BLASTX nr result
ID: Ophiopogon23_contig00036716
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00036716
(469 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 102 3e-27
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s... 102 3e-27
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s... 101 2e-25
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s... 101 1e-24
ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6... 92 7e-24
ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6... 96 5e-23
ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6... 90 1e-22
gb|ESR64043.1| hypothetical protein CICLE_v100094941mg, partial ... 97 1e-22
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 95 1e-22
ref|XP_021814364.1| DNA-directed RNA polymerase III subunit RPC6... 98 3e-22
ref|XP_007208807.1| DNA-directed RNA polymerase III subunit rpc6... 98 3e-22
ref|XP_008238459.1| PREDICTED: DNA-directed RNA polymerase III s... 98 4e-22
ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III s... 98 4e-22
ref|XP_010519479.1| PREDICTED: probable DNA-directed RNA polymer... 97 6e-22
ref|XP_021824434.1| DNA-directed RNA polymerase III subunit rpc6... 97 6e-22
ref|XP_020410990.1| DNA-directed RNA polymerase III subunit rpc6... 97 6e-22
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 92 6e-22
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 92 6e-22
ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 82 8e-22
ref|XP_018831899.1| PREDICTED: DNA-directed RNA polymerase III s... 93 8e-22
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927733.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927735.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 102 bits (254), Expect(2) = 3e-27
Identities = 52/101 (51%), Positives = 71/101 (70%)
Frame = +1
Query: 28 MLPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*S 207
MLPQKR PDS P L E +YELI+ ++++G A++K++ G+ ++ TK L S
Sbjct: 6 MLPQKRPHPDSKPKLPALSETERILYELIRSKQNIGIWTADMKRET-GLQTTVVTKTLKS 64
Query: 208 LQA*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
LQ NLIK+V ++ +K +KIYMA+EFEPSKEISGG WY DG
Sbjct: 65 LQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDG 105
Score = 47.4 bits (111), Expect(2) = 3e-27
Identities = 19/47 (40%), Positives = 34/47 (72%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD+ I+ILR++C+ I++ + T+E I+++I+ SRVF + T+Q
Sbjct: 105 GSLDIEFIRILREQCLKHIERLQIATMEAIYKSIQESRVFKVECTMQ 151
>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
ref|XP_008813400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
Length = 232
Score = 102 bits (255), Expect(2) = 3e-27
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +1
Query: 28 MLPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*S 207
MLPQKR PDS L E +YELIK +++LG A++K++ G+ ++ TK L S
Sbjct: 1 MLPQKRPHPDSKTKLPPLSETERVLYELIKSKQNLGIWTADMKRET-GLQTTVVTKTLKS 59
Query: 208 LQA*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
LQ NLIK+V ++ +K +KIYMAVEFEPSKEISGG WY DG
Sbjct: 60 LQNKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDG 100
Score = 46.6 bits (109), Expect(2) = 3e-27
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD I+ILR++C+ I++ V T+E I+++I+ SRVF + T+Q
Sbjct: 100 GSLDTDFIRILREQCLKHIERLQVATMEAIYKSIQESRVFKVECTMQ 146
>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_009386160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 101 bits (251), Expect(2) = 2e-25
Identities = 53/101 (52%), Positives = 72/101 (71%)
Frame = +1
Query: 28 MLPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*S 207
M PQKR++PDS L +E +YELIK R+++G A++KK+ G+ + TKAL S
Sbjct: 6 MTPQKRAQPDSQSQPPALPENERILYELIKSRKNMGIWTADMKKET-GLQNIVVTKALKS 64
Query: 208 LQA*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
LQ NLIK+V +V +K +KI+MAVEFEPSKE+SGG WY +G
Sbjct: 65 LQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEG 105
Score = 42.0 bits (97), Expect(2) = 2e-25
