BLASTX nr result

ID: Ophiopogon23_contig00031960 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00031960
         (612 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273860.1| BRCT domain-containing protein At4g02110 [As...   155   6e-40
ref|XP_017696805.1| PREDICTED: BRCT domain-containing protein At...    68   1e-09
ref|XP_010921524.1| PREDICTED: BRCT domain-containing protein At...    65   1e-08

>ref|XP_020273860.1| BRCT domain-containing protein At4g02110 [Asparagus officinalis]
 gb|ONK63267.1| uncharacterized protein A4U43_C07F13190 [Asparagus officinalis]
          Length = 1244

 Score =  155 bits (391), Expect = 6e-40
 Identities = 100/206 (48%), Positives = 128/206 (62%), Gaps = 3/206 (1%)
 Frame = -3

Query: 610 IGRQEARSITQTSGYRNQHVVKDGELSVPSDINLQKRSNALPSDVAATKIHSTSSRLDER 431
           I  QEA  + + S   + + +KDGEL+VP D++LQKR N   SDV  TKI S SSR  ER
Sbjct: 331 IDHQEAGGVARKS---DNNAMKDGELTVPVDVSLQKRDNITLSDVLTTKIGSVSSR-QER 386

Query: 430 CS---FSKKTPTMEVVREEPSTSWRGDLNENNSKGDLDIELLETRRNYKPDLFQSSTTSS 260
            S   +SK+TP  E+ RE+PS S R +LNEN   G+LDI  LE R     D FQ  T S 
Sbjct: 387 SSTLCYSKRTPKKEIAREKPSDSCRTELNENILNGELDISPLEGRSRL--DHFQFPTASC 444

Query: 259 ALPQKRKVSDLSIGSKSRKLEGQGSKVSSQSLYTNIGHAQVECSSAMSINHGHADTSAPF 80
            LPQKRKVSD S   KS +LE    K+S +S  TN    +++ +SA SI++GHAD S+  
Sbjct: 445 VLPQKRKVSDFS-SIKSSELEVHDPKISPKSP-TNTRFERLKPTSATSIHYGHADASSTL 502

Query: 79  EGAARTNAKDNQHATPSKFMSLSYKK 2
           EGAA+TN++  QH  P K  SLSY +
Sbjct: 503 EGAAKTNSEVYQHGAPIKLTSLSYNR 528


>ref|XP_017696805.1| PREDICTED: BRCT domain-containing protein At4g02110 [Phoenix
           dactylifera]
          Length = 1168

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
 Frame = -3

Query: 541 GELSVPSDINLQKRSNALPSDVAATKIHSTSSRLDERCS---FSKKTPTMEVVREEPS-- 377
           G   +P DINL+K+ N L +D    K+ STSS L E+ S   +S++TP   V+ EE S  
Sbjct: 311 GSSFIPCDINLKKQDNKLSTD----KLGSTSSALAEQSSSLSYSRRTPKKSVLPEELSNM 366

Query: 376 --TSWRGDLNENN---------SKGDLDIELLETRRNYKPDLFQSSTTSSALPQKRKVSD 230
             +S  G + EN          + G  D++      +    +  +   S+ LPQKRK+S 
Sbjct: 367 SFSSPLGVMKENTLSFLREGTVNDGPADMQGPAATSS----IHDTEAISNGLPQKRKISL 422

Query: 229 LSIGSKSRKLEGQGSKVSS-QSLYTNIGHAQVECSSAMSINHGH---ADTSAPFEGAART 62
             +GSKS K E QGSK S+ QS    I  AQ+E ++A+  +         ++P E A+ +
Sbjct: 423 TRVGSKSPKSECQGSKSSAPQSPLACIRAAQLEFTTAIPQDKSDIVPRIINSPVEEASNS 482

Query: 61  NAKDNQHATPSKFMSLSYKK 2
           N+  NQ        SL Y+K
Sbjct: 483 NSVANQSKP-----SLIYRK 497


>ref|XP_010921524.1| PREDICTED: BRCT domain-containing protein At4g02110 [Elaeis
           guineensis]
          Length = 1181

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 70/218 (32%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
 Frame = -3

Query: 601 QEARSITQTSGYRNQHVVKDGELS-VPSDINLQKRSNALPSDVAATKIHSTSSRLDERC- 428
           QE  S     G+       DG L+ +P D NL K+ +      +  KI STSS L E+  
Sbjct: 303 QEEFSHHNAGGFEQAGDGYDGGLTFIPCDTNLNKQDDKF----STAKIGSTSSALAEKSG 358

Query: 427 --SFSKKTPTMEVVREEPSTSWRGDLNENNSKGDLDIELLETRRNYKP----------DL 284
             S+S++ P   +  E  + S    L     K +    L E R N  P           +
Sbjct: 359 SLSYSRRIPKSVLPEELSNNSLSSPLGV--MKENTPSVLREGRMNDDPADIQGAAANATI 416

Query: 283 FQSSTTSSALPQKRKVSDLSIGSKSRKLEGQGSKVSS-QSLYTNIGHAQVECSSAMSINH 107
            Q+   S+ LPQKRK+S   +GSKS K E QGSK SS QS    I   Q+E ++A+  + 
Sbjct: 417 HQTEAISNGLPQKRKISVTRVGSKSPKSECQGSKSSSPQSPLAYIRSVQLEPTTAIPQDK 476

Query: 106 GH---ADTSAPFEGAARTNAKDNQHATPSKFMSLSYKK 2
                 + ++P E A  +N+  NQ        SLSY+K
Sbjct: 477 SDIAPRNINSPVEEAGDSNSVANQSKP-----SLSYRK 509


Top