BLASTX nr result
ID: Ophiopogon23_contig00034322
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00034322
(391 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_024178707.1| uncharacterized protein LOC112184698 [Rosa c... 135 4e-41
ref|XP_022157398.1| uncharacterized protein LOC111024105 [Momord... 130 4e-41
gb|OKX69894.1| hypothetical protein AXD71_14845, partial [Lister... 145 6e-41
gb|OMO80899.1| reverse transcriptase [Corchorus capsularis] 128 2e-40
ref|XP_023913486.1| uncharacterized protein LOC112025055 [Quercu... 127 3e-39
ref|XP_017228925.1| PREDICTED: uncharacterized protein LOC108204... 149 5e-39
gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subc... 124 1e-38
ref|XP_017251760.1| PREDICTED: uncharacterized protein LOC108222... 146 4e-38
ref|XP_017233209.1| PREDICTED: uncharacterized protein LOC108207... 145 6e-38
gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group... 122 9e-38
ref|XP_015645931.1| PREDICTED: uncharacterized protein LOC434289... 123 1e-37
gb|KYP72997.1| Retrovirus-related Pol polyprotein from transposo... 135 2e-37
emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera] 144 2e-37
ref|XP_021672703.1| uncharacterized protein LOC110659149 [Hevea ... 127 4e-37
gb|KYP73641.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 137 4e-37
gb|KYP54727.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 136 6e-37
gb|ABF95761.1| retrotransposon protein, putative, Ty3-gypsy subc... 122 8e-37
emb|CAH66095.1| OSIGBa0114I04.2 [Oryza sativa] 117 1e-36
dbj|GAV79618.1| hypothetical protein CFOL_v3_23082, partial [Cep... 132 2e-36
gb|ABA98792.2| retrotransposon protein, putative, Ty3-gypsy subc... 118 2e-36
>ref|XP_024178707.1| uncharacterized protein LOC112184698 [Rosa chinensis]
Length = 1045
Score = 135 bits (341), Expect(2) = 4e-41
Identities = 61/95 (64%), Positives = 77/95 (81%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV+DFSKIA PLTRLTRK +FVW+E C+++F+ELK RL +APVL +PD G + ++
Sbjct: 834 YRRFVQDFSKIATPLTRLTRKGVKFVWSEECEQSFQELKGRLTSAPVLVLPDDSGEYVVY 893
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
SDAS +G GC+L QHG V+A AS+Q KPHE NYPT
Sbjct: 894 SDASRQGLGCVLMQHGNVIAYASRQLKPHELNYPT 928
Score = 60.1 bits (144), Expect(2) = 4e-41
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELA V+ +LKLWRHYL R +IFTDHKSL+Y
Sbjct: 927 PTHDLELAVVVLALKLWRHYLYRARCQIFTDHKSLQY 963
>ref|XP_022157398.1| uncharacterized protein LOC111024105 [Momordica charantia]
Length = 875
Score = 130 bits (328), Expect(2) = 4e-41
Identities = 57/95 (60%), Positives = 77/95 (81%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YR+F+++FS+IA PLT+LTRK+ F W+ C+ AF+ELK+RLV+APVLT+PD GG ++
Sbjct: 723 YRKFIQNFSRIAAPLTQLTRKNATFTWSSECKEAFQELKKRLVSAPVLTVPDGTGGLVVY 782
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
SDAS +G GC+L QHG+V+A AS+Q K HE NYPT
Sbjct: 783 SDASRRGLGCVLMQHGKVIAYASRQLKAHELNYPT 817
Score = 65.1 bits (157), Expect(2) = 4e-41
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+F+LKL RHYL GER+++FTDH+SLKY
Sbjct: 816 PTHDLELAAVVFALKLRRHYLYGERIQVFTDHQSLKY 852
>gb|OKX69894.1| hypothetical protein AXD71_14845, partial [Listeria monocytogenes]
Length = 244
Score = 145 bits (366), Expect = 6e-41
Identities = 68/123 (55%), Positives = 88/123 (71%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV+DF+KIA PLT+LTRK+E+F+W E C+ +F+ELK RLVTAPVL +PD QG F I
