BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00031867
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272079.1| pentatricopeptide repeat-containing protein ...   137   6e-35
ref|XP_010911329.1| PREDICTED: pentatricopeptide repeat-containi...   102   1e-22
ref|XP_020098836.1| pentatricopeptide repeat-containing protein ...    99   2e-21
ref|XP_020596243.1| pentatricopeptide repeat-containing protein ...    97   7e-21
ref|XP_020596242.1| pentatricopeptide repeat-containing protein ...    97   7e-21
ref|XP_020596241.1| pentatricopeptide repeat-containing protein ...    97   8e-21
ref|XP_020596240.1| pentatricopeptide repeat-containing protein ...    97   8e-21
ref|XP_020697045.1| pentatricopeptide repeat-containing protein ...    95   5e-20
ref|XP_024027800.1| pentatricopeptide repeat-containing protein ...    88   2e-17
gb|EXB36428.1| hypothetical protein L484_009995 [Morus notabilis]      88   2e-17
ref|XP_010242769.1| PREDICTED: pentatricopeptide repeat-containi...    86   6e-17
ref|XP_021686864.1| pentatricopeptide repeat-containing protein ...    85   7e-17
gb|OVA03747.1| Pentatricopeptide repeat [Macleaya cordata]             86   8e-17
ref|XP_021686857.1| pentatricopeptide repeat-containing protein ...    85   1e-16
ref|XP_024173548.1| pentatricopeptide repeat-containing protein ...    86   1e-16
ref|XP_024173547.1| pentatricopeptide repeat-containing protein ...    86   1e-16
ref|XP_024173545.1| pentatricopeptide repeat-containing protein ...    86   1e-16
ref|XP_008218792.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_021800676.1| pentatricopeptide repeat-containing protein ...    84   4e-16
ref|XP_007225150.2| pentatricopeptide repeat-containing protein ...    84   4e-16

>ref|XP_020272079.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Asparagus officinalis]
 ref|XP_020272085.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Asparagus officinalis]
 ref|XP_020272089.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Asparagus officinalis]
 ref|XP_020272093.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Asparagus officinalis]
          Length = 681

 Score =  137 bits (345), Expect = 6e-35
 Identities = 71/123 (57%), Positives = 80/123 (65%)
 Frame = +3

Query: 42  IIGTNPRKNHSSAKRSSLFVLNCSKTLDKPPQSSTSTLSXXXXXXXXXXXXXXXXXDLDS 221
           +I +   KN +  +RS LF +NCSK LDKP  S                       DL S
Sbjct: 50  LISSKNPKNDAKLQRSGLFFVNCSKALDKPQTSPIFVADAKQAAIARVKSAS----DLSS 105

Query: 222 VLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIGISRN 401
            LS ADGILQVQDLNFILRYFGESRRWH++ QVFDWM KN  VNF SYSSFIKY+GISRN
Sbjct: 106 ALSSADGILQVQDLNFILRYFGESRRWHQVSQVFDWMLKNENVNFASYSSFIKYMGISRN 165

Query: 402 PMK 410
           P+K
Sbjct: 166 PLK 168


>ref|XP_010911329.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Elaeis guineensis]
 ref|XP_010911463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Elaeis guineensis]
          Length = 658

 Score =  102 bits (254), Expect = 1e-22
 Identities = 59/125 (47%), Positives = 73/125 (58%), Gaps = 9/125 (7%)
 Frame = +3

Query: 63  KNHSSAKRSSLFVLNCSKTLDKPPQSSTSTLSXXXXXXXXXXXXXXXXX---------DL 215
           +NH   +R    +   SKTLDKP  S+++  S                          DL
Sbjct: 27  RNHRYPRR----IPAVSKTLDKPHASTSAASSSSSPATIRPSNSSARRIAIAEVEASTDL 82

Query: 216 DSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIGIS 395
           DS LS  +GILQVQD N IL YFGE RRW E+ Q+FDWMQ++ ++NF SYSSFIKY+GIS
Sbjct: 83  DSTLSRVEGILQVQDYNNILCYFGELRRWTEVSQLFDWMQRHEKLNFSSYSSFIKYMGIS 142

Query: 396 RNPMK 410
            NPMK
Sbjct: 143 HNPMK 147


>ref|XP_020098836.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Ananas comosus]
          Length = 683

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 43/67 (64%), Positives = 56/67 (83%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLD+ LS  +GIL++QD N ILRYFGESRRW E+ Q+F+WMQK+ +++FVSYSS+ KYIG
Sbjct: 106 DLDAALSRVEGILRIQDYNIILRYFGESRRWSEMSQLFEWMQKHEKLDFVSYSSYFKYIG 165

Query: 390 ISRNPMK 410
           +S NP K
Sbjct: 166 VSCNPAK 172


>ref|XP_020596243.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X4 [Phalaenopsis equestris]
          Length = 589

 Score = 97.4 bits (241), Expect = 7e-21
 Identities = 46/67 (68%), Positives = 54/67 (80%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DL++ LS   GIL+V DLN ILRYFGESR W E+ Q+FDWMQKN  +NF SYSSFIKY+ 
Sbjct: 85  DLEASLSRVKGILRVHDLNIILRYFGESRWWREVNQLFDWMQKNEMLNFASYSSFIKYMR 144

