BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00031863
         (557 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK80456.1| uncharacterized protein A4U43_C01F17900 [Asparagu...   330   e-107
ref|XP_020247400.1| pentatricopeptide repeat-containing protein ...   330   e-105
gb|PKA51663.1| Pentatricopeptide repeat-containing protein [Apos...   300   8e-94
gb|OAY84423.1| Pentatricopeptide repeat-containing protein DOT4,...   297   1e-92
ref|XP_020097557.1| pentatricopeptide repeat-containing protein ...   297   1e-92
ref|XP_008790066.1| PREDICTED: pentatricopeptide repeat-containi...   295   8e-92
ref|XP_013597041.1| PREDICTED: pentatricopeptide repeat-containi...   292   1e-90
ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containi...   292   1e-90
ref|XP_015576663.1| PREDICTED: pentatricopeptide repeat-containi...   292   1e-90
ref|XP_018515296.1| PREDICTED: pentatricopeptide repeat-containi...   291   1e-90
ref|XP_010246449.1| PREDICTED: pentatricopeptide repeat-containi...   291   2e-90
gb|PIA33963.1| hypothetical protein AQUCO_03900084v1 [Aquilegia ...   291   2e-90
emb|CBI30711.3| unnamed protein product, partial [Vitis vinifera]     287   3e-90
ref|XP_024160996.1| pentatricopeptide repeat-containing protein ...   291   3e-90
ref|XP_020691186.1| pentatricopeptide repeat-containing protein ...   290   9e-90
ref|XP_013728077.1| pentatricopeptide repeat-containing protein ...   289   1e-89
ref|XP_013726006.1| pentatricopeptide repeat-containing protein ...   289   2e-89
gb|KFK28546.1| hypothetical protein AALP_AA7G010600 [Arabis alpina]   288   2e-89
ref|XP_013700306.1| pentatricopeptide repeat-containing protein ...   288   2e-89
ref|XP_020597767.1| pentatricopeptide repeat-containing protein ...   288   3e-89

>gb|ONK80456.1| uncharacterized protein A4U43_C01F17900 [Asparagus officinalis]
          Length = 649

 Score =  330 bits (845), Expect = e-107
 Identities = 158/183 (86%), Positives = 169/183 (92%)
 Frame = -1

Query: 551 LLDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKE 372
           L D HV+NALVDMYAKCGAL  AR++F RI  KDLISWTVMIAGYGMHGHG EAINAFKE
Sbjct: 278 LSDLHVSNALVDMYAKCGALSFARKIFDRIIDKDLISWTVMIAGYGMHGHGREAINAFKE 337

Query: 371 MRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAG 192
           MR +GIEP+GA FISILYSCSHSGL+DEGWRFFNIMKHEYKIEPT++HYACMVDLLSRAG
Sbjct: 338 MRCQGIEPDGACFISILYSCSHSGLIDEGWRFFNIMKHEYKIEPTVQHYACMVDLLSRAG 397

Query: 191 RLTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLAN 12
           RLTKAY FIT MPIKPDS+IW +LLRACRIHRDVKLAE+VAEHVFELEPENT YYVLLAN
Sbjct: 398 RLTKAYNFITSMPIKPDSAIWESLLRACRIHRDVKLAERVAEHVFELEPENTSYYVLLAN 457

Query: 11  LYA 3
           LYA
Sbjct: 458 LYA 460



 Score = 80.5 bits (197), Expect = 3e-14
 Identities = 44/140 (31%), Positives = 79/140 (56%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           + NAL+DMY+KCG L  A+ LF R+  + ++SWT MI+GY  +G   EA+  F+ M  EG
Sbjct: 82  LVNALIDMYSKCGNLGSAKILFERMEDRSIVSWTSMISGYTRNGWFEEAMGLFEMMELEG 141

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
           I P+  +  S+L++C+ +G  D+G R  + +     +E  +     ++ + ++ G + +A
Sbjct: 142 ISPDLYAITSVLHACACNGSFDQGKRMHDFVARN-GLESNISVVNSLMHVYAKCGDM-EA 199