Sbjct: 92 YRRFVQDFAKIATPLTKLTRKNEKFIWNERCEESFQELKTRLVTAPVLALPDDQGNFVIF 151
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
S AS KG GC+L QHG+V+A AS+Q KPHE+ YPT I+F+ ++WR
Sbjct: 152 SGASRKGLGCVLMQHGKVIAYASRQLKPHEQKYPTHD---------MELAAIVFALNIWR 202
Query: 361 YLL 369
+ L
Sbjct: 203 HYL 205
Score = 67.0 bits (162), Expect = 1e-10
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HD+ELAA++F+L +WRHYL GER EI+TDHKSLKY
Sbjct: 185 PTHDMELAAIVFALNIWRHYLYGERCEIYTDHKSLKY 221
>gb|OMO80899.1| reverse transcriptase [Corchorus capsularis]
Length = 1087
Score = 128 bits (322), Expect(2) = 2e-40
Identities = 59/95 (62%), Positives = 75/95 (78%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV FS IA P+T+LTRK +F WT+ C+++F+ELK RL +A VL +PD GGF I+
Sbjct: 472 YRRFVEGFSSIAMPMTKLTRKGAKFEWTKECEKSFKELKERLTSANVLNVPDGSGGFTIY 531
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
SDAS KG GC+L Q+G+VVA AS+Q KP+ERNYPT
Sbjct: 532 SDASKKGLGCVLMQNGKVVAYASRQLKPYERNYPT 566
Score = 65.1 bits (157), Expect(2) = 2e-40
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+F+LK+ RHYL GE+ EIFTDHKSLKY
Sbjct: 565 PTHDLELAAVVFALKILRHYLYGEKCEIFTDHKSLKY 601
>ref|XP_023913486.1| uncharacterized protein LOC112025055 [Quercus suber]
Length = 221
Score = 127 bits (320), Expect(2) = 3e-39
Identities = 59/95 (62%), Positives = 77/95 (81%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV FS+IA PLT+LTRK+ +FVW E C+++F+ELK+RLVT PVLTIP+ GGF I+
Sbjct: 78 YRRFVEGFSRIAVPLTQLTRKNAKFVWIEECEKSFQELKQRLVTTPVLTIPNNLGGFVIY 137
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
S+AS KG GC+L Q+G+V+ AS Q K +E+NYPT
Sbjct: 138 SNASRKGLGCVLMQNGKVIPYASHQLKSYEQNYPT 172
Score = 62.0 bits (149), Expect(2) = 3e-39
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAA++F LK+W++YL GER EI+TDHKSL Y
Sbjct: 171 PTHDLELAAMVFVLKIWKNYLYGERCEIYTDHKSLNY 207
>ref|XP_017228925.1| PREDICTED: uncharacterized protein LOC108204131, partial [Daucus
carota subsp. sativus]
Length = 847
Score = 149 bits (375), Expect = 5e-39
Identities = 70/123 (56%), Positives = 94/123 (76%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV+DFS+IA P+TRLTRK E+FVWTE C+ +F+ELK+RLV+APVL++PD+QG F I+
Sbjct: 543 YRRFVQDFSRIAVPMTRLTRKEEKFVWTEKCEESFQELKKRLVSAPVLSLPDEQGNFVIY 602
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
SDAS KG GC+L QH +V+A AS+Q KPHE+ YPT L++ I+F+ +WR
Sbjct: 603 SDASHKGLGCVLMQHDKVIAYASRQLKPHEQKYPT------HDLELAA---IVFALKIWR 653
Query: 361 YLL 369
+ L
Sbjct: 654 HYL 656
Score = 68.6 bits (166), Expect = 8e-11
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAA++F+LK+WRHYL GE+ EI+TDHKSLKY
Sbjct: 636 PTHDLELAAIVFALKIWRHYLYGEKCEIYTDHKSLKY 672
>gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2174
Score = 124 bits (312), Expect(2) = 1e-38
Identities = 53/95 (55%), Positives = 76/95 (80%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ +FSKIA+P+TRL +K ++ W+E C+++F+ELK RL++AP+L +PD + GF +H
Sbjct: 1477 YRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVH 1536
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
DAS G GC+L Q G+VVA AS+Q +PHE+NYPT
Sbjct: 1537 CDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT 1571
Score = 62.8 bits (151), Expect(2) = 1e-38
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HD+ELAAV+ +LK+W HYL G R E++TDHKSLKY
Sbjct: 1570 PTHDIELAAVVHALKIWHHYLFGTRTEVYTDHKSLKY 1606
>ref|XP_017251760.1| PREDICTED: uncharacterized protein LOC108222348 [Daucus carota subsp.
