BLASTX nr result
ID: Ophiopogon23_contig00032905
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00032905
(720 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015159974.1| PREDICTED: uncharacterized protein LOC102595... 68 6e-21
dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subt... 65 1e-20
ref|XP_023919559.1| uncharacterized protein LOC112031110 [Quercu... 71 7e-20
ref|XP_020266884.1| uncharacterized protein LOC109842415 [Aspara... 63 4e-19
ref|XP_018858162.1| PREDICTED: uncharacterized protein LOC109020... 65 4e-18
ref|XP_017621263.1| PREDICTED: uncharacterized protein LOC108465... 68 4e-18
gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 62 6e-18
dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subt... 60 7e-18
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera] 62 8e-18
ref|XP_017245360.1| PREDICTED: pleiotropic drug resistance prote... 63 1e-17
gb|OMO68489.1| reverse transcriptase [Corchorus capsularis] 57 1e-17
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 61 1e-17
ref|XP_008779305.1| PREDICTED: transposon Ty3-G Gag-Pol polyprot... 62 1e-17
ref|XP_010541181.1| PREDICTED: uncharacterized protein LOC104814... 59 2e-17
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera] 64 2e-17
gb|PNX93254.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 60 3e-17
dbj|GAU28992.1| hypothetical protein TSUD_391930 [Trifolium subt... 63 3e-17
gb|PNX94483.1| retrotransposon-related protein, partial [Trifoli... 60 3e-17
gb|OMO64097.1| reverse transcriptase [Corchorus capsularis] 60 3e-17
gb|OMO55704.1| reverse transcriptase [Corchorus capsularis] 59 3e-17
>ref|XP_015159974.1| PREDICTED: uncharacterized protein LOC102595311 [Solanum tuberosum]
Length = 1954
Score = 67.8 bits (164), Expect(2) = 6e-21
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = -3
Query: 517 IFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RLPKEQDIVDAS-SWVI 341
+ R+ + SP GHS + RT +RI +L D ++ + K+ S + ++
Sbjct: 1100 LLREFHSSPTGGHSGFFRTYKRISQVLYWNGIKRDVQNYVASCEVCKQNKYEALSLAGLL 1159
Query: 340 GTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISLLLCH---NEGCSSL 173
LP+PT++W DI+MDF+ GLP + G ILVVVD F K+ F LLLCH + + L
Sbjct: 1160 QPLPIPTQVWNDIAMDFISGLPKAMGHDTILVVVDHFTKYCHF--LLLCHPYTAKSVAEL 1217
Query: 172 LRRDILIIYAF*K 134
R+I+ ++ F K
Sbjct: 1218 FVREIVRLHGFPK 1230
Score = 61.6 bits (148), Expect(2) = 6e-21
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = -2
Query: 143 FLKTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
F KTI SDRD IF S F +LFKL GT L S YHPQTDGQTE VN
Sbjct: 1228 FPKTIVSDRDRIFVSQFWQELFKLSGTSLKLSSGYHPQTDGQTEVVN 1274
>dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subterraneum]
Length = 1326
Score = 64.7 bits (156), Expect(3) = 1e-20
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
TITSDRD IF S F T+ FKLQGT L+ S YHPQTDGQTE VN
Sbjct: 1070 TITSDRDPIFLSQFWTEFFKLQGTVLNRSTAYHPQTDGQTEIVN 1113
Score = 51.2 bits (121), Expect(3) = 1e-20
