BLASTX nr result

ID: Ophiopogon23_contig00035103 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00035103
         (613 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK81956.1| uncharacterized protein A4U43_C01F34640 [Asparagu...    69   2e-11

>gb|ONK81956.1| uncharacterized protein A4U43_C01F34640 [Asparagus officinalis]
          Length = 140

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 59/164 (35%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
 Frame = +3

Query: 33  MDGEMVIESLDSLWFFSNIL-SHSXXXXXXXXKIQLKSDPVEP------PEILVKPVEAR 191
           MD   +I+SLDSLWF SN+L S S        ++Q  + PV+P      PEI   P EA 
Sbjct: 1   MDDAKIIDSLDSLWFSSNVLLSPSPKPTEAAPQLQPVAQPVDPNPTESPPEISADPSEAM 60

Query: 192 KESEEKQMPESKGFEISLGSHEVTELAQXXXXXXXXXXXXXXXXXFCEEEMSCLVRSALL 371
           KE E   + + +  +   G+                         F +EEM  +  S L 
Sbjct: 61  KEPEISPVKKKRSDDDGDGTRR------------------RKPNEFHKEEMISMA-STLT 101

Query: 372 KHQH---GYRHGCGVMPLAASGGDLAMKEHLKSWAHA-VACTVK 491
           KHQ+    YR G       A+G DLAMKE L+SWA A VACTV+
Sbjct: 102 KHQNYCCNYRCGAN-----AAGDDLAMKEQLRSWARAVVACTVE 140


Top