Query: 176 YKFITLMPIKPDSSIWGTLL 117
            + +     K D   W T++
Sbjct: 200 ARMVFDCANKKDIISWNTMI 219



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V N+L+ +YAKCG +  AR +F    KKD+ISW  MI G+  +   +EA+  F +M+   
Sbjct: 183 VVNSLMHVYAKCGDMEAARMVFDCANKKDIISWNTMIGGFSKNCLPNEALELFIKMQCHS 242

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
             PN  +   +L + +    +D+G      I++ E   +  L     +VD+ ++ G L+ 
Sbjct: 243 -RPNRVTMACVLPAVASLSSLDKGREMHAQILRAEDLSD--LHVSNALVDMYAKCGALSF 299

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIH 99
           A K    + I  D   W  ++    +H
Sbjct: 300 ARKIFDRI-IDKDLISWTVMIAGYGMH 325


>ref|XP_020247400.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            [Asparagus officinalis]
          Length = 885

 Score =  330 bits (845), Expect = e-105
 Identities = 158/183 (86%), Positives = 169/183 (92%)
 Frame = -1

Query: 551  LLDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKE 372
            L D HV+NALVDMYAKCGAL  AR++F RI  KDLISWTVMIAGYGMHGHG EAINAFKE
Sbjct: 514  LSDLHVSNALVDMYAKCGALSFARKIFDRIIDKDLISWTVMIAGYGMHGHGREAINAFKE 573

Query: 371  MRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAG 192
            MR +GIEP+GA FISILYSCSHSGL+DEGWRFFNIMKHEYKIEPT++HYACMVDLLSRAG
Sbjct: 574  MRCQGIEPDGACFISILYSCSHSGLIDEGWRFFNIMKHEYKIEPTVQHYACMVDLLSRAG 633

Query: 191  RLTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLAN 12
            RLTKAY FIT MPIKPDS+IW +LLRACRIHRDVKLAE+VAEHVFELEPENT YYVLLAN
Sbjct: 634  RLTKAYNFITSMPIKPDSAIWESLLRACRIHRDVKLAERVAEHVFELEPENTSYYVLLAN 693

Query: 11   LYA 3
            LYA
Sbjct: 694  LYA 696



 Score = 80.5 bits (197), Expect = 3e-14
 Identities = 44/140 (31%), Positives = 79/140 (56%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           + NAL+DMY+KCG L  A+ LF R+  + ++SWT MI+GY  +G   EA+  F+ M  EG
Sbjct: 318 LVNALIDMYSKCGNLGSAKILFERMEDRSIVSWTSMISGYTRNGWFEEAMGLFEMMELEG 377

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
           I P+  +  S+L++C+ +G  D+G R  + +     +E  +     ++ + ++ G + +A
Sbjct: 378 ISPDLYAITSVLHACACNGSFDQGKRMHDFVARN-GLESNISVVNSLMHVYAKCGDM-EA 435

Query: 176 YKFITLMPIKPDSSIWGTLL 117
            + +     K D   W T++
Sbjct: 436 ARMVFDCANKKDIISWNTMI 455



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V+NAL+  Y+KC  +  A ++F  +  KDL+SW  +I+G   +G     +  F EM S G
Sbjct: 217 VSNALIAFYSKCNRVDCAVQMFDGMLDKDLVSWNSIISGCVSNGLPLNGVELFAEMCSSG 276

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEY-KIEPTLEHYACMVDLLSRAGRLTK 180
           +  + A+ +S+L +CS    +  G          Y   E TL +   ++D+ S+ G L  
Sbjct: 277 VNLDLATLVSVLPACSEMSFIKMGQTIHGYSVKVYGNKEITLVN--ALIDMYSKCGNLGS 334

Query: 179 A 177
           A
Sbjct: 335 A 335



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V N+L+ +YAKCG +  AR +F    KKD+ISW  MI G+  +   +EA+  F +M+   
Sbjct: 419 VVNSLMHVYAKCGDMEAARMVFDCANKKDIISWNTMIGGFSKNCLPNEALELFIKMQCHS 478

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
             PN  +   +L + +    +D+G      I++ E   +  L     +VD+ ++ G L+ 
Sbjct: 479 -RPNRVTMACVLPAVASLSSLDKGREMHAQILRAEDLSD--LHVSNALVDMYAKCGALSF 535

