BLASTX nr result

ID: Ophiopogon23_contig00032001 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00032001
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019701352.1| PREDICTED: cellulose synthase-like protein E...    40   3e-06
gb|ABA94477.1| retrotransposon protein, putative, unclassified [...    42   5e-06

>ref|XP_019701352.1| PREDICTED: cellulose synthase-like protein E6 [Elaeis guineensis]
          Length = 553

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +1

Query: 319 TIPELFKFDLLWVFNDFHWGRTDIRRLNYVHIVLVSKME 435
           T  +L K D+   FN FH G TDI RLNY  I L+ K +
Sbjct: 38  TFWDLIKSDICKFFNQFHAGNTDISRLNYTFISLIPKKQ 76



 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 209 LSRLAEEFTLEQIRNIVFSLALDKSRGPDGFITEFFQQF 325
           +  L   FT ++I N VFSL   K+ GPDG+ +EF+Q F
Sbjct: 1   MESLDRPFTEKEISNAVFSLPKGKALGPDGYPSEFYQTF 39


>gb|ABA94477.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1015

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 197 EEVDLSRLAEEFTLEQIRNIVFSLALDKSRGPDGFITEFFQQF 325
           +E D   L + F+LE+++ +VF L  +++ GPDGF  EF+ +F
Sbjct: 656 KEEDKVELTKPFSLEEVKKVVFELRKNRALGPDGFPGEFYMRF 698



 Score = 36.2 bits (82), Expect(2) = 5e-06
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 328 ELFKFDLLWVFNDFHWGRTDIRRLNYVHIVLVSKMEGA 441
           ++ K DLL + NDFH G  ++ RLNY  + LV K + A
Sbjct: 700 DIIKNDLLELINDFHKGLLNVERLNYGIVTLVPKTKDA 737


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