BLASTX nr result

ID: Ophiopogon23_contig00036721 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00036721
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263420.1| uncharacterized protein At5g23160-like [Aspa...    55   9e-06

>ref|XP_020263420.1| uncharacterized protein At5g23160-like [Asparagus officinalis]
 gb|ONK73699.1| uncharacterized protein A4U43_C04F34350 [Asparagus officinalis]
          Length = 253

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 55/166 (33%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
 Frame = +2

Query: 41  DIGEKETL----HKNHTSKSNRPRGNSMLNVKVQQQPEQA-ANIDTGSQGTTSLPRISVK 205
           D+ E  T     +K+        R    L  ++QQQ ++  A  +T SQ  TSLP IS K
Sbjct: 77  DVAESSTPSGKENKDRLQSQKAKRNKHKLKPQIQQQEQRLQARTNTVSQ-ITSLPEISFK 135

Query: 206 YD-----ARSQLPNLVXXXXXXXHARSSEPNQLPVPDEKSDHQRANLDHLVGLSVLVVTL 370
           Y+     ARS+ P  V          SS+P            + A LD  VGL VL +TL
Sbjct: 136 YNSSRPRARSR-PEPVQTTTRTQETGSSKPEL---------DRHAKLDPTVGLLVLGITL 185

Query: 371 AVMLVWXXXXXXXXXXXXFYLVPLLRMTAVT--DGNSTDRENTVEL 502
           A MLV             FY++PLLR T  T  D   T  +  V+L
Sbjct: 186 ATMLVCGRVCAVMCLCACFYVLPLLRGTPTTKEDNGYTKNDENVDL 231


Top