BLASTX nr result

ID: Ophiopogon23_contig00032163 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00032163
         (780 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519116.1| PREDICTED: uncharacterized protein LOC827552...    42   1e-05

>ref|XP_002519116.1| PREDICTED: uncharacterized protein LOC8275526 [Ricinus communis]
 gb|EEF43327.1| conserved hypothetical protein [Ricinus communis]
          Length = 513

 Score = 42.0 bits (97), Expect(2) = 1e-05
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
 Frame = +2

Query: 248 EALKKIMRNPTNFLVAL------LSPKFRFICKFFHFNIQPQCGNLNTIRLASIITICAY 409
           EA K ++ NP + +V+       L  + R +       I P+  +LN +    ++ +   
Sbjct: 162 EAFKMLLENPDSSVVSSKVDACHLKLEMRLLHLMVVHIILPRKRSLNCVSDMDLLVMWHI 221

Query: 410 LNGVEINIPDLILKNFG--EPRKQMAMP--CFLTLVFRHFGISIEGVESSPSKGD--FTI 571
           LNG++ N+P ++L +      +K   +P    LTL+F+HF +S+E  E    K    ++ 
Sbjct: 222 LNGMDFNLPFVLLSHMVACSEKKNAYLPYGMMLTLIFKHFKVSLEEEECKELKSSDIYSE 281

Query: 572 TTWNKM 589
            T  KM
Sbjct: 282 VTLRKM 287



 Score = 36.2 bits (82), Expect(2) = 1e-05
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 16  FYPSLVAQFYANLSWNGRCLILNFQVNGKNILIDGRVISLILSI 147
           FYP LV  FYANLS++     +N  V GK I ++ + +  I+ I
Sbjct: 94  FYPELVRHFYANLSFDADKAQINSFVKGKEIRLNQKSLKKIIGI 137


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