Query: 390 ISRNPMK 410
           ISRNP+K
Sbjct: 145 ISRNPIK 151


>ref|XP_020596242.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X3 [Phalaenopsis equestris]
          Length = 598

 Score = 97.4 bits (241), Expect = 7e-21
 Identities = 46/67 (68%), Positives = 54/67 (80%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DL++ LS   GIL+V DLN ILRYFGESR W E+ Q+FDWMQKN  +NF SYSSFIKY+ 
Sbjct: 85  DLEASLSRVKGILRVHDLNIILRYFGESRWWREVNQLFDWMQKNEMLNFASYSSFIKYMR 144

Query: 390 ISRNPMK 410
           ISRNP+K
Sbjct: 145 ISRNPIK 151


>ref|XP_020596241.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X2 [Phalaenopsis equestris]
          Length = 649

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 46/67 (68%), Positives = 54/67 (80%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DL++ LS   GIL+V DLN ILRYFGESR W E+ Q+FDWMQKN  +NF SYSSFIKY+ 
Sbjct: 85  DLEASLSRVKGILRVHDLNIILRYFGESRWWREVNQLFDWMQKNEMLNFASYSSFIKYMR 144

Query: 390 ISRNPMK 410
           ISRNP+K
Sbjct: 145 ISRNPIK 151


>ref|XP_020596240.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X1 [Phalaenopsis equestris]
          Length = 658

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 46/67 (68%), Positives = 54/67 (80%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DL++ LS   GIL+V DLN ILRYFGESR W E+ Q+FDWMQKN  +NF SYSSFIKY+ 
Sbjct: 85  DLEASLSRVKGILRVHDLNIILRYFGESRWWREVNQLFDWMQKNEMLNFASYSSFIKYMR 144

Query: 390 ISRNPMK 410
           ISRNP+K
Sbjct: 145 ISRNPIK 151


>ref|XP_020697045.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like, partial [Dendrobium catenatum]
          Length = 701

 Score = 95.1 bits (235), Expect = 5e-20
 Identities = 46/67 (68%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DL++ LS    IL+VQDLN ILRYFGE RRW E+ Q+FDWMQK   +NF SYSSFIKY+ 
Sbjct: 147 DLEATLSRVKEILRVQDLNIILRYFGELRRWIEVNQLFDWMQKAEMLNFASYSSFIKYMR 206

Query: 390 ISRNPMK 410
           ISRNPMK
Sbjct: 207 ISRNPMK 213


>ref|XP_024027800.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Morus notabilis]
          Length = 654

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 38/67 (56%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           D  S LS  +G+L+VQDLN ILR+FG  +RWH+L Q+FDWMQ+N +++  SYSS+IK++G
Sbjct: 82  DCRSALSRLEGVLKVQDLNAILRHFGTRKRWHDLSQIFDWMQQNGKISASSYSSYIKFLG 141

Query: 390 ISRNPMK 410
            S NPM+
Sbjct: 142 ESLNPME 148


>gb|EXB36428.1| hypothetical protein L484_009995 [Morus notabilis]
          Length = 744

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 38/67 (56%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           D  S LS  +G+L+VQDLN ILR+FG  +RWH+L Q+FDWMQ+N +++  SYSS+IK++G
Sbjct: 82  DCRSALSRLEGVLKVQDLNAILRHFGTRKRWHDLSQIFDWMQQNGKISASSYSSYIKFLG 141

Query: 390 ISRNPMK 410
            S NPM+
Sbjct: 142 ESLNPME 148


>ref|XP_010242769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X2 [Nelumbo nucifera]
          Length = 659

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 40/67 (59%), Positives = 52/67 (77%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLDS L+ +  ILQVQDLN ILR+FG+  RW  + Q+FDWMQK+ +VN  SYSS+IK++G
Sbjct: 86  DLDSALARSGEILQVQDLNVILRHFGKLDRWQYVSQLFDWMQKHGKVNVASYSSYIKFMG 145

Query: 390 ISRNPMK 410
            S NP+K
Sbjct: 146 KSHNPVK 152


>ref|XP_021686864.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like isoform X2 [Hevea brasiliensis]
          Length = 337

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 37/67 (55%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLDS L   +G L+VQDLN ILR FG+  RW++L Q+FDWMQ+N++++  S+SS+IK++G
Sbjct: 89  DLDSALQRLEGTLKVQDLNVILRNFGKQSRWNDLSQLFDWMQQNDKISVASFSSYIKFMG 148

Query: 390 ISRNPMK 410
            S NPM+
Sbjct: 149 KSLNPMR 155


>gb|OVA03747.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 692

 Score = 85.9 bits (211), Expect = 8e-17
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           +LDS LS    +LQVQDLN ILR+FG+  RW ++ ++FDWM+K  ++N  SYSSFIK++G
Sbjct: 116 NLDSALSRFGAMLQVQDLNVILRHFGKLNRWQDVSKLFDWMKKRGKINIASYSSFIKFMG 175