sativus]
Length = 1056
Score = 146 bits (369), Expect = 4e-38
Identities = 70/123 (56%), Positives = 93/123 (75%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV+DF+KIA PLT+LTRK+E+FVW + C+R+F+ELK RLVTAPVL +PD++G F I+
Sbjct: 832 YRRFVKDFAKIATPLTKLTRKNEKFVWKDECERSFQELKERLVTAPVLALPDEKGNFVIY 891
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
SDAS KG GC+L QH RV+A AS+Q KPHE+ YPT L++ I+F+ +WR
Sbjct: 892 SDASLKGLGCVLMQHDRVIAYASRQLKPHEQKYPT------HDLELAA---IVFALKLWR 942
Query: 361 YLL 369
+ L
Sbjct: 943 HYL 945
Score = 70.5 bits (171), Expect = 2e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAA++F+LKLWRHYL GE+ EIFTDHKSLKY
Sbjct: 925 PTHDLELAAIVFALKLWRHYLYGEKCEIFTDHKSLKY 961
>ref|XP_017233209.1| PREDICTED: uncharacterized protein LOC108207260 [Daucus carota
subsp. sativus]
Length = 803
Score = 145 bits (367), Expect = 6e-38
Identities = 69/123 (56%), Positives = 93/123 (75%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV+DFS+IA P+TRLTRK E+FVWTE C+ +F+ELK+RLV+APVL++PD+Q F I+
Sbjct: 525 YRRFVQDFSRIAVPMTRLTRKEEKFVWTEKCEESFQELKKRLVSAPVLSLPDEQENFVIY 584
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
SDAS KG GC+L QH +V+A AS+Q KPHE+ YPT L++ I+F+ +WR
Sbjct: 585 SDASHKGLGCVLMQHDKVIAYASRQLKPHEQKYPT------HDLELAA---IVFALKIWR 635
Query: 361 YLL 369
+ L
Sbjct: 636 HYL 638
Score = 68.6 bits (166), Expect = 8e-11
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAA++F+LK+WRHYL GE+ EI+TDHKSLKY
Sbjct: 618 PTHDLELAAIVFALKIWRHYLYGEKCEIYTDHKSLKY 654
>gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAQ56471.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1735
Score = 122 bits (306), Expect(2) = 9e-38
Identities = 52/95 (54%), Positives = 76/95 (80%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ +FSKIA+P+TRL +K ++ W+E C+++F+ELK RL++AP+L +PD + GF ++
Sbjct: 1038 YRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVY 1097
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
DAS G GC+L Q G+VVA AS+Q +PHE+NYPT
Sbjct: 1098 CDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT 1132
Score = 62.4 bits (150), Expect(2) = 9e-38
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+ +LK+W HYL G R E++TDHKSLKY
Sbjct: 1131 PTHDLELAAVVHALKIWCHYLFGTRTEVYTDHKSLKY 1167
>ref|XP_015645931.1| PREDICTED: uncharacterized protein LOC4342891 [Oryza sativa
Japonica Group]
Length = 1858
Score = 123 bits (308), Expect(2) = 1e-37
Identities = 53/95 (55%), Positives = 76/95 (80%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ +FSKIA+P+TRL +K ++ W+E C+++F+ELK RLV+AP+L +PD + GF ++
Sbjct: 505 YRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLVSAPILILPDPKKGFQVY 564
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
DAS G GC+L Q G+VVA AS+Q +PHE+NYPT
Sbjct: 565 CDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT 599
Score = 61.2 bits (147), Expect(2) = 1e-37
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+ +LK+WR YL G R E++TDHKSLKY
Sbjct: 598 PTHDLELAAVVHALKIWRDYLSGTRTEVYTDHKSLKY 634
>gb|KYP72997.1| Retrovirus-related Pol polyprotein from transposon 17.6, partial
[Cajanus cajan]
Length = 204
