BLASTX nr result

ID: Ophiopogon23_contig00036456 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00036456
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263638.1| actin-related protein 2/3 complex subunit 2A...    62   3e-08
gb|ONK81370.1| uncharacterized protein A4U43_C01F28320 [Asparagu...    60   7e-08
ref|XP_024020163.1| actin-related protein 2/3 complex subunit 2A...    56   5e-06
gb|PON83800.1| Actin-related protein 2/3 complex subunit [Trema ...    56   5e-06
gb|EXB56440.1| Actin-related protein 2/3 complex subunit 2 [Moru...    56   6e-06

>ref|XP_020263638.1| actin-related protein 2/3 complex subunit 2A-like [Asparagus
           officinalis]
          Length = 240

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 422 FQEFVEARRTPGLNNAPLCTWSPTPPL 502
           FQEFVEARRTPGLN+APLCTWSPTPPL
Sbjct: 111 FQEFVEARRTPGLNSAPLCTWSPTPPL 137


>gb|ONK81370.1| uncharacterized protein A4U43_C01F28320 [Asparagus officinalis]
          Length = 214

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +2

Query: 416 LLFQEFVEARRTPGLNNAPLCTWSPTPPL 502
           L+ QEFVEARRTPGLN+APLCTWSPTPPL
Sbjct: 83  LIPQEFVEARRTPGLNSAPLCTWSPTPPL 111


>ref|XP_024020163.1| actin-related protein 2/3 complex subunit 2A [Morus notabilis]
          Length = 323

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +2

Query: 425 QEFVEARRTPGLNNAPLCTWSPTPPL 502
           QEFVEARRT GLNNAPLC WSPTPPL
Sbjct: 195 QEFVEARRTAGLNNAPLCLWSPTPPL 220


>gb|PON83800.1| Actin-related protein 2/3 complex subunit [Trema orientalis]
          Length = 325

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +2

Query: 425 QEFVEARRTPGLNNAPLCTWSPTPPL 502
           QEFVEARRT GLNNAPLC WSPTPPL
Sbjct: 197 QEFVEARRTAGLNNAPLCLWSPTPPL 222


>gb|EXB56440.1| Actin-related protein 2/3 complex subunit 2 [Morus notabilis]
          Length = 479

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +2

Query: 425 QEFVEARRTPGLNNAPLCTWSPTPPL 502
           QEFVEARRT GLNNAPLC WSPTPPL
Sbjct: 202 QEFVEARRTAGLNNAPLCLWSPTPPL 227


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