BLASTX nr result

ID: Ophiopogon23_contig00033033 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00033033
         (462 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255856.1| cyclin-D4-1-like [Asparagus officinalis] >gi...    42   3e-07
ref|XP_020254276.1| cyclin-D3-1-like [Asparagus officinalis]           44   7e-07
gb|ONK60880.1| uncharacterized protein A4U43_C08F23670 [Asparagu...    42   5e-06
ref|XP_020243910.1| cyclin-D4-1-like [Asparagus officinalis]           42   5e-06

>ref|XP_020255856.1| cyclin-D4-1-like [Asparagus officinalis]
 gb|ONK74174.1| uncharacterized protein A4U43_C03F3570 [Asparagus officinalis]
          Length = 345

 Score = 42.4 bits (98), Expect(2) = 3e-07
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -3

Query: 460 FLHKLNDSNSSTKQLVSRVPQLILSIAKGL 371
           FLHK ND NS +K L+SR  QLILS A+G+
Sbjct: 199 FLHKFNDGNSPSKPLISRAAQLILSTARGI 228



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = -2

Query: 377 RPSEIVAAVTMSVLDNAQVMEIDKITTCCNCVVKVQ 270
           RPSEI AAV MSVL   Q+++I+K  + CN V K +
Sbjct: 234 RPSEIAAAVAMSVLGETQMVDIEKFASFCNNVDKAK 269


>ref|XP_020254276.1| cyclin-D3-1-like [Asparagus officinalis]
          Length = 253

 Score = 43.9 bits (102), Expect(2) = 7e-07
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = -3

Query: 460 FLHKLNDSNSSTKQLVSRVPQLILSIAKGL 371
           FLHK ND NS TK L+SR  QLILS A+G+
Sbjct: 106 FLHKFNDDNSPTKPLISRAAQLILSTARGI 135



 Score = 37.0 bits (84), Expect(2) = 7e-07
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -2

Query: 377 RPSEIVAAVTMSVLDNAQVMEIDKITTCCNCV 282
           RPSEI AA  MSVL   Q+++I+K ++ CN V
Sbjct: 141 RPSEIAAAFAMSVLGETQMVDIEKFSSFCNNV 172


>gb|ONK60880.1| uncharacterized protein A4U43_C08F23670 [Asparagus officinalis]
          Length = 373

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -2

Query: 377 RPSEIVAAVTMSVLDNAQVMEIDKITTCCNCVVK 276
           +PSEI AAV MS L  AQV+EIDK    CN V K
Sbjct: 238 KPSEIAAAVAMSALGEAQVVEIDKAAASCNYVDK 271



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -3

Query: 460 FLHKLNDSNSSTKQLVSRVPQLILSIAKGL 371
           FLHKLN  +  TK L+S   QLILS A+G+
Sbjct: 203 FLHKLNGGDPPTKPLLSTAAQLILSTARGI 232


>ref|XP_020243910.1| cyclin-D4-1-like [Asparagus officinalis]
          Length = 348

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -2

Query: 377 RPSEIVAAVTMSVLDNAQVMEIDKITTCCNCVVK 276
           +PSEI AAV MS L  AQV+EIDK    CN V K
Sbjct: 238 KPSEIAAAVAMSALGEAQVVEIDKAAASCNYVDK 271



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -3

Query: 460 FLHKLNDSNSSTKQLVSRVPQLILSIAKGL 371
           FLHKLN  +  TK L+S   QLILS A+G+
Sbjct: 203 FLHKLNGGDPPTKPLLSTAAQLILSTARGI 232


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