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIH 99
           A K    + I  D   W  ++    +H
Sbjct: 536 ARKIFDRI-IDKDLISWTVMIAGYGMH 561


>gb|PKA51663.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 880

 Score =  300 bits (769), Expect = 8e-94
 Identities = 140/180 (77%), Positives = 162/180 (90%)
 Frame = -1

Query: 542  SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
            S V NALVDMYAKCGALLLARRLF RIA KD+ SWTVMIAGYGMHGHG EA+  FKEMR 
Sbjct: 542  SFVANALVDMYAKCGALLLARRLFERIAVKDIFSWTVMIAGYGMHGHGREALATFKEMRG 601

Query: 362  EGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLT 183
            +GI+P+G SFI++LYSCSHSGLVDEGWRFFN+M++E+KI+P +EHYACMVDLLSRAGRL+
Sbjct: 602  KGIKPDGVSFIALLYSCSHSGLVDEGWRFFNMMRNEFKIDPAVEHYACMVDLLSRAGRLS 661

Query: 182  KAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLYA 3
            KA+KFI  MPIKPD+++WG LL  CR HR+V+LAEKVAE VFELEPENTGYY+LLAN+YA
Sbjct: 662  KAFKFIESMPIKPDATVWGALLCGCRSHRNVELAEKVAERVFELEPENTGYYILLANIYA 721



 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           + N LVDMY+KC  +  A ++F ++ +K+++SWT M +G+ ++G   +AI  F+EM +EG
Sbjct: 343 LNNTLVDMYSKCRNVDNATQVFDKMGEKNIVSWTTMTSGFTINGAYQKAIALFEEMEAEG 402

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYA----CMVDLLSRAGR 189
           +E +     S L+ C+ SG +++G        H+Y +   LE        ++D+ ++ G 
Sbjct: 403 VELDLHFITSALHCCACSGSLNQGKHI-----HDYVVRNGLESNVFVANSLMDMYAKCGN 457

Query: 188 LTKAYKFITLMPIKPDSSIWGTLL 117
           +  A        IK D   W TL+
Sbjct: 458 MVDARLVFDCTSIK-DIISWNTLI 480



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V NA++  Y+KC ++ +AR++F  +  KD+++W  MI GY  +G    A   F EM + G
Sbjct: 242 VGNAIIAFYSKCSSMNVARKVFDEMPLKDIVTWNSMIHGYVSNGFAKAACEFFTEMWASG 301

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
           +E + A+ +S++ +CS  G + EG     + +K  +  E +L +   +VD+ S+   +  
Sbjct: 302 MEIDLATMVSVIPACSKMGFLAEGQALHGHSIKSGFVKEVSLNN--TLVDMYSKCRNVDN 359

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIH----RDVKLAEKVAEHVFELE 48
           A +    M  K   S W T+     I+    + + L E++     EL+
Sbjct: 360 ATQVFDKMGEKNIVS-WTTMTSGFTINGAYQKAIALFEEMEAEGVELD 406



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V N+L+DMYAKCG ++ AR +F   + KD+ISW  +I GY  +   +EA+  F +M+ + 
Sbjct: 444 VANSLMDMYAKCGNMVDARLVFDCTSIKDIISWNTLIGGYSKNSLPNEALALFAKMQ-QH 502

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
            +PN  +    L + +    +D+G     ++++  Y+    + +   +VD+ ++ G L  
Sbjct: 503 YKPNTITMACTLRASASLSALDKGREIHAHVVRSGYQECSFVAN--ALVDMYAKCGALLL 560

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIH 99
           A +    + +K D   W  ++    +H
Sbjct: 561 ARRLFERIAVK-DIFSWTVMIAGYGMH 586



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
 Frame = -1

Query: 548 LDSHVTNALVDMYAKCGALLLARRLFVRIAKKD-LISWTVMIAGYGMHGHGSEAINAFKE 372
           +DS V + LV MY KCG L   RR F R+  +D    W+++++ Y   G   E+I+ F +
Sbjct: 135 IDSEVGSQLVFMYVKCGELGEGRRAFDRLPSRDHPFPWSLLMSKYADIGEFDESISLFIK 194

