BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00034549
         (909 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    74   7e-11
ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage fact...    66   2e-08
ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage fact...    66   3e-08
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    65   6e-08
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact...    64   1e-07

>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
            homolog 4-like [Phoenix dactylifera]
          Length = 1063

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 84/322 (26%), Positives = 134/322 (41%), Gaps = 86/322 (26%)
 Frame = +3

Query: 3    SVRCGEYDHEDHELLPPHLGFERVGT--SAIAGVNDVLPLPWPSSH-----------PRT 143
            S++C +YD ++ E+ P   G  R G+  +A    + ++ +  P+ H           P  
Sbjct: 300  SMQCNKYDIDNPEVRPSRRGILRAGSPHTAATQASSMVEVEGPTHHSKSKFSRFSPPPII 359

Query: 144  GPKL-----------NSFSETVADRPSLCGFGSEWPSNCNIELTRGWP--DGEQNTETSW 284
            GP+            N+    V +R S    G+   +N N    R WP  D  Q  ++S 
Sbjct: 360  GPRKSILPLTDRFSRNTSPRRVLERASPSHSGAGRGTNQNSWFERIWPFDDVTQQVKSSM 419

Query: 285  AYNRKNECDKLHARLLKDSYGSSD--------MPMKESL----------------SSEEE 392
            A+N  N   + H+R L D+YG+          +P  + L                S EEE
Sbjct: 420  AFNLNNGYAEKHSRELIDAYGNCSGTSTSLEKLPKVQRLDVNGLASEAANIKWKNSEEEE 479

Query: 393  FVWEKMSPTF-PRKEYNS-TLFGHNT-------DLPRSNASYLGNDFGSNQYNQSADIIA 545
            +VWE MSPT   R   NS    G +T        L R +AS L +DFG + +   A  + 
Sbjct: 480  YVWEDMSPTLSDRSRRNSQPPLGRSTGSLSIRGGLTRPDASLLEHDFGRHSWPGQAQAVD 539

Query: 546  NPGCR-------------ASSDKFEDYVVSHEESMLRSQNSYHCQETLK----------- 653
            +P                + + K  D +V+  + +L SQ S+H +E  K           
Sbjct: 540  DPAYTVEDRIPLFGSAHGSRNRKNLDSIVNQNKLLLHSQGSHHTREPRKLPYVLPQSSQQ 599

Query: 654  -LSNEAQGRS--APLAATPVSP 710
             LS +A+GR+   P+AA+ ++P
Sbjct: 600  SLSPQARGRAPQMPVAASGITP 621


>ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Phoenix dactylifera]
          Length = 977

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 77/296 (26%), Positives = 109/296 (36%), Gaps = 78/296 (26%)
 Frame = +3

Query: 3    SVRCGEYDHEDHELLPPHLGFERVGTSAIAG-----------------VNDVLPLPWPSS 131
            S++C EY+ +  E+LP   G  R G+   A                  +    P P P  
Sbjct: 217  SMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIKISRPSPPPII 276

Query: 132  HPRTG--PKLNSFSETVADR-------PSLCGF----GSEWPSNCNIELTRGWPDGEQNT 272
             PR    P ++ FS   + R       PS  GF    G     N  +E  R + DG Q  
Sbjct: 277  GPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERRRPFDDGAQQI 336

Query: 273  ETSWAYNRKNECDKLHARLLKDSYG------------------------SSDMPMKESLS 380
            + S A+N  N   K  +R L D+YG                        S     K   S
Sbjct: 337  QASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVASERASRKWKNS 396

Query: 381  SEEEFVWEKMSPTFPRKEYNSTL--FGHNT-------DLPRSNASYLGNDFGSNQYNQSA 533
             EEE+VWE MSPT   +   ++L  FG +T        L R +AS L +D G   +   A
Sbjct: 397  EEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHDSGRRSWPGQA 456

Query: 534  DI---------------IANPGCRASSDKFEDYVVSHEESMLRSQNSYHCQETLKL 656
             +               +  P   + + K+ D  VS  + +   Q S+H  E  KL
Sbjct: 457  QLPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWLPPYQGSHHTHEPRKL 512


>ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
 ref|XP_008808981.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
 ref|XP_008808982.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
 ref|XP_008808983.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
          Length = 1065

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 77/296 (26%), Positives = 109/296 (36%), Gaps = 78/296 (26%)
 Frame = +3

Query: 3    SVRCGEYDHEDHELLPPHLGFERVGTSAIAG-----------------VNDVLPLPWPSS 131
            S++C EY+ +  E+LP   G  R G+   A                  +    P P P  
Sbjct: 305  SMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIKISRPSPPPII 364

Query: 132  HPRTG--PKLNSFSETVADR-------PSLCGF----GSEWPSNCNIELTRGWPDGEQNT 272
             PR    P ++ FS   + R       PS  GF    G     N  +E  R + DG Q  
Sbjct: 365  GPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERRRPFDDGAQQI 424

Query: 273  ETSWAYNRKNECDKLHARLLKDSYG------------------------SSDMPMKESLS 380
            + S A+N  N   K  +R L D+YG                        S     K   S
Sbjct: 425  QASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVASERASRKWKNS 484

