BLASTX nr result

ID: Ophiopogon23_contig00032842 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00032842
         (611 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244181.1| uncharacterized protein LOC109822395 [Aspara...    73   1e-11
gb|ONK60890.1| uncharacterized protein A4U43_C08F23770 [Asparagu...    73   1e-11
ref|XP_020255617.1| transcription termination factor MTERF8, chl...    61   2e-07
ref|XP_020255620.1| uncharacterized protein LOC109832644 [Aspara...    58   1e-06

>ref|XP_020244181.1| uncharacterized protein LOC109822395 [Asparagus officinalis]
          Length = 381

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +3

Query: 378 AETLDPCRK-SNPVAEYLINSCGLXXXXXXXXXXXXXXWTSIDQARRVRHFFKHHG-FTD 551
           ++ LDP    SN +A+ LINSCG                T +  AR V HFFKHHG  T+
Sbjct: 31  SKALDPSSPTSNLIAQCLINSCGFSSQKASAVVKHIPRSTLVGNARSVMHFFKHHGGLTE 90

Query: 552 THVRKLISNYPRILSADIEK 611
           TH+RKLISNYP IL+AD++K
Sbjct: 91  THIRKLISNYPSILNADVDK 110


>gb|ONK60890.1| uncharacterized protein A4U43_C08F23770 [Asparagus officinalis]
          Length = 432

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +3

Query: 378 AETLDPCRK-SNPVAEYLINSCGLXXXXXXXXXXXXXXWTSIDQARRVRHFFKHHG-FTD 551
           ++ LDP    SN +A+ LINSCG                T +  AR V HFFKHHG  T+
Sbjct: 31  SKALDPSSPTSNLIAQCLINSCGFSSQKASAVVKHIPRSTLVGNARSVMHFFKHHGGLTE 90

Query: 552 THVRKLISNYPRILSADIEK 611
           TH+RKLISNYP IL+AD++K
Sbjct: 91  THIRKLISNYPSILNADVDK 110


>ref|XP_020255617.1| transcription termination factor MTERF8, chloroplastic-like isoform
           X1 [Asparagus officinalis]
 ref|XP_020255618.1| transcription termination factor MTERF8, chloroplastic-like isoform
           X2 [Asparagus officinalis]
          Length = 382

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/74 (41%), Positives = 41/74 (55%)
 Frame = +3

Query: 390 DPCRKSNPVAEYLINSCGLXXXXXXXXXXXXXXWTSIDQARRVRHFFKHHGFTDTHVRKL 569
           +P  KSNP+A+YL+ SCG                        VRHFFKH+GFT+ +++ L
Sbjct: 37  NPEPKSNPIADYLMTSCGFSSQKAANTSKHLTHRRFPANPDSVRHFFKHNGFTEANIKSL 96

Query: 570 ISNYPRILSADIEK 611
           ISN P IL AD+ K
Sbjct: 97  ISNNPAILWADVGK 110


>ref|XP_020255620.1| uncharacterized protein LOC109832644 [Asparagus officinalis]
          Length = 235

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +3

Query: 390 DPCRKSNPVAEYLINSCGLXXXXXXXXXXXXXXWTSIDQARRVRHFFKHHGFTDTHVRKL 569
           +P  KSNP++ YL+++ GL                       VRHFFKH+GFTDT+++ L
Sbjct: 34  NPEPKSNPISVYLMSTFGLSSQKAASSSKLLPNRRFPSNPDSVRHFFKHNGFTDTNIKSL 93

Query: 570 ISNYPRILSADIEK 611
           ISN P IL AD+++
Sbjct: 94  ISNDPVILWADLDR 107


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