Score = 135 bits (340), Expect = 2e-37
Identities = 64/123 (52%), Positives = 87/123 (70%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ FSKI PLT+LTRK + F+WT+AC+R+FEELKRRL T+PVL +PD F ++
Sbjct: 72 YRRFIEGFSKIVAPLTQLTRKEQPFIWTDACERSFEELKRRLTTSPVLVLPDSGEPFDVY 131
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
DAS +G GC+L QHG+VVA AS+Q K HERNYPT L++ ++F+ +W+
Sbjct: 132 CDASHQGLGCVLMQHGKVVAYASRQLKNHERNYPT------HDLELAA---VVFALKIWQ 182
Query: 361 YLL 369
+ L
Sbjct: 183 HYL 185
Score = 60.5 bits (145), Expect = 2e-08
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+F+LK+W+HYL G +F+DHKSLKY
Sbjct: 165 PTHDLELAAVVFALKIWQHYLYGAWFSVFSDHKSLKY 201
>emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera]
Length = 855
Score = 144 bits (363), Expect = 2e-37
Identities = 68/123 (55%), Positives = 90/123 (73%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ FSKIA PLTRLT+K +F W+ C+R+F+ELK+RLVTAP+LTIP GGF ++
Sbjct: 235 YRRFIEGFSKIALPLTRLTQKGVKFEWSNDCERSFQELKKRLVTAPILTIPSXSGGFVVY 294
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
SDAS +G GC+L QH +VVACASKQ KP+ERNYPT L++ ++F+ +WR
Sbjct: 295 SDASHQGWGCVLMQHXKVVACASKQLKPYERNYPT------HDLELAA---VVFALKIWR 345
Query: 361 YLL 369
+ L
Sbjct: 346 HFL 348
Score = 67.8 bits (164), Expect = 1e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+F+LK+WRH+L GE EIFTDHKSLKY
Sbjct: 328 PTHDLELAAVVFALKIWRHFLFGETYEIFTDHKSLKY 364
>ref|XP_021672703.1| uncharacterized protein LOC110659149 [Hevea brasiliensis]
Length = 864
Score = 127 bits (319), Expect(2) = 4e-37
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRFV+DFS IA PLT+L RKS +F WTE CQ +F++LK L +APVLT+P GGF +H
Sbjct: 581 YRRFVQDFSIIAAPLTKLLRKSAKFEWTEECQESFDKLKTCLTSAPVLTLPSGVGGFVVH 640
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
SDA KG GC+L QH +V+A AS+Q +PHE NYPT
Sbjct: 641 SDAFHKGLGCILIQHEKVIAYASRQLRPHELNYPT 675
Score = 55.5 bits (132), Expect(2) = 4e-37
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P H+LEL AV+F+LK RHYL GE +I+TDHKSL Y
Sbjct: 674 PTHELELVAVVFALKTLRHYLYGETCQIYTDHKSLNY 710
>gb|KYP73641.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 292
Score = 137 bits (344), Expect = 4e-37
Identities = 64/123 (52%), Positives = 88/123 (71%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF++ FSKI PLT+LTRK + F+WT+AC+++FEELKRRL T+PVL +PD F ++
Sbjct: 166 YRRFIKGFSKIVAPLTQLTRKEQPFIWTDACEQSFEELKRRLTTSPVLVLPDSSEPFDVY 225
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
DAS +G GC+L QHG+VVA AS+Q K HERNYPT L++ ++F+ +WR
Sbjct: 226 CDASHQGLGCVLMQHGKVVAYASRQLKNHERNYPT------HDLELAA---VVFALKIWR 276
Query: 361 YLL 369
+ L
Sbjct: 277 HYL 279
Score = 58.9 bits (141), Expect = 1e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKS 380
P HDLELAAV+F+LK+WRHYL G R +F+DHKS
Sbjct: 259 PTHDLELAAVVFALKIWRHYLYGARFNVFSDHKS 292
>gb|KYP54727.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 282
Score = 136 bits (342), Expect = 6e-37
Identities = 65/123 (52%), Positives = 87/123 (70%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ FSKIA PLT+LTRK + F+WT+AC+R+FEELKRRL T+PVL +PD F ++
Sbjct: 130 YRRFIEGFSKIAAPLTQLTRKEQPFIWTDACERSFEELKRRLTTSPVLVLPDSGEPFNVY 189
