BLASTX nr result

ID: Ophiopogon23_contig00036910 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00036910
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253590.1| F-box protein SKIP24 isoform X5 [Asparagus o...    59   2e-07
ref|XP_020253589.1| F-box protein SKIP24 isoform X4 [Asparagus o...    59   2e-07
ref|XP_020253588.1| F-box protein SKIP24 isoform X3 [Asparagus o...    59   2e-07
ref|XP_020253586.1| F-box protein SKIP24 isoform X2 [Asparagus o...    59   2e-07
ref|XP_020253585.1| F-box protein SKIP24 isoform X1 [Asparagus o...    59   2e-07

>ref|XP_020253590.1| F-box protein SKIP24 isoform X5 [Asparagus officinalis]
          Length = 242

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 331 MSFLPDEMWARILELGTSSAQLSYLDLCSVSAASRR 438
           MS LPDE+W RI+ELGTSS+QLSY DLCS+S + RR
Sbjct: 1   MSILPDELWTRIMELGTSSSQLSYRDLCSISISCRR 36


>ref|XP_020253589.1| F-box protein SKIP24 isoform X4 [Asparagus officinalis]
 gb|ONK77932.1| uncharacterized protein A4U43_C02F12450 [Asparagus officinalis]
          Length = 244

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 331 MSFLPDEMWARILELGTSSAQLSYLDLCSVSAASRR 438
           MS LPDE+W RI+ELGTSS+QLSY DLCS+S + RR
Sbjct: 1   MSILPDELWTRIMELGTSSSQLSYRDLCSISISCRR 36


>ref|XP_020253588.1| F-box protein SKIP24 isoform X3 [Asparagus officinalis]
          Length = 253

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 331 MSFLPDEMWARILELGTSSAQLSYLDLCSVSAASRR 438
           MS LPDE+W RI+ELGTSS+QLSY DLCS+S + RR
Sbjct: 1   MSILPDELWTRIMELGTSSSQLSYRDLCSISISCRR 36


>ref|XP_020253586.1| F-box protein SKIP24 isoform X2 [Asparagus officinalis]
          Length = 259

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 331 MSFLPDEMWARILELGTSSAQLSYLDLCSVSAASRR 438
           MS LPDE+W RI+ELGTSS+QLSY DLCS+S + RR
Sbjct: 1   MSILPDELWTRIMELGTSSSQLSYRDLCSISISCRR 36


>ref|XP_020253585.1| F-box protein SKIP24 isoform X1 [Asparagus officinalis]
          Length = 260

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 331 MSFLPDEMWARILELGTSSAQLSYLDLCSVSAASRR 438
           MS LPDE+W RI+ELGTSS+QLSY DLCS+S + RR
Sbjct: 1   MSILPDELWTRIMELGTSSSQLSYRDLCSISISCRR 36


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