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD I ILR+ C+ I++ V T+E IW++I S V T+Q
Sbjct: 105 GSLDTEFINILRKMCLKHIEELKVATIEDIWKSISASGVLKVACTMQ 151
>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_018684305.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 101 bits (252), Expect(2) = 1e-24
Identities = 54/101 (53%), Positives = 71/101 (70%)
Frame = +1
Query: 28 MLPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*S 207
M PQKR +PDS L E +YELIK R+++G A++K++A GI + TKAL S
Sbjct: 6 MTPQKRRQPDSQTQPPALPESERIVYELIKSRKNMGIWIADIKREA-GIQNIIVTKALKS 64
Query: 208 LQA*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
LQ+ NLIK+V +V +K +K +MAVEFEPSKE+SGG WY DG
Sbjct: 65 LQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDG 105
Score = 38.9 bits (89), Expect(2) = 1e-24
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD I ILR C+ I+ + T+E I + I SR+ + T+Q
Sbjct: 105 GSLDTEFINILRMMCLKHIEDLRIATIEDIHKCIAASRIMKVECTMQ 151
>ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
ref|XP_020691280.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
gb|PKU75411.1| hypothetical protein MA16_Dca020480 [Dendrobium catenatum]
Length = 231
Score = 92.4 bits (228), Expect(2) = 7e-24
Identities = 51/100 (51%), Positives = 67/100 (67%)
Frame = +1
Query: 31 LPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SL 210
LPQKR P L +E ++Y+LI +E LG A++KK+ G+P + TKAL SL
Sbjct: 8 LPQKRKVP-------ALPENEKKLYDLIWSKETLGIWTADMKKET-GLPNNAVTKALKSL 59
Query: 211 QA*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
Q+ IK+V ++ +K KKIYMAVEFEPSKEISGG WY +G
Sbjct: 60 QSKGFIKDVVNIHNKAKKIYMAVEFEPSKEISGGTWYSEG 99
Score = 45.8 bits (107), Expect(2) = 7e-24
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD+ I ILR++C +++ V T+E +W+ IR S+VF D +LQ
Sbjct: 99 GSLDLEFITILRKQCRLHVERLKVATLENVWQFIRDSKVFYIDFSLQ 145
>ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
ref|XP_024036378.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
gb|ESR40488.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gb|KDO45213.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
gb|KDO45214.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
dbj|GAY63105.1| hypothetical protein CUMW_222970 [Citrus unshiu]
Length = 233
Score = 96.3 bits (238), Expect(2) = 5e-23
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQA-IGIPESMATKAL*SLQA 216
KR RPDS P L HE IY++I+ ++D+G ++K++ + +P+++ TK++ SLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 217 *NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
+LIKEV ++ K KK MAVEFEPSKEISGG WY +G
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEG 100
Score = 39.3 bits (90), Expect(2) = 5e-23
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD IK+++ +C+ +I K V T+E I ++I+ S F D+T Q
Sbjct: 100 GSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQ 146
>ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6 [Phalaenopsis
equestris]
Length = 282
Score = 89.7 bits (221), Expect(2) = 1e-22
Identities = 50/100 (50%), Positives = 67/100 (67%)
Frame = +1
Query: 31 LPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SL 210
LPQKR P L +E ++++LI ++ LG A++KKQ G+ + TKAL SL
Sbjct: 59 LPQKRKLPP-------LPENEKKLHDLIWSKQSLGIWTADMKKQT-GLANNAVTKALKSL 110
Query: 211 QA*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
Q+ NLIK+V +V +K +K +MAVEFEPSKEISGG WY DG
Sbjct: 111 QSKNLIKDVVNVHNKARKFFMAVEFEPSKEISGGTWYSDG 150
Score = 44.7 bits (104), Expect(2) = 1e-22
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD+ I+ILR++C +++ + +VE +W+ +R S +F + +LQ
Sbjct: 150 GTLDLEFIRILREQCRMHVERLKIASVENVWKCVRDSGIFKTECSLQ 196
>gb|ESR64043.1| hypothetical protein CICLE_v100094941mg, partial [Citrus
clementina]
Length = 153
Score = 97.1 bits (240), Expect = 1e-22
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQA-IGIPESMATKAL*SLQA 216
KR RPDS P L HE IY++I+ ++D+G ++K++ + +P+++ TK++ SLQ
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQN 80
Query: 217 *NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