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPTMTWSWQQSFSLSSCGGIIFSASVWR 360
DAS +G GC+L QHG+VVA AS+Q K HER YPT L++ ++F+ +WR
Sbjct: 190 CDASHQGLGCVLMQHGKVVAYASRQLKNHERTYPT------HDLELAA---VVFALKIWR 240
Query: 361 YLL 369
+ L
Sbjct: 241 HYL 243
Score = 65.1 bits (157), Expect = 7e-10
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+F+LK+WRHYL G R +F+DHKSLKY
Sbjct: 223 PTHDLELAAVVFALKIWRHYLYGARFSVFSDHKSLKY 259
>gb|ABF95761.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1269
Score = 122 bits (307), Expect(2) = 8e-37
Identities = 52/95 (54%), Positives = 76/95 (80%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ +FSKIA+P+TRL +K ++ W+E C+++F+ELK RL++AP+L +PD + GF ++
Sbjct: 739 YRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVY 798
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
DAS G GC+L Q G+VVA AS+Q +PHE+NYPT
Sbjct: 799 CDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT 833
Score = 58.9 bits (141), Expect(2) = 8e-37
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSL 383
P HDLELAAV+ +LK+W HYL G R E++TDHKSL
Sbjct: 832 PTHDLELAAVVHALKIWHHYLFGTRTEVYTDHKSL 866
>emb|CAH66095.1| OSIGBa0114I04.2 [Oryza sativa]
Length = 1361
Score = 117 bits (293), Expect(2) = 1e-36
Identities = 50/95 (52%), Positives = 74/95 (77%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ +FSKIA+P+TRL +K ++ W+E C+++F+ELK RL++AP+L +PD + G ++
Sbjct: 726 YRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGSQVY 785
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
DAS G GC+L Q G+VVA AS+ +PHE+NYPT
Sbjct: 786 CDASKLGLGCVLMQDGKVVAYASRPLRPHEKNYPT 820
Score = 63.5 bits (153), Expect(2) = 1e-36
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+ +LK+W HYL G R E++TDHKSLKY
Sbjct: 819 PTHDLELAAVVHALKIWHHYLFGTRTEVYTDHKSLKY 855
>dbj|GAV79618.1| hypothetical protein CFOL_v3_23082, partial [Cephalotus
follicularis]
Length = 175
Score = 132 bits (331), Expect = 2e-36
Identities = 56/94 (59%), Positives = 77/94 (81%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+++FSK+A PLT+LT+K FVW ++CQ +F+ELK RL++APVL +P+ GF ++
Sbjct: 74 YRRFIKEFSKLATPLTQLTQKKSSFVWDDSCQASFQELKSRLISAPVLALPEGNEGFTVY 133
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYP 282
SDASGKG GC+L QHGRV+A AS++ KP+E NYP
Sbjct: 134 SDASGKGLGCVLMQHGRVIAYASRKLKPYEENYP 167
>gb|ABA98792.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1631
Score = 118 bits (295), Expect(2) = 2e-36
Identities = 51/95 (53%), Positives = 72/95 (75%)
Frame = +1
Query: 1 YRRFVRDFSKIAEPLTRLTRKSEQFVWTEACQRAFEELKRRLVTAPVLTIPDQQGGFAIH 180
YRRF+ +FSKIA+P+TRL +K ++ W+E C+ F+ELK RL++AP+L +PD + G ++
Sbjct: 1055 YRRFIENFSKIAKPMTRLLQKDVKYKWSEECEHCFQELKNRLLSAPILILPDPKKGLQVY 1114
Query: 181 SDASGKGQGCLLSQHGRVVACASKQFKPHERNYPT 285
DAS G GC+L Q G VVA AS+Q +PHE+NYPT
Sbjct: 1115 CDASKLGLGCVLMQDGNVVAYASRQLRPHEKNYPT 1149
Score = 62.4 bits (150), Expect(2) = 2e-36
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 279 PHHDLELAAVIFSLKLWRHYLLGERVEIFTDHKSLKY 389
P HDLELAAV+ +LK+W HYL G R E++TDHKSLKY
Sbjct: 1148 PTHDLELAAVVHALKIWCHYLFGTRTEVYTDHKSLKY 1184