BLASTX nr result

ID: Ophiopogon23_contig00034030 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00034030
         (462 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010907750.1| PREDICTED: WD repeat-containing protein 44-l...    82   3e-15
ref|XP_020266576.1| WD repeat-containing protein 44-like [Aspara...    80   2e-14
gb|OAY83629.1| WD repeat-containing protein 44 [Ananas comosus]        60   1e-07
ref|XP_020091419.1| LOW QUALITY PROTEIN: uncharacterized protein...    60   1e-07
gb|PKU76123.1| Protein Mut11 [Dendrobium catenatum]                    56   3e-06
ref|XP_020699371.1| WD repeat-containing protein 44-like isoform...    56   3e-06

>ref|XP_010907750.1| PREDICTED: WD repeat-containing protein 44-like [Elaeis guineensis]
          Length = 967

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 64/165 (38%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
 Frame = +3

Query: 3    KDVSVAIPWPNGGTNCEP-SPDLPSWSR---------ANHSLPTPSNLEDMFSNSRSHNC 152
            KDVSVAIPWP  G+N  P SP LP WSR         ++  + T S  ED F  SRSH  
Sbjct: 796  KDVSVAIPWPGSGSNLGPTSPSLPLWSRRYTHEQGESSDSQISTTS--EDNFPISRSH-Y 852

Query: 153  PSTPRKSFSENTPP--EDLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
            PS P+K+ SE T P  ++ H                                        
Sbjct: 853  PSLPKKNSSEQTLPCIDEFH-DISHLGSEIGTGSFVSSSSSMRSGAASSSVSDSGILSSS 911

Query: 327  XXXXXXXXXXXNRVSTNLEAANAWGLVVVTAETGGNIRVYQNFGL 461
                       NR S N+ AANAWGLVVVTA  GG+IR+YQNFGL
Sbjct: 912  LLSWGWSVGGSNRTS-NIGAANAWGLVVVTASLGGDIRIYQNFGL 955


>ref|XP_020266576.1| WD repeat-containing protein 44-like [Asparagus officinalis]
 gb|ONK79915.1| uncharacterized protein A4U43_C01F11770 [Asparagus officinalis]
          Length = 577

 Score = 80.1 bits (196), Expect = 2e-14
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = +3

Query: 3   KDVSVAIPWPNGGTNCEPSPDLPSWSRANHSLPTPSNLEDMFSNSRSHNCPS 158
           KDVSVA+PWPNGG +CEPSPDLPSWSR      + SNL+DMF +SRSHN P+
Sbjct: 430 KDVSVAVPWPNGGPHCEPSPDLPSWSRPTTD-RSASNLQDMFPSSRSHNSPA 480


>gb|OAY83629.1| WD repeat-containing protein 44 [Ananas comosus]
          Length = 972

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/64 (54%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   KDVSVAIPWPNGGTNCEPSPDLPSWSRANHSLPTPSNLEDMFSNSRSHNCPSTPRKSFSE 182
           KDVSVAIPWP  GTNC  SP L ++        + SNL D F +SRSH  P  P KSFSE
Sbjct: 811 KDVSVAIPWPGCGTNCAFSPSLSAFPER-----SISNLLDSFPSSRSH-LPPLPEKSFSE 864

Query: 183 NTPP 194
            T P
Sbjct: 865 RTLP 868


>ref|XP_020091419.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109712326 [Ananas
            comosus]
          Length = 997

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/64 (54%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    KDVSVAIPWPNGGTNCEPSPDLPSWSRANHSLPTPSNLEDMFSNSRSHNCPSTPRKSFSE 182
            KDVSVAIPWP  GTNC  SP L ++        + SNL D F +SRSH  P  P KSFSE
Sbjct: 836  KDVSVAIPWPGCGTNCAFSPSLSAFPER-----SISNLLDSFPSSRSH-LPPLPEKSFSE 889

Query: 183  NTPP 194
             T P
Sbjct: 890  RTLP 893


>gb|PKU76123.1| Protein Mut11 [Dendrobium catenatum]
          Length = 774

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = +3

Query: 366 VSTNLEAANAWGLVVVTAETGGNIRVYQNFGL 461
           V+ +LE++NAWGLVVVTA+ GGNIR+YQNFGL
Sbjct: 732 VTNSLESSNAWGLVVVTADLGGNIRIYQNFGL 763


>ref|XP_020699371.1| WD repeat-containing protein 44-like isoform X1 [Dendrobium
           catenatum]
          Length = 908

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = +3

Query: 366 VSTNLEAANAWGLVVVTAETGGNIRVYQNFGL 461
           V+ +LE++NAWGLVVVTA+ GGNIR+YQNFGL
Sbjct: 866 VTNSLESSNAWGLVVVTADLGGNIRIYQNFGL 897


Top