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 358 ASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
AS ++ LP+P+++W DISMDF++GLP S GK I VV+D K+ FI L
Sbjct: 993 ASPGLLQPLPIPSQIWEDISMDFIEGLPPSAGKQTIFVVIDRLGKYAHFIPL 1044
Score = 32.3 bits (72), Expect(3) = 1e-20
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 486 SATPVTTARCNGYDTFW*LGMRSMIQQAMRKYDACQRNKT*LMPPPGLLEP 334
S +TTAR FW GMR IQ +R CQ K+ PGLL+P
Sbjct: 952 SGRDITTARVQSL-FFW-KGMRKDIQTFIRNCSTCQTCKSDYAASPGLLQP 1000
>ref|XP_023919559.1| uncharacterized protein LOC112031110 [Quercus suber]
Length = 1414
Score = 71.2 bits (173), Expect(2) = 7e-20
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -3
Query: 481 HSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RLPKEQDIVDAS-SWVIGTLPLPTRMW-D 308
H +H+TL+RIR DD +H Q+ + ++Q + S + ++ LP+P ++W D
Sbjct: 1006 HEGFHKTLRRIRANFYWSKMRDDIKAHIQMCEVCQQQKVEQLSPAGLLQPLPIPNQVWED 1065
Query: 307 ISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
ISMDF+ GLP S GK ++VVVD F K+ FIS+
Sbjct: 1066 ISMDFIDGLPVSQGKSTVMVVVDRFSKYSHFISI 1099
Score = 54.7 bits (130), Expect(2) = 7e-20
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+TI DRD FTS F +LF+L GT + S YHPQTDGQ+E VN
Sbjct: 1124 RTIVCDRDPAFTSAFWKELFRLNGTSFNFSSAYHPQTDGQSEVVN 1168
>ref|XP_020266884.1| uncharacterized protein LOC109842415 [Asparagus officinalis]
Length = 1841
Score = 62.8 bits (151), Expect(2) = 4e-19
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Frame = -3
Query: 712 NGITIVEPSWLNSVKEIMATSEIFMKLQRRAGKRETP*SQLQGSQ*PMAL*R*GVVGPDS 533
+ I+ ++ WL ++ + +T F L + + + ++ + ++ P++
Sbjct: 1315 SAISTLKSDWLEEIRNMYSTDSYFTDLDAKLLQGQLEPNKYCKKEGLYYYKGKLLISPNA 1374
Query: 532 EI*RV-IFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQ---I*RLPKEQDI 365
+ R + ++ +DSP GHS RTL R+R + D ++ Q I + K ++I
Sbjct: 1375 QHIRTSLLKEYHDSPSAGHSGIIRTLHRLRRVFYWKGMKRDVQTYVQGCDICQRSKGENI 1434
Query: 364 VDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
AS ++ LP+P +W DISMDF+ LP S K AI VVVD K+ F L
Sbjct: 1435 --ASPGLLQPLPIPDSIWEDISMDFITHLPKSGNKSAIFVVVDRLSKYAHFFGL 1486
Score = 60.5 bits (145), Expect(2) = 4e-19
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
K+I SDRD +FTS F +LFKLQG+QL S YHPQTDGQTE N
Sbjct: 1511 KSIVSDRDPLFTSLFWKELFKLQGSQLKFSSAYHPQTDGQTEITN 1555
>ref|XP_018858162.1| PREDICTED: uncharacterized protein LOC109020199 [Juglans regia]
Length = 1720
Score = 64.7 bits (156), Expect(2) = 4e-18
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
TI +DRD +FTS+F +LFKLQGT+LH + YHPQ+DGQTE VN
Sbjct: 1139 TIVTDRDVVFTSNFWRELFKLQGTKLHFTSAYHPQSDGQTEVVN 1182
Score = 55.1 bits (131), Expect(2) = 4e-18
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = -3
Query: 484 GHSSYHRTLQRIRHILVTG---HEIDDPTSHAQI*RLPKEQDIVDASSWVIGTLPLPTRM 314
GH YH+ L R R + +I Q+ + K +++ A ++ LPLP+R
Sbjct: 1019 GHLGYHKALHRARADFIWSGMRRDIKQFIKECQVCQRCKTENLQPAG--LLQPLPLPSRS 1076
Query: 313 W-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
W DISMDF+ LP S G ILVVVD K+ F+ L
Sbjct: 1077 WSDISMDFIDSLPCSQGFSVILVVVDRLTKYAHFLPL 1113
