BLASTX nr result

ID: Ophiopogon23_contig00037050 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00037050
         (884 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAY39020.1| hypothetical protein CUMW_041190 [Citrus unshiu]       45   5e-08

>dbj|GAY39020.1| hypothetical protein CUMW_041190 [Citrus unshiu]
          Length = 581

 Score = 45.1 bits (105), Expect(2) = 5e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = -3

Query: 354 VCLPRIVDDRNLRVADFAQFWAIAKVYSYSLF 259
           VCL  +VDDRNLRVADFAQFWA AK   Y ++
Sbjct: 303 VCLV-LVDDRNLRVADFAQFWATAKRSGYEVY 333



 Score = 41.2 bits (95), Expect(2) = 5e-08
 Identities = 19/33 (57%), Positives = 19/33 (57%)
 Frame = -1

Query: 437 CSAYAVCTVFIFTND*CSIVWQLTHLCWYVCLV 339
           C     C   IFTN  CS V QLT  CWYVCLV
Sbjct: 274 CLLMCPCAACIFTNYRCSFVRQLTLSCWYVCLV 306


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