BLASTX nr result

ID: Ophiopogon23_contig00034566 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00034566
         (782 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011494063.1| PREDICTED: mediator of RNA polymerase II tra...    71   3e-10
ref|XP_014219549.1| inner centromere protein A [Copidosoma flori...    70   7e-10
ref|XP_014224170.1| trichohyalin isoform X3 [Trichogramma pretio...    66   1e-08
ref|XP_023317311.1| trichohyalin isoform X2 [Trichogramma pretio...    66   1e-08
ref|XP_014224167.1| trichohyalin isoform X1 [Trichogramma pretio...    66   1e-08

>ref|XP_011494063.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15
           [Ceratosolen solmsi marchali]
          Length = 1197

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 34/62 (54%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 PYVDMTALTAKLQQDLHRLENEMNNFVSQYTMRMTASNSGTVGKELEHMADNIRTKINKL 9
           P+VD+TA  ++LQQDL+RL+ E+NNF + YTMR+T++NS TV  E E  A+ +R +IN L
Sbjct: 500 PHVDLTAAMSRLQQDLNRLQTEVNNF-NMYTMRLTSANSVTVVGEAERQAEQLRERINNL 558

Query: 8   CE 3
           CE
Sbjct: 559 CE 560


>ref|XP_014219549.1| inner centromere protein A [Copidosoma floridanum]
          Length = 1401

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 32/68 (47%), Positives = 54/68 (79%)
 Frame = -1

Query: 206 QNNKFSPYVDMTALTAKLQQDLHRLENEMNNFVSQYTMRMTASNSGTVGKELEHMADNIR 27
           Q+++ + +VD+TA T++LQQ+LHR++NE+NNF + ++MR+TA+NS +V  E E  A+++R
Sbjct: 532 QHHQLNAHVDLTAATSRLQQELHRIQNEINNF-NTHSMRLTAANSQSVIGEAERQAESLR 590

Query: 26  TKINKLCE 3
             I+ LCE
Sbjct: 591 QSISNLCE 598


>ref|XP_014224170.1| trichohyalin isoform X3 [Trichogramma pretiosum]
          Length = 1429

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 PYVDMTALTAKLQQDLHRLENEMNNFVSQYTMRMTASNSGTVGKELEHMADNIRTKINKL 9
           P+VD+TA   +LQQDL+RL++E+N+F + Y+MR+T+SNS  V +E E  A+ IR +++ L
Sbjct: 559 PHVDLTAAVGRLQQDLNRLQSEVNSF-NAYSMRLTSSNSQNVVREAEREAETIRERLSNL 617

Query: 8   CE 3
           CE
Sbjct: 618 CE 619


>ref|XP_023317311.1| trichohyalin isoform X2 [Trichogramma pretiosum]
          Length = 1430

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 PYVDMTALTAKLQQDLHRLENEMNNFVSQYTMRMTASNSGTVGKELEHMADNIRTKINKL 9
           P+VD+TA   +LQQDL+RL++E+N+F + Y+MR+T+SNS  V +E E  A+ IR +++ L
Sbjct: 560 PHVDLTAAVGRLQQDLNRLQSEVNSF-NAYSMRLTSSNSQNVVREAEREAETIRERLSNL 618

Query: 8   CE 3
           CE
Sbjct: 619 CE 620


>ref|XP_014224167.1| trichohyalin isoform X1 [Trichogramma pretiosum]
 ref|XP_014224168.1| trichohyalin isoform X1 [Trichogramma pretiosum]
          Length = 1456

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 PYVDMTALTAKLQQDLHRLENEMNNFVSQYTMRMTASNSGTVGKELEHMADNIRTKINKL 9
           P+VD+TA   +LQQDL+RL++E+N+F + Y+MR+T+SNS  V +E E  A+ IR +++ L
Sbjct: 586 PHVDLTAAVGRLQQDLNRLQSEVNSF-NAYSMRLTSSNSQNVVREAEREAETIRERLSNL 644

Query: 8   CE 3
           CE
Sbjct: 645 CE 646


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