BLASTX nr result

ID: Ophiopogon23_contig00036273 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00036273
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   143   4e-36
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          98   3e-20
gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    85   6e-18
gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagu...    79   1e-13
gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagu...    76   1e-12
gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagu...    72   1e-11
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    73   1e-11
ref|XP_020272188.1| uncharacterized protein LOC109847370 [Aspara...    67   9e-10

>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  143 bits (360), Expect = 4e-36
 Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
 Frame = -3

Query: 550 LKSSFDTSGGLVKAGTAFFKVPARHDRERPILFGRVXXXXXXXXXXXXXXELPQFSQYGT 371
           +KSSF ++  +  A  AF+KVP++   ++ I FGRV               +PQF  +  
Sbjct: 415 IKSSFTSNEEVEDAQKAFYKVPSKRKGQKLIQFGRVKPEQLKRGSSEEDDGVPQFHYHEP 474

Query: 370 KPRRMMENMGYDFRRKEGLNFGRGRRTLIR-SFVPEGKKPDYYNKTGRGLGYVTTPVSSE 194
              ++M+ MGY+F  K GLNFG+GRRT +R S  PEGK  DYY+KT  GLGYVTTP +SE
Sbjct: 475 NSIQLMKRMGYNFNEKRGLNFGKGRRTPVRMSLAPEGKPQDYYHKTRSGLGYVTTPSASE 534

Query: 193 DEPEECMYCDHXXXXXXXXXXXSVGAVFRNLSVNMVS-ANPRDAEDEEEELIQSTNDPWI 17
           DE    +  +H           SVG  F++L+VNM S ++P +    +EELI+ T+DPWI
Sbjct: 535 DEISNYLGQNHSSRISSCESDVSVGLFFKSLTVNMTSTSHPDEDAGGDEELIEFTDDPWI 594

Query: 16  KRLN 5
           KRLN
Sbjct: 595 KRLN 598


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = -3

Query: 280 SFVPEGKKPDYYNKTGRGLGYVTTPVSSEDEPEECMYCDHXXXXXXXXXXXSVGAVFRNL 101
           S  PEGK PDYY KTGRG+GYVT P +SE+E    +  DH           S+G  F+NL
Sbjct: 2   SLTPEGKPPDYYQKTGRGMGYVTPPPASENEISNYLRHDHSSGISSYESDVSIGPFFKNL 61

Query: 100 SVNMVSANPRDAE-DEEEELIQSTNDPWIKRLN 5
           +VNMVS +  D +  ++EEL++STNDPWIKRLN
Sbjct: 62  TVNMVSTSHLDEDAGDDEELMESTNDPWIKRLN 94


>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 85.1 bits (209), Expect = 6e-18
 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
 Frame = -3

Query: 358 MMENMGYDFRRKEGLNFGRGRRTLIRS-FVPEGKKPDYYNKTGRGLGYVTTPV---SSED 191
           +M+ +GYDF RKEGLNFG+GR+  I+  +VPEGK  DYY+KT RGLGY + P+       
Sbjct: 4   LMKKIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGYESPPLIWCFEAT 63

Query: 190 EPEECMYCDHXXXXXXXXXXXSVGAVFRNLSVNMVSANPRDAEDEEE 50
           E  E  + +            S GAVF+ L +NM SA P + +++ +
Sbjct: 64  EESEGSFTNSSSESNYWDSDVSTGAVFKELMINMTSAQPIETQEDNQ 110


>gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagus officinalis]
          Length = 427

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
 Frame = -3

Query: 358 MMENMGYDFRRKEGLNFGRGRRTLIR-SFVPEGKKPDYYNKTGRGLGYVTTPVS-----S 197
           MM +MGYD  R EGLN+GRGR+T+I+ ++VP+GK  +Y+N+T RGLGY ++        +
Sbjct: 1   MMSDMGYDLTRLEGLNYGRGRKTVIKPAYVPKGKPSNYFNRTRRGLGYSSSSSDLCFYVN 60

Query: 196 EDEPEECMYCDHXXXXXXXXXXXSVGAVFRNLSVNMVSANPRDAEDEEEELIQSTNDPWI 17
           ED    C   D            SV  +F  L+VNM + +P  AE  E+E +   ++ W 
Sbjct: 61  EDSDYACS-GDQSSTTSAWDSDVSVRDLFDGLTVNMATVDP--AEMAEDEQLPLYDETWD 117