Query: 381  SEEEFVWEKMSPTFPRKEYNSTL--FGHNT-------DLPRSNASYLGNDFGSNQYNQSA 533
             EEE+VWE MSPT   +   ++L  FG +T        L R +AS L +D G   +   A
Sbjct: 485  EEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHDSGRRSWPGQA 544

Query: 534  DI---------------IANPGCRASSDKFEDYVVSHEESMLRSQNSYHCQETLKL 656
             +               +  P   + + K+ D  VS  + +   Q S+H  E  KL
Sbjct: 545  QLPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWLPPYQGSHHTHEPRKL 600


>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
            homolog 4 [Elaeis guineensis]
          Length = 1070

 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 90/328 (27%)
 Frame = +3

Query: 3    SVRCGEYDHEDHELLPPHLGFERVGT--SAIAGVNDVLPLPWPSSHPRT----------- 143
            S++C EYD +  E+LP   G  R G+  +A      ++ +  P+ H ++           
Sbjct: 300  SLQCNEYDIDHPEVLPSRRGIVRTGSPLTAATRATSIVEVEGPTRHSKSKFSRFSPPPII 359

Query: 144  ------GPKLNSFSETVADR-------PSLCGFGSEWPSNCNIELTRGWP--DGEQNTET 278
                   P  + FS   + R       PS    G    +N N    R WP  D  +  ++
Sbjct: 360  GPRKSVSPPTDRFSRRTSPRRVLKRTSPSHSEAGRG--TNQNGRFERSWPCDDATEQVKS 417

Query: 279  SWAYNRKNECDKLHARLLKDSYGS--------SDMPMKESL----------------SSE 386
            S A++  +   K H+R L D+YG+          +P  + L                S E
Sbjct: 418  SMAFSLNSGYAKQHSRDLIDAYGNCRGKSTSLEKLPKVQRLDVNGIASEAATRKWKNSEE 477

Query: 387  EEFVWEKMSPTFPRKEYNSTL--FGHNT-------DLPRSNASYLGNDFGSNQYNQSADI 539
            EE+VWE MSPT   +    +    G +T        L R +AS L +DFG + +   A +
Sbjct: 478  EEYVWEDMSPTLSDRSRRKSQPPLGPSTGNLSIRGGLTRPDASLLEHDFGRHSWPGQAQL 537

Query: 540  --IANPGCR-------------ASSDKFEDYVVSHEESMLRSQNSYHCQETLK------- 653
              I +P                + + K+ D +V+  + +  SQ S+H  E  K       
Sbjct: 538  PAIDDPAYTVEDRIHFFGNAHGSMNRKYLDGIVNQHKLLADSQGSHHTHEPRKLPYMFPQ 597

Query: 654  -----LSNEAQGRSA--PLAATPVSPRL 716
                 LS   +GR++  P+AA+ ++P +
Sbjct: 598  SSQQSLSPRLRGRASQMPVAASGITPSI 625


>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like [Elaeis
            guineensis]
          Length = 1053

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 84/331 (25%), Positives = 123/331 (37%), Gaps = 92/331 (27%)
 Frame = +3

Query: 3    SVRCGEYDHEDHELLPPHLGFERVGTSAIA-----------GVNDVLPL------PWPSS 131
            S++C EY  +  E+LPP  G  R G+   A           G    L +      P P  
Sbjct: 279  SMQCNEYSIDHPEVLPPRPGAARTGSPQTAATCTTSMVEVEGPTRQLKIKISRSSPPPII 338

Query: 132  HPRTG--PKLNSFSETVADR-------PSLCGF--GSEWPSNCNIELTRGWP--DGEQNT 272
             PR    P ++ FS   + R       PS  GF  G    +N N  L R WP  D  Q  
Sbjct: 339  GPRNSISPPIDRFSRDTSPRRMLERVSPSHSGFVYGPGRGTNQNGWLERRWPFDDSAQKI 398

Query: 273  ETSWAYNRKNECDKLHARLLKDSYG------------------------SSDMPMKESLS 380
            + S A+N  N   K  +R L D+YG                        S     K   S
Sbjct: 399  QASMAFNLNNGYAKQRSRELIDAYGNYTGKSASLEKLPKVQRVDVNSVASERAARKWKNS 458

Query: 381  SEEEFVWEKMSPTFPRKEYNSTLFGHNTDLP---------RSNASYLGNDFGSNQYNQSA 533
             EEE+VWE MSPT   +   ++L      LP         R +AS L +D G   +   A
Sbjct: 459  EEEEYVWEDMSPTLSDRSRRNSLPPFGPSLPPLSTRAGLTRPDASLLDHDSGRRSWPGQA 518

Query: 534  DI---------------IANPGCRASSDKFEDYVVSHEESMLRSQNSYHCQETLK----- 653
             +               +      + + K+ D  VS  + +   Q S H  +  K     
Sbjct: 519  QLPAVGDSAFTIEDRIPVFGSAHGSMNRKYLDSTVSQNDWLPHYQGSQHMHQPRKLPFMF 578

Query: 654  -------LSNEAQGRS--APLAATPVSPRLL 719
                   LS +++GR+   P+AA+ ++P ++
Sbjct: 579  PKSAQHSLSPQSRGRAHQMPVAASGITPLVI 609