BLASTX nr result
ID: Ophiopogon23_contig00035065
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00035065
(625 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX61216.1| putative TIR-NBS-LRR resistance protein, partial ... 60 5e-07
ref|XP_013020617.1| zinc finger protein Byr3 [Schizosaccharomyce... 58 7e-07
emb|CCA29197.1| gag-pol polyprotein, partial [Small ruminant len... 58 8e-07
emb|CCA29195.1| gag-pol polyprotein, partial [Small ruminant len... 58 1e-06
emb|CCA29194.1| gag-pol polyprotein, partial [Small ruminant len... 58 1e-06
ref|XP_013023182.1| zinc finger protein Byr3 [Schizosaccharomyce... 57 1e-06
gb|AEF12564.1| gag protein, partial [Caprine arthritis encephali... 57 2e-06
ref|NP_593680.1| zinc finger protein Byr3 [Schizosaccharomyces p... 57 2e-06
gb|AEF12565.1| gag protein, partial [Caprine arthritis encephali... 56 5e-06
ref|XP_020252251.1| uncharacterized protein LOC109829598 [Aspara... 57 6e-06
ref|XP_003957165.1| hypothetical protein KAFR_0D03820 [Kazachsta... 55 7e-06
ref|XP_010784830.1| PREDICTED: cellular nucleic acid-binding pro... 55 7e-06
ref|XP_020785346.1| cellular nucleic acid-binding protein isofor... 55 7e-06
ref|XP_020785345.1| cellular nucleic acid-binding protein isofor... 55 8e-06
emb|CCA29192.1| gag-pol polyprotein, partial [Small ruminant len... 55 8e-06
ref|XP_010784828.1| PREDICTED: cellular nucleic acid-binding pro... 55 8e-06
ref|XP_010784826.1| PREDICTED: cellular nucleic acid-binding pro... 55 8e-06
>gb|PNX61216.1| putative TIR-NBS-LRR resistance protein, partial [Trifolium
pratense]
Length = 322
Score = 59.7 bits (143), Expect = 5e-07
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = -3
Query: 560 RLHCFRCGDKDHMARDCRN---GILCYNCRRIGHYAATCRSP---PSSRRYHAHRPSTR 402
+L C++CG++ H A DCRN I CYNC++ GHYA CR+P PS+ RP+ +
Sbjct: 231 KLTCYKCGEEGHYASDCRNPEVAITCYNCQKPGHYARDCRAPKATPSASTTQGARPTAK 289
>ref|XP_013020617.1| zinc finger protein Byr3 [Schizosaccharomyces octosporus yFS286]
gb|EPX70635.1| zinc finger protein Byr3 [Schizosaccharomyces octosporus yFS286]
Length = 175
Score = 57.8 bits (138), Expect = 7e-07
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = -3
Query: 602 LPQQAKPHPFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRSPPSSRRYH 423
+ +++ P + + C+ CG+ H ARDC G +CYNC + GH A+ C P + +
Sbjct: 1 MEMESQAAPSYPRAGFRCYNCGENGHQARDCTKGAICYNCNQTGHKASDCTEPQQEKTCY 60
Query: 422 A 420
A
Sbjct: 61 A 61
>emb|CCA29197.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
Length = 217
Score = 58.2 bits (139), Expect = 8e-07
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -3
Query: 608 QPLPQQAKPH-PFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRS 447
Q L Q +P P + R C+ CG + HMAR CRNGI+C+NC + GH CR+
Sbjct: 160 QLLAQALRPQRPQLTRERQKCYNCGKEGHMARQCRNGIICHNCGKRGHIQKNCRN 214
>emb|CCA29195.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
Length = 217
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = -3
Query: 608 QPLPQQAKPH-PFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCR 450
Q L Q +P P F + C+ CG + H+AR CRNGI+C+NC R GH CR
Sbjct: 160 QLLAQALRPQKPQFKGGKQKCYNCGKEGHIARQCRNGIICHNCGRRGHIQKECR 213
>emb|CCA29194.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
Length = 217
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -3
Query: 608 QPLPQQAKPH-PFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRS 447
Q L Q +P P + R C+ CG + H+AR CRNG++C+NC R GH CR+
Sbjct: 160 QLLAQALRPQKPQITRERQKCYNCGKEGHLARQCRNGVICHNCGRRGHIQKNCRN 214
>ref|XP_013023182.1| zinc finger protein Byr3 [Schizosaccharomyces cryophilus OY26]
gb|EPY51796.1| zinc finger protein Byr3 [Schizosaccharomyces cryophilus OY26]
Length = 177
Score = 57.0 bits (136), Expect = 1e-06
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = -3
Query: 593 QAKPHPFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRSPPSSRRYHA 420
+++ P F + C+ CG+ H AR+C G +CYNC + GH A+ C P + +A
Sbjct: 6 ESQAAPSFPRAGFRCYNCGENGHQARECTKGAICYNCNQTGHKASDCTEPQQEKTCYA 63
>gb|AEF12564.1| gag protein, partial [Caprine arthritis encephalitis virus]
Length = 231
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -3
Query: 608 QPLPQQAKPH-PFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRS 447
Q L Q +P P F R C+ CG + H+A+ CRNGI+C+NC + GH C+S
Sbjct: 175 QLLAQALRPQRPQFKGGRQKCYNCGKEGHLAKQCRNGIICHNCGKRGHVQKDCKS 229
