [Aspar... 313 9e-96
ref|YP_009432547.1| RNA polymerase beta' subunit (chloroplast) [... 313 1e-95
gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordy... 313 1e-95
gb|AAV74372.1| RopC2, partial (chloroplast) [Acorus gramineus] 299 2e-95
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N... 312 2e-95
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl... 312 2e-95
ref|YP_009327294.1| RNA polymerase beta'' subunit (chloroplast) ... 311 3e-95
ref|YP_009335494.1| RNA polymerase beta subunit (chloroplast) [S... 311 3e-95
ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [H... 311 3e-95
ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [A... 311 3e-95
>ref|YP_009180098.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum cyrtonema]
gb|ALL96465.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum cyrtonema]
Length = 1359
Score = 315 bits (806), Expect = 2e-96
Identities = 155/156 (99%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 335
>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
Length = 1381
Score = 315 bits (806), Expect = 2e-96
Identities = 155/156 (99%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 335
>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
Length = 1382
Score = 315 bits (806), Expect = 2e-96
Identities = 155/156 (99%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 335
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 315 bits (806), Expect = 3e-96
Identities = 155/156 (99%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 315 bits (806), Expect = 3e-96
Identities = 155/156 (99%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339
>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
stenophyllum]
gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
stenophyllum]
Length = 1381
Score = 313 bits (803), Expect = 6e-96
Identities = 154/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEK+F
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKMF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 335
>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
Length = 1381
Score = 313 bits (803), Expect = 6e-96
Identities = 154/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTC+NTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCKNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 335
>ref|YP_009431122.1| RNA polymerase beta' subunit (chloroplast) [Asparagus
schoberioides]
gb|ASW26558.1| RNA polymerase beta' subunit (chloroplast) [Asparagus
schoberioides]
Length = 1385
Score = 313 bits (802), Expect = 9e-96
Identities = 153/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIS+SPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISMSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 335
>ref|YP_009370011.1| RNA polymerase beta' subunit (chloroplast) [Asparagus officinalis]
gb|ARO91417.1| RNA polymerase beta' subunit (chloroplast) [Asparagus officinalis]
Length = 1385
Score = 313 bits (802), Expect = 9e-96
Identities = 153/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIS+SPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISMSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 335
>gb|AEX94816.1| RNA polymerase beta' subunit (chloroplast) [Asparagus asparagoides]
Length = 1389
Score = 313 bits (802), Expect = 9e-96
Identities = 153/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIS+SPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISMSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 339
>gb|AEX94815.1| RNA polymerase beta' subunit (chloroplast) [Asparagus officinalis]
gb|AEZ49471.1| RNA polymerase beta'' subunit, partial (plastid) [Asparagus
officinalis]
emb|CUS18625.1| RNA polymerase beta' subunit (plastid) [Asparagus officinalis]
emb|CUS18706.1| RNA polymerase beta' subunit (plastid) [Asparagus officinalis]
Length = 1389
Score = 313 bits (802), Expect = 9e-96
Identities = 153/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIS+SPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISMSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 339
>ref|YP_009432547.1| RNA polymerase beta' subunit (chloroplast) [Cordyline indivisa]
gb|ATB18829.1| RNA polymerase beta' subunit (chloroplast) [Cordyline indivisa]
Length = 1384
Score = 313 bits (801), Expect = 1e-95
Identities = 153/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSP+NGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPQNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 335
>gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordyline australis]
Length = 1388
Score = 313 bits (801), Expect = 1e-95
Identities = 153/156 (98%), Positives = 156/156 (100%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSP+NGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPQNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 339
>gb|AAV74372.1| RopC2, partial (chloroplast) [Acorus gramineus]
Length = 615
Score = 299 bits (765), Expect = 2e-95
Identities = 141/156 (90%), Positives = 152/156 (97%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI+VRRTDCGTIR ISV PRNG+TE++F
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVQPRNGMTERMF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
QTLIGRVLADD+Y+G+RCIAARNQDIG+GL NRFITFRAQP+YIRTPFTCR+TSWICQL
Sbjct: 244 FQTLIGRVLADDVYIGLRCIAARNQDIGIGLVNRFITFRAQPVYIRTPFTCRSTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR 339
>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina
atopocarpa]
gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1385
Score = 312 bits (800), Expect = 2e-95
Identities = 154/156 (98%), Positives = 155/156 (99%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAI VSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIFVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339
>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
Length = 1385
Score = 312 bits (800), Expect = 2e-95
Identities = 154/156 (98%), Positives = 155/156 (99%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAI VSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIFVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIAARNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339
>ref|YP_009327294.1| RNA polymerase beta'' subunit (chloroplast) [Agave americana]
gb|AOV94028.1| RNA polymerase beta'' subunit (chloroplast) [Agave americana]
Length = 1380
Score = 311 bits (798), Expect = 3e-95
Identities = 153/156 (98%), Positives = 154/156 (98%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR ISVSPRNGVTEKIF
Sbjct: 180 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIF 239
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIA RNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 240 VQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 299
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 300 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 335
>ref|YP_009335494.1| RNA polymerase beta subunit (chloroplast) [Schoenolirion croceum]
gb|APO12638.1| RNA polymerase beta subunit (chloroplast) [Schoenolirion croceum]
Length = 1384
Score = 311 bits (798), Expect = 3e-95
Identities = 153/156 (98%), Positives = 154/156 (98%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR ISVSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIA RNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339
>ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
gb|APO12127.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
Length = 1384
Score = 311 bits (798), Expect = 3e-95
Identities = 153/156 (98%), Positives = 154/156 (98%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR ISVSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIA RNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339
>ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
gb|APO11119.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
Length = 1384
Score = 311 bits (798), Expect = 3e-95
Identities = 153/156 (98%), Positives = 154/156 (98%)
Frame = +1
Query: 1 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTEKIF 180
ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR ISVSPRNGVTEKIF
Sbjct: 184 ISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIF 243
Query: 181 VQTLIGRVLADDIYMGIRCIAARNQDIGVGLANRFITFRAQPIYIRTPFTCRNTSWICQL 360
VQTLIGRVLADDIYMGIRCIA RNQDIG+GLANRFITFRAQPIYIRTPFTCRNTSWICQL
Sbjct: 244 VQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQL 303
Query: 361 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 468
CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR
Sbjct: 304 CYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLR 339