+LIKEV ++ +K KK MAVEFEPSKEISGG WY +G
Sbjct: 81 KSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEG 118
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 94.7 bits (234), Expect(2) = 1e-22
Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQA-IGIPESMATKAL*SLQA 216
KR RP+S P L HE IY++I+ ++D+G ++K++ + +P+++ TK++ SLQ
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 217 *NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
+LIKEV ++ K KK MAVEFEPSKEISGG WY +G
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEG 100
Score = 39.3 bits (90), Expect(2) = 1e-22
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD IK+++ +C+ +I K V T+E I ++I+ S F D+T Q
Sbjct: 100 GSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQ 146
>ref|XP_021814364.1| DNA-directed RNA polymerase III subunit RPC6-like [Prunus avium]
Length = 236
Score = 98.2 bits (243), Expect = 3e-22
Identities = 46/97 (47%), Positives = 69/97 (71%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR +PDS P L HE +Y +I+ ++D+G ++KK+A +P+++ K++ SLQA
Sbjct: 8 KRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQAK 66
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
NLIKEV +V+ K +K YMA EFEPSKE++GG+WY +G
Sbjct: 67 NLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNG 103
>ref|XP_007208807.1| DNA-directed RNA polymerase III subunit rpc6 [Prunus persica]
gb|ONI06549.1| hypothetical protein PRUPE_5G067300 [Prunus persica]
Length = 236
Score = 98.2 bits (243), Expect = 3e-22
Identities = 46/97 (47%), Positives = 69/97 (71%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR +PDS P L HE +Y +I+ ++D+G ++KK+A +P+++ K++ SLQA
Sbjct: 8 KRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQAK 66
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
NLIKEV +V+ K +K YMA EFEPSKE++GG+WY +G
Sbjct: 67 NLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNG 103
>ref|XP_008238459.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Prunus mume]
Length = 236
Score = 97.8 bits (242), Expect = 4e-22
Identities = 46/97 (47%), Positives = 69/97 (71%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR +PDS P L HE +Y +I+ ++D+G ++KK+A +P+++ K++ SLQA
Sbjct: 8 KRKQPDSSSPSESLTEHEKIVYTVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQAK 66
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
NLIKEV +V+ K +K YMA EFEPSKE++GG+WY +G
Sbjct: 67 NLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNG 103
>ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Prunus mume]
Length = 236
Score = 97.8 bits (242), Expect = 4e-22
Identities = 47/97 (48%), Positives = 69/97 (71%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR +PDS P L HE IY +I+ ++D+G ++KK+A +P+++ K++ SLQA
Sbjct: 8 KRKQPDSNSPSESLTEHEKIIYNVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQAK 66
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
NLIKEV +V+ K +K YMA EFEPSKE++GG+WY +G
Sbjct: 67 NLIKEVVNVQSKGRKHYMASEFEPSKELTGGDWYSNG 103
>ref|XP_010519479.1| PREDICTED: probable DNA-directed RNA polymerase III subunit rpc6
[Tarenaya hassleriana]
Length = 231
Score = 97.4 bits (241), Expect = 6e-22
Identities = 50/108 (46%), Positives = 73/108 (67%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR RPD P L HE ++YE+I+ ++D+G + ELK A GI +++ T++L SL+
Sbjct: 3 KRKRPDPKSPAGALNEHERKLYEVIQAKQDMGASKFELKT-ATGILDNIVTRSLNSLKTK 61
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDGGARRAVDQNIE 363
NLIKEV ++ +K K +MAVEFEPSKEI+GG+WY DG +N++
Sbjct: 62 NLIKEVQNINNKGFKHFMAVEFEPSKEITGGDWYTDGNLNMTFIENLK 109
>ref|XP_021824434.1| DNA-directed RNA polymerase III subunit rpc6-like [Prunus avium]
ref|XP_021824435.1| DNA-directed RNA polymerase III subunit rpc6-like [Prunus avium]
Length = 236
Score = 97.4 bits (241), Expect = 6e-22
Identities = 46/97 (47%), Positives = 69/97 (71%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR +PDS P L HE +Y +I+ ++D+G ++KK+A +P+++ K++ SLQA
