BLASTX nr result

ID: Ophiopogon23_contig00032502 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00032502
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252754.1| pentatricopeptide repeat-containing protein ...    73   7e-12

>ref|XP_020252754.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 ref|XP_020252755.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 ref|XP_020252756.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 gb|ONK77107.1| uncharacterized protein A4U43_C02F3170 [Asparagus officinalis]
          Length = 824

 Score = 72.8 bits (177), Expect(2) = 7e-12
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +2

Query: 284 PPIEEAHAIKFLLNNRRNPRTALQYYKSVAMDGFFTLDSFCLLLRILVKGGR 439
           PPI E    +FLL+N+RNP+TAL+Y+KS   DGFF LD FC+LL IL++ GR
Sbjct: 50  PPIREHQVTQFLLSNQRNPKTALRYFKSAVKDGFFALDPFCILLHILIRSGR 101



 Score = 25.0 bits (53), Expect(2) = 7e-12
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 459 ELIMNTVLGISSLKGPGIFDRLVETSK 539
           EL+ +++L  SS +   + D+LVETSK
Sbjct: 107 ELLKDSLLSDSSPEPSDVVDKLVETSK 133


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