Query: 16  KRLNA 2
           + +NA
Sbjct: 118 RHVNA 122


>gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagus officinalis]
          Length = 1510

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
 Frame = -3

Query: 385  SQYGTKPRRMMENMGYDFRRKEGLNFGRGRRTLIRS-FVPEGKKPDYYNKTGRGLGYVTT 209
            S+Y  + R++ME  GYDF   EGL F RG R   ++ +VP+GK  DYY K GRGLGYV++
Sbjct: 1163 SKYSPEARKLMEKQGYDFTLGEGLYFDRGPRNPAKAVYVPKGKPEDYY-KYGRGLGYVSS 1221

Query: 208  PVSSE----DEPEECMYCDHXXXXXXXXXXXSVGAVFRNLSVNMVSANPRDAEDEEEELI 41
                     D+        +           S+G VF+ L  NM +A+P   ED+++  +
Sbjct: 1222 DDECGWQIIDQIANKAKKGYSPDASEWDSDTSLGEVFKTLMSNMATADPSTMEDDDQ--M 1279

Query: 40   QSTNDPWIKRLN 5
             +  DPW+  LN
Sbjct: 1280 PTWEDPWVHHLN 1291


>gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagus officinalis]
          Length = 254

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
 Frame = -3

Query: 394 PQFSQYGTKPRRMMENMGYDFRRKEGLNFGRGRRTLIR-SFVPEGKKPDYYNKTGRGLGY 218
           P   +Y  K R ++E  GYDF   EGL FGRG R   R ++VP+GK  DYY    RGLGY
Sbjct: 76  PHLFRYDAKARDLVEKYGYDFTLGEGLFFGRGPRVPPRLAYVPKGKPDDYYRHK-RGLGY 134

Query: 217 VTTPVSSEDEPEECMYC-----------DHXXXXXXXXXXXSVGAVFRNLSVNMVSANPR 71
           V+   SS+DE   C +             +           S+G +F+ L  NMV+ +P 
Sbjct: 135 VS---SSDDE---CCWQVIDQIANKARKGYSSDSSAWGSDASLGEMFKKLMSNMVTVDPT 188

Query: 70  DAEDEEEELIQSTNDPWIKRLN 5
             E++++  + +  DPW+  LN
Sbjct: 189 TIEEDDQ--MPTWKDPWVHHLN 208


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
 Frame = -3

Query: 385 SQYGTKPRRMMENMGYDFRRKEGLNFGRGRRTLIR-SFVPEGKKPDYYNKTGRGLGYVTT 209
           S+Y  + R++ME  GYDF   EGL F RG R   + ++VP+GK  DYY K  RGLGY + 
Sbjct: 300 SKYSPEARKLMEKQGYDFTLGEGLYFDRGPRIPAKAAYVPKGKPDDYY-KFRRGLGYES- 357

Query: 208 PVSSEDE--------PEECMYCDHXXXXXXXXXXXSVGAVFRNLSVNMVSANPRDAEDEE 53
             SSEDE          E     +           S+G  F+ L VNM +A+P   E+++
Sbjct: 358 --SSEDEYCWLINNQSSEQYKDGYPSDSSEWDSDTSLGEAFKALMVNMATADPSTMENDD 415

Query: 52  EELIQSTNDPWIKRLN 5
           +  + +  DPWI  LN
Sbjct: 416 Q--MPTWEDPWIHHLN 429


>ref|XP_020272188.1| uncharacterized protein LOC109847370 [Asparagus officinalis]
          Length = 611

 Score = 67.4 bits (163), Expect = 9e-10
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = -3

Query: 364 RRMMENMGYDFRRKEGLNFGRGRRTLIRSFVPEGKKPDYYNKTGRGLGYVTTPV 203
           RR+M+ +GY F    GLNFG+G+RT +  FVP+GK  +YY+KT +GLGYV+ P+
Sbjct: 2   RRIMQKIGYYFSNAGGLNFGKGQRTPLAPFVPKGKPDNYYDKTRKGLGYVSPPL 55


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