BLASTX nr result
ID: Ophiopogon23_contig00032108
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00032108
(612 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010653445.1| PREDICTED: glycine-rich RNA-binding protein ... 52 2e-07
ref|XP_010653444.1| PREDICTED: glycine-rich RNA-binding protein ... 52 2e-07
ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ... 52 2e-07
ref|XP_023517167.1| organelle RRM domain-containing protein 2, m... 53 2e-07
ref|XP_022972736.1| organelle RRM domain-containing protein 2, m... 53 2e-07
ref|XP_022962832.1| organelle RRM domain-containing protein 2, m... 53 2e-07
ref|XP_010260092.1| PREDICTED: glycine-rich RNA-binding protein ... 53 3e-07
ref|XP_010088058.2| organelle RRM domain-containing protein 2, m... 52 3e-07
gb|EXB31277.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 52 3e-07
gb|OIV92119.1| hypothetical protein TanjilG_26977 [Lupinus angus... 52 4e-07
ref|XP_010047468.1| PREDICTED: glycine-rich RNA-binding protein ... 52 5e-07
ref|XP_019425528.1| PREDICTED: glycine-rich RNA-binding protein ... 52 5e-07
ref|XP_007162665.1| hypothetical protein PHAVU_001G170000g [Phas... 50 5e-07
ref|XP_022143719.1| organelle RRM domain-containing protein 2, m... 53 6e-07
ref|XP_015899490.1| PREDICTED: glycine-rich RNA-binding protein ... 53 6e-07
ref|XP_020273175.1| glycine-rich RNA-binding protein 2, mitochon... 57 7e-07
gb|OVA03527.1| RNA recognition motif domain [Macleaya cordata] 50 1e-06
ref|XP_022145577.1| organelle RRM domain-containing protein 2, m... 51 1e-06
ref|XP_019161793.1| PREDICTED: glycine-rich RNA-binding protein ... 51 1e-06
dbj|BAT93443.1| hypothetical protein VIGAN_07240500 [Vigna angul... 50 2e-06
>ref|XP_010653445.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
isoform X3 [Vitis vinifera]
Length = 137
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY +EEAEKAREGMNAKFLD
Sbjct: 73 GFGFVTYTTLEEAEKAREGMNAKFLD 98
Score = 32.0 bits (71), Expect(2) = 2e-07
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
L+AKVITDR+SGRSKG
Sbjct: 58 LEAKVITDRVSGRSKG 73
>ref|XP_010653444.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
isoform X2 [Vitis vinifera]
Length = 139
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY +EEAEKAREGMNAKFLD
Sbjct: 75 GFGFVTYTTLEEAEKAREGMNAKFLD 100
Score = 32.0 bits (71), Expect(2) = 2e-07
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
L+AKVITDR+SGRSKG
Sbjct: 60 LEAKVITDRVSGRSKG 75
>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
isoform X1 [Vitis vinifera]
emb|CBI32608.3| unnamed protein product, partial [Vitis vinifera]
Length = 140
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY +EEAEKAREGMNAKFLD
Sbjct: 76 GFGFVTYTTLEEAEKAREGMNAKFLD 101
Score = 32.0 bits (71), Expect(2) = 2e-07
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
L+AKVITDR+SGRSKG
Sbjct: 61 LEAKVITDRVSGRSKG 76
>ref|XP_023517167.1| organelle RRM domain-containing protein 2, mitochondrial [Cucurbita
pepo subsp. pepo]
Length = 145
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY+ IEEAEKAREGMNAKFLD
Sbjct: 79 GFGFVTYSTIEEAEKAREGMNAKFLD 104
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
T+F + ++AKVITDR +GRSKG
Sbjct: 58 TSFGQLVEAKVITDRATGRSKG 79
>ref|XP_022972736.1| organelle RRM domain-containing protein 2, mitochondrial [Cucurbita
maxima]
Length = 146
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY+ IEEAEKAREGMNAKFLD
Sbjct: 79 GFGFVTYSTIEEAEKAREGMNAKFLD 104
