BLASTX nr result

ID: Ophiopogon23_contig00035008 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00035008
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251631.1| tRNA(adenine(34)) deaminase, chloroplastic [...   130   2e-32
ref|XP_008782423.1| PREDICTED: tRNA(adenine(34)) deaminase, chlo...    61   3e-08
ref|XP_009380339.1| PREDICTED: tRNA(adenine(34)) deaminase, chlo...    59   3e-07

>ref|XP_020251631.1| tRNA(adenine(34)) deaminase, chloroplastic [Asparagus officinalis]
 gb|ONK81336.1| tRNA(adenine(34)) deaminase, chloroplastic [Asparagus officinalis]
          Length = 1240

 Score =  130 bits (326), Expect = 2e-32
 Identities = 72/114 (63%), Positives = 91/114 (79%)
 Frame = -1

Query: 375 VDEKFENQTNSSKIHSSSTERVNNSNSSLRIRADDREEHSTSVVNLAHGIRDNSRVESKW 196
           +++K+EN++NSSKIH+SSTER +NS +SLRIRADDRE+H TS  NL     D SRVES+ 
Sbjct: 380 INQKYENRSNSSKIHASSTERDSNSKNSLRIRADDREQHLTS--NLVCRSTDESRVESQL 437

Query: 195 DSSVSELRMSDTERVSNLQEVSTIRTENESETSASVLVRDEVDNRQRKILIGES 34
           +SSVSE R  D ERVS+LQ+V+TIR ENE ETS+SV++ DE DNRQ+  LI ES
Sbjct: 438 NSSVSEFR-RDEERVSDLQQVATIRPENERETSSSVMIHDERDNRQKSNLIEES 490


>ref|XP_008782423.1| PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Phoenix
            dactylifera]
          Length = 1393

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
 Frame = -1

Query: 375  VDEKFENQTNSSKIHSSS----------TERVNNSNSSLRIRADDREEHSTSVVNLAHGI 226
            ++E+F  Q++S + H             TER +N+      R + R E  +  VN  +  
Sbjct: 658  INEQFMQQSSSRRTHERDAQNFEVSRRDTERASNTQEIYNTRYNTRVESES--VNCEY-- 713

Query: 225  RDNSRVESKWDSSVSELRMSDTERVSNLQEVSTIRTENESETSASVLVRDEVDNRQRKIL 46
              +SR +S  ++++SE   +D E  S  QE+S +R EN    S+S+LVRD++  +QR  L
Sbjct: 714  --SSRRDSAKETNISEYSRNDNEMASTSQEISNMRIENRRGNSSSMLVRDKL-GKQRSTL 770

Query: 45   IGESLQSARTQIG 7
             G+S Q  + Q+G
Sbjct: 771  TGDSSQPTKGQMG 783


>ref|XP_009380339.1| PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic-like [Musa
            acuminata subsp. malaccensis]
          Length = 1311

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 56/185 (30%)
 Frame = -1

Query: 396  QVTNKIEVDEKFENQTNSSKIHSSSTERVNNSNSSLRIRADDREEHSTSVVNLAHGI--- 226
            Q+ +K+E+ +++ENQ + S+ H   TE  ++S S LR R +DR ++STS++N  H +   
Sbjct: 499  QIIDKMELGKQYENQVDVSRPHVRGTESASSSQSLLRSRINDRVDYSTSIMNPIHQVEKH 558

Query: 225  -----------------------------RDNSRV------------------------E 205
                                         +D+ +V                        E
Sbjct: 559  QTQSESQYTYQYSPKRESEKAMCTSELPRKDSGKVSTAQVMYNADIQNELNNCQYSSRRE 618

Query: 204  SKWDSSVSELRMSDTERVSNLQEVSTIRTENESETSASVLVRDEVDNRQRKILIGESLQS 25
             + D+ +SE  ++D +R  N Q +S +R  N  E S+ ++V+D  D ++   L GES Q 
Sbjct: 619  CETDARMSENAVTDIQRNFNSQNISNMRIRNSKERSSLLMVQD--DKKKLGTLTGESSQL 676

Query: 24   ARTQI 10
               +I
Sbjct: 677  INQEI 681


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