BLASTX nr result

ID: Ophiopogon23_contig00035252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00035252
         (862 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008785882.1| PREDICTED: F-box/kelch-repeat protein At5g43...    42   3e-06

>ref|XP_008785882.1| PREDICTED: F-box/kelch-repeat protein At5g43190-like [Phoenix
           dactylifera]
          Length = 386

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +2

Query: 170 FSFDGKLLLVGGMEELGAIVGIGIWELDWGRLE 268
           F  +  L LVGG+EE+G +  +GIWELDW + E
Sbjct: 242 FDLEHCLFLVGGVEEVGCMARVGIWELDWPKKE 274



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 58  LVYCSGSSPDRLLTFDPVGGRWQVSDVDFPATRSLHL 168
           L+      PD LLTFDP+GG W + DV  P     H+
Sbjct: 205 LLLVLSQGPDHLLTFDPIGGDWNLIDVAMPPVVCSHI 241


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