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
T+F + ++AKVITDR +GRSKG
Sbjct: 58 TSFGQLVEAKVITDRATGRSKG 79
>ref|XP_022962832.1| organelle RRM domain-containing protein 2, mitochondrial [Cucurbita
moschata]
Length = 145
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY+ IEEAEKAREGMNAKFLD
Sbjct: 79 GFGFVTYSTIEEAEKAREGMNAKFLD 104
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
T+F + ++AKVITDR +GRSKG
Sbjct: 58 TSFGQLVEAKVITDRATGRSKG 79
>ref|XP_010260092.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Nelumbo nucifera]
Length = 143
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTYA IE+AEKAREGMNAKFLD
Sbjct: 79 GFGFVTYATIEDAEKAREGMNAKFLD 104
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
L+AKVI DR+SGRSKG
Sbjct: 64 LEAKVIADRVSGRSKG 79
>ref|XP_010088058.2| organelle RRM domain-containing protein 2, mitochondrial [Morus
notabilis]
Length = 140
Score = 52.0 bits (123), Expect(2) = 3e-07
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGF+TY +IEEAEKAREGMNAKFLD
Sbjct: 77 GFGFITYRSIEEAEKAREGMNAKFLD 102
Score = 30.4 bits (67), Expect(2) = 3e-07
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + + AKV+TDR+SGRSKG
Sbjct: 56 SSFGQIVDAKVVTDRVSGRSKG 77
>gb|EXB31277.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 111
Score = 52.0 bits (123), Expect(2) = 3e-07
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGF+TY +IEEAEKAREGMNAKFLD
Sbjct: 48 GFGFITYRSIEEAEKAREGMNAKFLD 73
Score = 30.4 bits (67), Expect(2) = 3e-07
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + + AKV+TDR+SGRSKG
Sbjct: 27 SSFGQIVDAKVVTDRVSGRSKG 48
>gb|OIV92119.1| hypothetical protein TanjilG_26977 [Lupinus angustifolius]
Length = 165
Score = 51.6 bits (122), Expect(2) = 4e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GF FVTYA IEEAEKAREGMNAKFLD
Sbjct: 100 GFAFVTYATIEEAEKAREGMNAKFLD 125
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + ++AKVITDR SGRSKG
Sbjct: 79 SSFGQLIEAKVITDRASGRSKG 100
>ref|XP_010047468.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Eucalyptus grandis]
gb|KCW88912.1| hypothetical protein EUGRSUZ_A01243 [Eucalyptus grandis]
Length = 143
Score = 52.0 bits (123), Expect(2) = 5e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY IEEAEKAREGMNAKFLD
Sbjct: 79 GFGFVTYETIEEAEKAREGMNAKFLD 104
Score = 30.0 bits (66), Expect(2) = 5e-07
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
++AKVITDR+SGRSKG
Sbjct: 64 VEAKVITDRMSGRSKG 79
>ref|XP_019425528.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Lupinus angustifolius]
Length = 142
Score = 51.6 bits (122), Expect(2) = 5e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GF FVTYA IEEAEKAREGMNAKFLD
Sbjct: 77 GFAFVTYATIEEAEKAREGMNAKFLD 102
Score = 30.4 bits (67), Expect(2) = 5e-07
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + ++AKVITDR SGRSKG
Sbjct: 56 SSFGQLIEAKVITDRASGRSKG 77
>ref|XP_007162665.1| hypothetical protein PHAVU_001G170000g [Phaseolus vulgaris]
gb|ESW34659.1| hypothetical protein PHAVU_001G170000g [Phaseolus vulgaris]
Length = 139
Score = 50.4 bits (119), Expect(2) = 5e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GF FVTY +IEEAEKAREGMNAKFLD
Sbjct: 75 GFAFVTYTSIEEAEKAREGMNAKFLD 100
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
T+F + ++AKVITDR SGRSKG
Sbjct: 54 TSFGQLVEAKVITDRASGRSKG 75
>ref|XP_022143719.1| organelle RRM domain-containing protein 2, mitochondrial [Momordica
charantia]
Length = 145