>ref|XP_017621263.1| PREDICTED: uncharacterized protein LOC108465452 [Gossypium
arboreum]
Length = 734
Score = 68.2 bits (165), Expect(2) = 4e-18
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Frame = -3
Query: 517 IFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RLPKEQDIVDASSWV-- 344
+ ++ +DS GH HRTL ++ H +D ++ + L +QD V+ S V
Sbjct: 385 VMKECHDSRWAGHLGIHRTLALLKDRYYWPHMGEDVETYMKT-CLVCQQDEVELKSPVGL 443
Query: 343 IGTLPLPTRMWD-ISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISLLL-CHNEGCSSLL 170
+ LP+P R W+ +SMDF+ GLP S G +ILV+VD F K+ FIS CH EG + L
Sbjct: 444 LQPLPIPERPWESVSMDFIVGLPKSDGFASILVMVDRFSKYATFISATKECHIEGAARLF 503
Query: 169 RRDIL 155
R ++
Sbjct: 504 LRHVV 508
Score = 51.6 bits (122), Expect(2) = 4e-18
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = -2
Query: 140 LKTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
L +I SDR+ FT F TKLFK G+ L+ S + HPQ DGQTE+VN
Sbjct: 514 LLSIISDREGRFTGRFWTKLFKSMGSNLNFSTSMHPQIDGQTERVN 559
>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1476
Score = 62.0 bits (149), Expect(2) = 6e-18
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILV---TGHEIDDPTSHAQI*RLP 380
VVG D + R I + +DSP GHS T RI+ + +I + + +
Sbjct: 1048 VVGSDPTLHRFILKWFHDSPAGGHSGRDVTAARIKSLFFWKGMTKDIQQYIRNCDVCQRC 1107
Query: 379 KEQDIVDASSWVIGTLPLPTRMWD-ISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
K + I S ++ LP+P ++WD IS+DF++GLP S GK I VVVD K+ F++L
Sbjct: 1108 KPEQI--PSPGLLQPLPIPDKIWDAISLDFIEGLPSSMGKQVIFVVVDRLSKYAHFMAL 1164
Score = 57.4 bits (137), Expect(2) = 6e-18
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
TITSDRD IF S LF+LQG L+ S YHPQTDGQTE VN
Sbjct: 1190 TITSDRDPIFLSKLWNDLFQLQGVYLNKSTAYHPQTDGQTEIVN 1233
>dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subterraneum]
Length = 1417
Score = 59.7 bits (143), Expect(2) = 7e-18
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
++ITSDRD IF S F T+ FKLQG L+ S YHPQ+DGQTE VN
Sbjct: 1193 ESITSDRDPIFLSTFWTEFFKLQGVALNKSTAYHPQSDGQTEIVN 1237
Score = 59.3 bits (142), Expect(2) = 7e-18
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RL-PKE 374
V+GPDS + IF+ ++S GHS T RI+ + D + + + +
Sbjct: 1052 VIGPDSGVKNSIFKWLHNSSLGGHSGRDITASRIKSLFYWKGMAKDIIGYVKNCGVCQRS 1111
Query: 373 QDIVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
+ + AS ++ L +P+++W DISMDF++GLP S GK I VVVD K+ F++L
Sbjct: 1112 KPDLAASPGLLQPLSIPSQIWTDISMDFIEGLPPSFGKQVIFVVVDRLSKYAHFMAL 1168
>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
Length = 647
Score = 61.6 bits (148), Expect(2) = 8e-18
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILVTG---HEIDDPTSHAQI*RLP 380
VV P S I + R+ +DSP GHS RT +RI +++ S + +
Sbjct: 190 VVPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRA 249
Query: 379 KEQDIVDASSWVIGTLPLPTRMWD-ISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
K + A ++ LP+P ++WD I+MDF++GLP S GK ILVVVD K F++L
Sbjct: 250 KASTLSPAG--LLQPLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVDRLSKSAHFLAL 306
Score = 57.4 bits (137), Expect(2) = 8e-18