Query: 390 ISRNPMK 410
            SRNP+K
Sbjct: 176 KSRNPIK 182


>ref|XP_021686857.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like isoform X1 [Hevea brasiliensis]
          Length = 383

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 37/67 (55%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLDS L   +G L+VQDLN ILR FG+  RW++L Q+FDWMQ+N++++  S+SS+IK++G
Sbjct: 89  DLDSALQRLEGTLKVQDLNVILRNFGKQSRWNDLSQLFDWMQQNDKISVASFSSYIKFMG 148

Query: 390 ISRNPMK 410
            S NPM+
Sbjct: 149 KSLNPMR 155


>ref|XP_024173548.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X3 [Rosa chinensis]
          Length = 587

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
 Frame = +3

Query: 108 CSKTLDK------PPQSSTSTL----SXXXXXXXXXXXXXXXXXDLDSVLSGADGILQVQ 257
           C+ TLDK      PP S T  +    S                 DL+S L+   G L+VQ
Sbjct: 39  CATTLDKEPLRRQPPNSDTRRVTRPHSKQYLARQSAILQVQQSSDLESALTRLGGSLKVQ 98

Query: 258 DLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIGISRNPMK 410
           DLN I+R+FG  +RWH+L Q+F+WMQ+N +++  SYSS+IK++G S NP+K
Sbjct: 99  DLNAIIRHFGMLKRWHDLSQLFEWMQQNGKISVSSYSSYIKFMGKSLNPVK 149


>ref|XP_024173547.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X2 [Rosa chinensis]
          Length = 636

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
 Frame = +3

Query: 108 CSKTLDK------PPQSSTSTL----SXXXXXXXXXXXXXXXXXDLDSVLSGADGILQVQ 257
           C+ TLDK      PP S T  +    S                 DL+S L+   G L+VQ
Sbjct: 39  CATTLDKEPLRRQPPNSDTRRVTRPHSKQYLARQSAILQVQQSSDLESALTRLGGSLKVQ 98

Query: 258 DLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIGISRNPMK 410
           DLN I+R+FG  +RWH+L Q+F+WMQ+N +++  SYSS+IK++G S NP+K
Sbjct: 99  DLNAIIRHFGMLKRWHDLSQLFEWMQQNGKISVSSYSSYIKFMGKSLNPVK 149


>ref|XP_024173545.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X1 [Rosa chinensis]
 ref|XP_024173546.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X1 [Rosa chinensis]
 gb|PRQ19886.1| putative tetratricopeptide-like helical domain-containing protein
           [Rosa chinensis]
          Length = 658

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
 Frame = +3

Query: 108 CSKTLDK------PPQSSTSTL----SXXXXXXXXXXXXXXXXXDLDSVLSGADGILQVQ 257
           C+ TLDK      PP S T  +    S                 DL+S L+   G L+VQ
Sbjct: 39  CATTLDKEPLRRQPPNSDTRRVTRPHSKQYLARQSAILQVQQSSDLESALTRLGGSLKVQ 98

Query: 258 DLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIGISRNPMK 410
           DLN I+R+FG  +RWH+L Q+F+WMQ+N +++  SYSS+IK++G S NP+K
Sbjct: 99  DLNAIIRHFGMLKRWHDLSQLFEWMQQNGKISVSSYSSYIKFMGKSLNPVK 149


>ref|XP_008218792.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Prunus mume]
          Length = 664

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 37/67 (55%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLDS L+   G L+VQDLN I+R+FG  +RWH+L Q+F+WMQ+N +++  SYSS+IK++G
Sbjct: 86  DLDSALTRLGGSLKVQDLNAIIRHFGILKRWHDLSQLFEWMQQNGKISASSYSSYIKFMG 145

Query: 390 ISRNPMK 410
            S NP+K
Sbjct: 146 KSLNPVK 152


>ref|XP_021800676.1| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Prunus avium]
          Length = 681

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 37/67 (55%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLDS L+   G L+VQDLN I+R+FG  +RWH+L Q+F+WMQ+N +++  SYSS+IK++G
Sbjct: 103 DLDSALTRLGGSLKVQDLNAIIRHFGILKRWHDLSQLFEWMQQNGKISASSYSSYIKFMG 162

Query: 390 ISRNPMK 410
            S NP+K
Sbjct: 163 KSLNPVK 169


>ref|XP_007225150.2| pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic isoform X1 [Prunus persica]
 gb|ONI36105.1| hypothetical protein PRUPE_1G569600 [Prunus persica]
          Length = 681

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 37/67 (55%), Positives = 53/67 (79%)
 Frame = +3

Query: 210 DLDSVLSGADGILQVQDLNFILRYFGESRRWHELCQVFDWMQKNNEVNFVSYSSFIKYIG 389
           DLDS L+   G L+VQDLN I+R+FG  +RWH+L Q+F+WMQ+N +++  SYSS+IK++G
Sbjct: 103 DLDSALTRLGGSLKVQDLNAIIRHFGILKRWHDLSQLFEWMQQNGKISASSYSSYIKFMG 162

Query: 390 ISRNPMK 410
            S NP+K
Sbjct: 163 KSLNPVK 169