Score = 52.8 bits (125), Expect(2) = 6e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTYA IE+AEKAREGMNAKFLD
Sbjct: 81 GFGFVTYATIEDAEKAREGMNAKFLD 106
Score = 28.9 bits (63), Expect(2) = 6e-07
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + ++AKVITDR +GRSKG
Sbjct: 60 SSFGQLVEAKVITDRATGRSKG 81
>ref|XP_015899490.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Ziziphus jujuba]
Length = 143
Score = 52.8 bits (125), Expect(2) = 6e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY +IEEAEKAREGMNAKFLD
Sbjct: 79 GFGFVTYTSIEEAEKAREGMNAKFLD 104
Score = 28.9 bits (63), Expect(2) = 6e-07
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + + AKVI DR+SGRSKG
Sbjct: 58 SSFGQIVDAKVIADRVSGRSKG 79
>ref|XP_020273175.1| glycine-rich RNA-binding protein 2, mitochondrial [Asparagus
officinalis]
gb|ONK62313.1| uncharacterized protein A4U43_C07F2610 [Asparagus officinalis]
Length = 163
Score = 48.9 bits (115), Expect(2) = 7e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFV+YA IE+AEKAR GMNAKFLD
Sbjct: 99 GFGFVSYATIEDAEKARAGMNAKFLD 124
Score = 32.3 bits (72), Expect(2) = 7e-07
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
L+AKVITDRISGRSKG
Sbjct: 84 LEAKVITDRISGRSKG 99
Score = 57.0 bits (136), Expect = 1e-06
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +2
Query: 161 AVLKWNTPFSQNRRTSSFLDD-KSAETNLPPLITPKLFV 274
++LKWN PFSQNRR+SSFLDD +++ N PPL TPKLF+
Sbjct: 23 SLLKWNIPFSQNRRSSSFLDDMDTSDKNPPPLTTPKLFI 61
>gb|OVA03527.1| RNA recognition motif domain [Macleaya cordata]
Length = 144
Score = 50.4 bits (119), Expect(2) = 1e-06
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFV YA IEEAEKA+EGMNAKFLD
Sbjct: 80 GFGFVRYATIEEAEKAKEGMNAKFLD 105
Score = 30.4 bits (67), Expect(2) = 1e-06
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
L+AKVITDR SGRSKG
Sbjct: 65 LEAKVITDRASGRSKG 80
>ref|XP_022145577.1| organelle RRM domain-containing protein 2, mitochondrial-like
[Momordica charantia]
Length = 145
Score = 51.2 bits (121), Expect(2) = 1e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTYA+IEEAEKARE MNAKFLD
Sbjct: 82 GFGFVTYASIEEAEKAREEMNAKFLD 107
Score = 29.3 bits (64), Expect(2) = 1e-06
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 481 LKAKVITDRISGRSKG 528
++AKVITDR SGRSKG
Sbjct: 67 VEAKVITDRASGRSKG 82
>ref|XP_019161793.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Ipomoea nil]
ref|XP_019161794.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Ipomoea nil]
ref|XP_019161795.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Ipomoea nil]
ref|XP_019161796.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial
[Ipomoea nil]
Length = 143
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GFGFVTY IEEA+KAREGMNAKFLD
Sbjct: 79 GFGFVTYETIEEAQKAREGMNAKFLD 104
Score = 29.6 bits (65), Expect(2) = 1e-06
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 469 FLKELKAKVITDRISGRSKG 528
F K ++AKVITDR +GRSKG
Sbjct: 60 FGKLVEAKVITDRATGRSKG 79
>dbj|BAT93443.1| hypothetical protein VIGAN_07240500 [Vigna angularis var.
angularis]
Length = 179
Score = 50.1 bits (118), Expect(2) = 2e-06
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +3
Query: 528 GFGFVTYAAIEEAEKAREGMNAKFLD 605
GF FVTY IEEAEKAREGMNAKFLD
Sbjct: 75 GFAFVTYTTIEEAEKAREGMNAKFLD 100
Score = 30.0 bits (66), Expect(2) = 2e-06
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 463 TTFLKELKAKVITDRISGRSKG 528
++F + ++AKVITDR SGRSKG
Sbjct: 54 SSFGQLVEAKVITDRASGRSKG 75