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+I SDRD IF S+F + FKL GTQL S YHPQTDGQTE +N
Sbjct: 332 SIISDRDPIFISNFWHEFFKLSGTQLKMSSAYHPQTDGQTEVIN 375
>ref|XP_017245360.1| PREDICTED: pleiotropic drug resistance protein 1-like [Daucus carota
subsp. sativus]
Length = 2712
Score = 62.8 bits (151), Expect(2) = 1e-17
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = -2
Query: 143 FLKTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
F TI SDRD +F S F +LFKLQGT LH S YHPQ+DGQTE VN
Sbjct: 977 FPTTIVSDRDQVFVSLFWAELFKLQGTLLHKSTAYHPQSDGQTEVVN 1023
Score = 55.8 bits (133), Expect(2) = 1e-17
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILV---TGHEIDDPTSHAQI*RLP 380
V+ P S + I D +DSP G+S +T +RI EI I +
Sbjct: 838 VLPPKSVLIATILHDYHDSPLGGYSGDFKTYKRIASDWFWPGMRKEIAQYVRQCSICQQA 897
Query: 379 KEQDIVDASSWVIGTLPLPTRMWD-ISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
K + + ++ L +PT +WD ISMDFV+GLP SHG +LVVVD K+ FI L
Sbjct: 898 KSSTL--SPGGLLQPLSIPTLVWDAISMDFVEGLPNSHGWNTVLVVVDRLTKYSHFIPL 954
>gb|OMO68489.1| reverse transcriptase [Corchorus capsularis]
Length = 795
Score = 57.0 bits (136), Expect(3) = 1e-17
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 358 ASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
AS ++ LP+PT++W DISMDF+ GLP SHGK I+VVVD K+ FI L
Sbjct: 433 ASPGLMQPLPIPTKVWIDISMDFISGLPKSHGKDVIMVVVDRLSKYAHFIPL 484
Score = 56.2 bits (134), Expect(3) = 1e-17
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+T+ SDRD +F S F +LF L G +LH S +YHPQTDGQTE N
Sbjct: 509 ETVVSDRDQVFLSSFWKELFILLGAKLHMSTSYHPQTDGQTEVTN 553
Score = 25.0 bits (53), Expect(3) = 1e-17
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = -1
Query: 543 DRTLRFEE*YSA--TITILLVSA--TPVTTARCNGY-DTFW*LGMRSMIQQA-MRKYDAC 382
D T R ++ ++ T+T L+ A P +TA+ + D +R M+ +R+ C
Sbjct: 365 DLTARIKQSWAQDPTVTKLMQKAKINPSSTAKYTWHQDQSIGNDLRGMLDSLYVRECTTC 424
Query: 381 QRNKT*LMPPPGLLEP 334
Q+NK+ + PGL++P
Sbjct: 425 QQNKSENVASPGLMQP 440
>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1478
Score = 60.8 bits (146), Expect(2) = 1e-17
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RL-PKE 374
V+G + +I I +DS GHS TL RIR + D ++ + + K
Sbjct: 1052 VIGANHDIKLSILSWLHDSAIGGHSGRDVTLSRIRSLFYWKGMAKDVLNYVRNCGICQKS 1111
Query: 373 QDIVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
+ + AS ++ LP+PT +W DISMDF++GLP S GK I VVVD K+ F++L
Sbjct: 1112 KPDLAASPGLLQPLPIPTLIWTDISMDFIEGLPKSGGKQVIFVVVDRLSKYAHFMAL 1168
Score = 57.4 bits (137), Expect(2) = 1e-17
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
++ITSDRD IF S F + FKLQG L+ S YHPQ+DGQTE VN
Sbjct: 1193 ESITSDRDPIFISTFWNEFFKLQGVALNKSSAYHPQSDGQTEIVN 1237
>ref|XP_008779305.1| PREDICTED: transposon Ty3-G Gag-Pol polyprotein [Phoenix dactylifera]
Length = 1179
Score = 61.6 bits (148), Expect(2) = 1e-17
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Frame = -3
Query: 547 VGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RLPKEQD 368
+ P S + +I D++ SP GH H+TL RIR + P + + + +
