BLASTX nr result

ID: Ophiopogon23_contig00032429 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00032429
         (469 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009412762.1| PREDICTED: uncharacterized protein LOC103994...    68   1e-10
ref|XP_008799616.1| PREDICTED: neurofilament medium polypeptide ...    55   7e-06

>ref|XP_009412762.1| PREDICTED: uncharacterized protein LOC103994162 [Musa acuminata
           subsp. malaccensis]
          Length = 312

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
 Frame = +3

Query: 6   LLTIGTFGHSN-LAAEPTPPQPERRPSADDQEYEPKQEEEVLNSAVAKPTAAMLPSPTLP 182
           +LTIGT GH +   ++P P + +     +++  E +++EEV  +A A   AA  P P + 
Sbjct: 104 ILTIGTLGHQDSFVSQPYPAREDELLQEEEENVEDEEKEEVKEAAPAV-AAAREPLPAIV 162

Query: 183 -ESAVIKLEPD-QIKQLXXXXXXXXXXXXISREPLLKEDNEKMEIKRTTLADLFAADQEM 356
            ES   KL  + ++ ++            I   PLLKED EK E  RTTLADLFAAD  +
Sbjct: 163 IESFKFKLPVEAEVNRMEMAVQDVEEAEKIQELPLLKEDKEKRERGRTTLADLFAADAFV 222

Query: 357 ARITADDG---PAPVDKKHATRPTKSVLKKIKNDKESPT 464
               A++       + K+ A    K   +  K +K +PT
Sbjct: 223 VNDPAENDIKRANDIVKQQANPERKKAQRDKKEEKRTPT 261


>ref|XP_008799616.1| PREDICTED: neurofilament medium polypeptide [Phoenix dactylifera]
          Length = 257

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
 Frame = +3

Query: 6   LLTIGTFGHSN----LAAEPTPPQPE----RRPSADDQEYEPKQEEEVLNSAVAKPTAAM 161
           +LTIGT GH +    L ++   PQ E     +   +++E E ++E+EVL  A        
Sbjct: 58  ILTIGTLGHGHPCHVLFSQSNSPQEESLQKEQEKEEEEEEEDEEEQEVLVVAAFVVEERR 117

Query: 162 LPSPTLPESAVIKLEPDQIKQLXXXXXXXXXXXXISREPLLKEDNEKMEIKRTTLADLFA 341
            P      S V     ++ K++            +  EPLLK + EK E  RTTLA+LFA
Sbjct: 118 KPVAVFEPSIVKSPFDEEDKKMVQTVVNEEEAEKVLEEPLLKNE-EKKERGRTTLAELFA 176

Query: 342 ADQEMAR 362
           AD  M R
Sbjct: 177 ADASMER 183


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