Sbjct: 8 KRKQPDSNSPSESLTEHEKIVYNVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQAK 66
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
NLIKEV +V+ K +K YMA EFEPSKE++GG+WY +G
Sbjct: 67 NLIKEVVNVQSKGRKHYMASEFEPSKELTGGDWYSNG 103
>ref|XP_020410990.1| DNA-directed RNA polymerase III subunit rpc6 [Prunus persica]
gb|ONI36224.1| hypothetical protein PRUPE_1G576300 [Prunus persica]
Length = 236
Score = 97.4 bits (241), Expect = 6e-22
Identities = 46/97 (47%), Positives = 69/97 (71%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQA* 219
KR +PDS P L HE +Y +I+ ++D+G ++KK+A +P+++ K++ SLQA
Sbjct: 8 KRKQPDSNSPSESLTEHEKIVYNVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQAK 66
Query: 220 NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
NLIKEV +V+ K +K YMA EFEPSKE++GG+WY +G
Sbjct: 67 NLIKEVVNVQSKGRKHYMASEFEPSKELTGGDWYSNG 103
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 92.4 bits (228), Expect(2) = 6e-22
Identities = 47/99 (47%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKG-REDLGTLRAELKKQA-IGIPESMATKAL*SLQ 213
KR RPDS P L HE IY++I+ ++D+G ++K++ + +P+++ TK++ SLQ
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 214 A*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
+LIKEV ++ +K KK MAVEFEPSKEISGG WY +G
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEG 119
Score = 39.3 bits (90), Expect(2) = 6e-22
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD IK+++ +C+ +I K V T+E I ++I+ S F D+T Q
Sbjct: 119 GSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQ 165
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 92.4 bits (228), Expect(2) = 6e-22
Identities = 47/99 (47%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = +1
Query: 40 KRSRPDSGPPRTKLI*HESEIYELIKG-REDLGTLRAELKKQA-IGIPESMATKAL*SLQ 213
KR RPDS P L HE IY++I+ ++D+G ++K++ + +P+++ TK++ SLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 214 A*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
+LIKEV ++ +K KK MAVEFEPSKEISGG WY +G
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEG 101
Score = 39.3 bits (90), Expect(2) = 6e-22
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD IK+++ +C+ +I K V T+E I ++I+ S F D+T Q
Sbjct: 101 GSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQ 147
>ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc6-like [Elaeis guineensis]
Length = 240
Score = 82.0 bits (201), Expect(2) = 8e-22
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = +1
Query: 31 LPQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SL 210
LPQK+ DS L E +Y LIK +++LG A+ K+ G+ ++ TK L SL
Sbjct: 7 LPQKQLLRDSKTKLPPLSETERVLYGLIKSKQNLGIWTADTKRDT-GLQTTVVTKTLKSL 65
Query: 211 QA*NLIKEVASVKHKH---KKIYMAVEFEPSKEISGGEWYQDG 330
Q NLIK+V ++ + H +KIY+AVEFEP KEISGG WY DG
Sbjct: 66 QNKNLIKDVVNIHNIHNKARKIYVAVEFEPXKEISGGSWYSDG 108
Score = 49.3 bits (116), Expect(2) = 8e-22
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTL 466
G LD I+ILR++C+N I++F V T+E I+++I+ SRVF + T+
Sbjct: 108 GSLDTDFIRILREQCLNHIERFQVATMEAIYKSIQESRVFKVECTM 153
>ref|XP_018831899.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018831900.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018831901.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
Length = 238
Score = 92.8 bits (229), Expect(2) = 8e-22
Identities = 44/99 (44%), Positives = 67/99 (67%)
Frame = +1
Query: 34 PQKRSRPDSGPPRTKLI*HESEIYELIKGREDLGTLRAELKKQAIGIPESMATKAL*SLQ 213
P KR RPDS P L HE +Y+LI+ ++D+ ++K++ +P+++ TK+L SLQ
Sbjct: 9 PLKRKRPDSNTPSGSLTEHERLLYDLIRSKQDMAIWTRDMKRET-NLPDNVVTKSLKSLQ 67
Query: 214 A*NLIKEVASVKHKHKKIYMAVEFEPSKEISGGEWYQDG 330
LIKEV ++++K +K Y+A EFEPS EI+GG WY +G
Sbjct: 68 TKKLIKEVVNIQNKGRKHYIATEFEPSMEITGGTWYAEG 106
Score = 38.5 bits (88), Expect(2) = 8e-22
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 329 GELDVPLIKILRQKCMNRIKKFTVTTVEKIWEAIRGSRVFNKDVTLQ 469
G LD I L++ C+ I + VTT+E I + IR SR FN + T Q
Sbjct: 106 GNLDTEFINFLKKHCVKIIYEQKVTTLEGILDTIRRSRAFNVEFTSQ 152