Sbjct: 751 LSPTSTLIPLILADSHSSPIGGHFGTHKTLYRIRQSFIW------PKMRQTVKKFLRTCE 804
Query: 367 IVDAS-------SWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFI 212
+ + ++ LP+PTR+W D+SMDF++GLP ++G I+VVVD K+ F+
Sbjct: 805 VCQQCKSDCMQPAGLLQPLPIPTRIWTDVSMDFIEGLPTANGHSVIMVVVDRLSKYAHFV 864
Query: 211 SL 206
L
Sbjct: 865 PL 866
Score = 56.6 bits (135), Expect(2) = 1e-17
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+I SDRD +FTS F LF+LQ T L S +YHPQTDGQTE VN
Sbjct: 892 SIVSDRDKVFTSSFWQNLFRLQETNLCMSSSYHPQTDGQTEVVN 935
>ref|XP_010541181.1| PREDICTED: uncharacterized protein LOC104814705 [Tarenaya
hassleriana]
Length = 1805
Score = 59.3 bits (142), Expect(2) = 2e-17
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = -2
Query: 143 FLKTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
F K+I SDRD +F S+F ++LF++ GT+L S YHPQTDGQTE +N
Sbjct: 1466 FPKSIVSDRDKVFLSNFWSELFRIAGTKLKFSTAYHPQTDGQTEVLN 1512
Score = 58.5 bits (140), Expect(2) = 2e-17
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILV-TGHEIDDPTSHAQI*RLPKE 374
VV S I + +DS GHS RTL+RI+ + G + D A+ +
Sbjct: 1327 VVSKHSSFIPTILAEFHDSKMGGHSGVLRTLKRIQELFHWVGMKADIKKYVAECAVCQSQ 1386
Query: 373 QDIVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
+ A + ++ LP+P +W DISMDF++GLP S G +LVVVD K+ FI+L
Sbjct: 1387 KYSTLAPAGLLQPLPIPEHIWEDISMDFIEGLPRSAGYNVVLVVVDRLSKYAHFIAL 1443
>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
Length = 790
Score = 63.9 bits (154), Expect(2) = 2e-17
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = -3
Query: 547 VGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RLPKEQD 368
+ P+S + I D + SP GH +H+TL RI+ + + R+ + D
Sbjct: 390 LSPNSSLISKIMADYHSSPIGGHFGFHKTLSRIKQSFFWSN----------MRRMRFKID 439
Query: 367 IVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
+ + ++ LP+PT+MW D+SMDF++GLP S+G +I+VVVD K+ F++L
Sbjct: 440 CMKLAG-LLQPLPVPTQMWIDVSMDFIEGLPSSNGYTSIMVVVDRLTKYAHFVAL 493
Score = 53.5 bits (127), Expect(2) = 2e-17
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+I SDRD +F S F LF+LQGT+L S +YHPQ++GQTE VN
Sbjct: 519 SIVSDRDKVFISSFWLALFQLQGTKLCMSSSYHPQSNGQTEVVN 562
>gb|PNX93254.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 1534
Score = 59.7 bits (143), Expect(2) = 3e-17
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+I SDRD IF S+F +LFKLQGT+L S YHP+TDGQTE VN
Sbjct: 1217 SIVSDRDPIFMSNFWRELFKLQGTKLKMSTAYHPETDGQTEVVN 1260
Score = 57.4 bits (137), Expect(2) = 3e-17
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIR---HILVTGHEIDDPTSHAQI*RLP 380
V+ +S + ++ + + +P GHS +++T +RI + + + + D I
Sbjct: 1075 VIPANSSMIPMLLTEFHTTPQGGHSGFYKTYRRIAANVYWIGMKNTVQDFVKACDI--CQ 1132
Query: 379 KEQDIVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
+++ + + ++ LP+P R+W D+SMDF+ GLP S G AILVVVD K+ FI L
Sbjct: 1133 RQKYLTTSPGGLLQPLPIPNRIWEDLSMDFITGLPKSKGYEAILVVVDRLSKYVHFIPL 1191
>dbj|GAU28992.1| hypothetical protein TSUD_391930 [Trifolium subterraneum]
Length = 1407
Score = 62.8 bits (151), Expect(2) = 3e-17
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -2