>ref|NP_593680.1| zinc finger protein Byr3 [Schizosaccharomyces pombe]
sp|P36627.1|BYR3_SCHPO RecName: Full=Cellular nucleic acid-binding protein homolog
gb|AAB23116.1| human cellular nucleic acid binding protein (CNBP) homolog
[Schizosaccharomyces pombe]
emb|CAA93542.1| zinc finger protein Byr3 [Schizosaccharomyces pombe]
Length = 179
Score = 56.6 bits (135), Expect = 2e-06
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -3
Query: 602 LPQQAKPHPFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRSPPSSRRYH 423
+PQ +P P C+ CG+ H AR+C G +CYNC + GH A+ C P + +
Sbjct: 9 VPQTTRPGP-------RCYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCY 61
Query: 422 A 420
A
Sbjct: 62 A 62
>gb|AEF12565.1| gag protein, partial [Caprine arthritis encephalitis virus]
Length = 231
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -3
Query: 608 QPLPQQAKPH-PFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRS 447
Q L Q +P P R C+ CG + H+A+ CRNGI+C+NC R GH CRS
Sbjct: 175 QLLAQALRPQRPQNKGGRQKCYNCGKEGHLAKQCRNGIICHNCGRRGHIQKDCRS 229
>ref|XP_020252251.1| uncharacterized protein LOC109829598 [Asparagus officinalis]
Length = 343
Score = 56.6 bits (135), Expect = 6e-06
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = -3
Query: 623 SPSHH--QPLPQQAKPHPFFSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCR 450
SP H P++ F +RL CFRCG HMA+DCR+ I+C+ C+ +GH A CR
Sbjct: 101 SPLSHLKNSAPRRFLSANFVRRNRL-CFRCGGSKHMAKDCRDPIVCFRCQEVGHEARNCR 159
Query: 449 S 447
S
Sbjct: 160 S 160
>ref|XP_003957165.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
emb|CCF58030.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
Length = 159
Score = 54.7 bits (130), Expect = 7e-06
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = -3
Query: 563 SRLHCFRCGDKDHMARDCRNG-ILCYNCRRIGHYAATCRSPPSSR 432
SRL C++CG +HMA+DCR+ + CY C R GH A C + P+ +
Sbjct: 97 SRLSCYKCGGPNHMAKDCRSAEVKCYTCGRFGHVAKDCSADPNEK 141
>ref|XP_010784830.1| PREDICTED: cellular nucleic acid-binding protein isoform X3
[Notothenia coriiceps]
Length = 185
Score = 55.1 bits (131), Expect = 7e-06
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = -3
Query: 557 LHCFRCGDKDHMARDC-RNGILCYNCRRIGHYAATCRSPPSSRR---YHAHRP 411
+ C+RCGD+ HMARDC + CYNC R GH + C+ P R Y+ ++P
Sbjct: 72 MFCYRCGDQGHMARDCDQTEDACYNCHRSGHISRDCKEPKKEREQLCYNCNKP 124
>ref|XP_020785346.1| cellular nucleic acid-binding protein isoform X2 [Boleophthalmus
pectinirostris]
Length = 164
Score = 54.7 bits (130), Expect = 7e-06
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 557 LHCFRCGDKDHMARDCRN-GILCYNCRRIGHYAATCRSPPSSR 432
+ C+RCGD+ HMARDC CYNCRR GH + C+ P R
Sbjct: 39 MFCYRCGDQGHMARDCEQVEDSCYNCRRSGHISRDCKEPKKER 81
>ref|XP_020785345.1| cellular nucleic acid-binding protein isoform X1 [Boleophthalmus
pectinirostris]
Length = 166
Score = 54.7 bits (130), Expect = 8e-06
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 557 LHCFRCGDKDHMARDCRN-GILCYNCRRIGHYAATCRSPPSSR 432
+ C+RCGD+ HMARDC CYNCRR GH + C+ P R
Sbjct: 41 MFCYRCGDQGHMARDCEQVEDSCYNCRRSGHISRDCKEPKKER 83
>emb|CCA29192.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
Length = 217
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 608 QPLPQQAKPHPF-FSPSRLHCFRCGDKDHMARDCRNGILCYNCRRIGHYAATCRS 447
Q L Q +P R C+ CG + H+AR CRNGI+C+NC + GH CRS
Sbjct: 160 QLLAQALRPQQLQIKGERQKCYNCGKEGHLARQCRNGIICHNCGKRGHIQKECRS 214
>ref|XP_010784828.1| PREDICTED: cellular nucleic acid-binding protein isoform X2
[Notothenia coriiceps]
Length = 195
Score = 55.1 bits (131), Expect = 8e-06
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = -3
Query: 557 LHCFRCGDKDHMARDC-RNGILCYNCRRIGHYAATCRSPPSSRR---YHAHRP 411
+ C+RCGD+ HMARDC + CYNC R GH + C+ P R Y+ ++P
Sbjct: 70 MFCYRCGDQGHMARDCDQTEDACYNCHRSGHISRDCKEPKKEREQLCYNCNKP 122
>ref|XP_010784826.1| PREDICTED: cellular nucleic acid-binding protein isoform X1
[Notothenia coriiceps]
ref|XP_010784827.1| PREDICTED: cellular nucleic acid-binding protein isoform X1
[Notothenia coriiceps]
Length = 197
Score = 55.1 bits (131), Expect = 8e-06
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = -3
Query: 557 LHCFRCGDKDHMARDC-RNGILCYNCRRIGHYAATCRSPPSSRR---YHAHRP 411
+ C+RCGD+ HMARDC + CYNC R GH + C+ P R Y+ ++P
Sbjct: 72 MFCYRCGDQGHMARDCDQTEDACYNCHRSGHISRDCKEPKKEREQLCYNCNKP 124