Query: 134 TITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
+I SDRD IF S+F +LFKLQGTQL S +YHPQTDGQTE VN
Sbjct: 1189 SIVSDRDPIFISNFWQELFKLQGTQLKMSTSYHPQTDGQTEVVN 1232
Score = 54.3 bits (129), Expect(2) = 3e-17
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = -3
Query: 517 IFRDNNDSPGVGHSSYHRTLQRIRHILVTGHEIDDPTSHAQI*RLPKEQDIVDAS-SWVI 341
+ ++ + +P GHS ++RT +R+ L + Q + + V A+ ++
Sbjct: 1058 LLKEFHSTPQGGHSGFYRTYRRLAANLYWVSMKKSIQQYVQECEICQRNKYVTATPGGLL 1117
Query: 340 GTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
LP+PT +W D+SMDF+ GLP + G AI VVVD K+ FI L
Sbjct: 1118 QPLPIPTHIWEDLSMDFITGLPRAKGFDAIFVVVDRLSKYSHFIPL 1163
>gb|PNX94483.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 1287
Score = 59.7 bits (143), Expect(2) = 3e-17
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
K+I SDRD +FTS F LFKLQGT L S YHPQ+DGQTE +N
Sbjct: 1183 KSIVSDRDKVFTSSFWQHLFKLQGTSLAMSSAYHPQSDGQTEVLN 1227
Score = 57.4 bits (137), Expect(2) = 3e-17
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIR---HILVTGHEIDDPTSHAQI*RLP 380
V+ S + + + + + SP GH+ + RTL RI+ + + ++ + + I +
Sbjct: 1042 VIPQKSALIQQVLHEFHSSPIGGHAGFTRTLARIKSQFYWVAMKKDVLEYIQNCVICQQA 1101
Query: 379 KEQDIVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
K + + A ++ LP+PT++W DI+MDF+ GLP S+G ILVVVD K+ F+ +
Sbjct: 1102 KTTNTLPAG--LLQPLPIPTQVWEDIAMDFITGLPLSYGYTTILVVVDRLTKYAHFLPM 1158
>gb|OMO64097.1| reverse transcriptase [Corchorus capsularis]
Length = 780
Score = 59.7 bits (143), Expect(2) = 3e-17
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = -3
Query: 550 VVGPDSEI*RVIFRDNNDSPGVGHSSYHRTLQRIRHILV---TGHEIDDPTSHAQI*RLP 380
VVG D+++ R + + S G GHS T +RI +L + + +
Sbjct: 403 VVGADTKLRRELLELFHSSSGGGHSGMDATTKRIAAVLYWKGMKKAVRQFVRECSVCQQY 462
Query: 379 KEQDIVDASSWVIGTLPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
K + A ++ LPLP R+W DISMDF++GLP S GK ILVVVD K+ FI+L
Sbjct: 463 KYDN--SAYPGLLQPLPLPKRIWTDISMDFIEGLPKSGGKDVILVVVDRLSKYNHFIAL 519
Score = 57.4 bits (137), Expect(2) = 3e-17
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
++I SDRD +F S F T+L KL GT+L S YHPQTDGQTE VN
Sbjct: 544 ESIVSDRDKVFISKFWTELLKLMGTKLKLSTAYHPQTDGQTEIVN 588
>gb|OMO55704.1| reverse transcriptase [Corchorus capsularis]
Length = 2083
Score = 58.9 bits (141), Expect(3) = 3e-17
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = -2
Query: 137 KTITSDRDCIFTSDF*TKLFKLQGTQLHHSLTYHPQTDGQTEQVN 3
++I SDRD +F S F +LFKLQGTQL S YHPQTDGQ+E +N
Sbjct: 1189 RSIVSDRDPLFVSKFWNELFKLQGTQLPMSSAYHPQTDGQSEVLN 1233
Score = 50.4 bits (119), Expect(3) = 3e-17
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = -3
Query: 334 LPLPTRMW-DISMDFVKGLPYSHGKMAILVVVDWFFKFPCFISL 206
LP+P++ W DI+MDF+ LP SHGK+ I V+VD F K+ F++L
Sbjct: 1121 LPIPSQAWQDIAMDFITHLPISHGKVTIWVIVDRFSKYAHFLAL 1164
Score = 27.3 bits (59), Expect(3) = 3e-17
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 444 TFW*LGMRSMIQQAMRKYDACQRNKT*LMPPPGLLEP 334
+FW MR +++ + CQ K P GLLEP
Sbjct: 1084 SFWWNNMRKSVKEFVSTCKVCQEVKYLTSKPQGLLEP 1120