Query: 371 MRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAG 192
           M   G +PN  +F  IL   +  G +  G      ++       ++     ++   S+  
Sbjct: 195 MWESGTKPNSHTFSCILKCLAAIGSIRLGMTVHGYLQKLDLFRRSVAVGNAIIAFYSKCS 254

Query: 191 RLTKAYKFITLMPIKPDSSIWGTLL 117
            +  A K    MP+K D   W +++
Sbjct: 255 SMNVARKVFDEMPLK-DIVTWNSMI 278


>gb|OAY84423.1| Pentatricopeptide repeat-containing protein DOT4, chloroplastic
            [Ananas comosus]
          Length = 870

 Score =  297 bits (761), Expect = 1e-92
 Identities = 143/181 (79%), Positives = 159/181 (87%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            DS+V NALVDMYAKCGALLLAR  F R+  K+LISWT+MIAGYGMHGHG +AI  FKEMR
Sbjct: 532  DSYVANALVDMYAKCGALLLARMHFNRMFGKNLISWTMMIAGYGMHGHGQDAIALFKEMR 591

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             +GI P+  SFI+ILY+CSHSGL+DEGWRFFNIM++EYKIEP LEHYACMVDLLSRAGRL
Sbjct: 592  CKGIVPDDVSFIAILYACSHSGLIDEGWRFFNIMRNEYKIEPKLEHYACMVDLLSRAGRL 651

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
             KAYKFI  MPI+PDS+IWG LL  CRIHRDVKLAE VAE VFELEP+NTGYYVLLAN+Y
Sbjct: 652  NKAYKFIEAMPIEPDSTIWGALLCGCRIHRDVKLAETVAEKVFELEPQNTGYYVLLANIY 711

Query: 5    A 3
            A
Sbjct: 712  A 712



 Score = 79.3 bits (194), Expect = 8e-14
 Identities = 43/140 (30%), Positives = 81/140 (57%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           ++N+L+DMY+KC  L  A +LF ++ ++ ++SWT MI  Y   G   EAI+ F+EM S G
Sbjct: 334 LSNSLIDMYSKCSNLGSAVQLFEKMDQRSVVSWTAMITAYTRDGQYDEAISLFEEMESRG 393

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
           ++P+  +  S+L++CS  G ++ G +F +    +  ++  L     ++D+ ++ G +  A
Sbjct: 394 VKPDQFAVTSVLHACSCKGSLNHG-KFVHDSIVKSGMKKNLFVANALMDMYAKCGDMENA 452

Query: 176 YKFITLMPIKPDSSIWGTLL 117
            + +    +K D   W TL+
Sbjct: 453 -RSVFDQTVKKDLISWNTLI 471



 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 36/84 (42%), Positives = 51/84 (60%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V NAL+DMYAKCG +  AR +F +  KKDLISW  +I GY  +   +EA++ F EM+S  
Sbjct: 435 VANALMDMYAKCGDMENARSVFDQTVKKDLISWNTLIGGYSKNNLPNEALHLFGEMQSH- 493

Query: 356 IEPNGASFISILYSCSHSGLVDEG 285
             PN  +   IL +C+    ++ G
Sbjct: 494 FRPNSVTMACILPACASLSSLERG 517


>ref|XP_020097557.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            [Ananas comosus]
          Length = 877

 Score =  297 bits (761), Expect = 1e-92
 Identities = 143/181 (79%), Positives = 159/181 (87%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            DS+V NALVDMYAKCGALLLAR  F R+  K+LISWT+MIAGYGMHGHG +AI  FKEMR
Sbjct: 539  DSYVANALVDMYAKCGALLLARMHFNRMFGKNLISWTMMIAGYGMHGHGQDAIALFKEMR 598

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             +GI P+  SFI+ILY+CSHSGL+DEGWRFFNIM++EYKIEP LEHYACMVDLLSRAGRL
Sbjct: 599  CKGIVPDDVSFIAILYACSHSGLIDEGWRFFNIMRNEYKIEPKLEHYACMVDLLSRAGRL 658

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
             KAYKFI  MPI+PDS+IWG LL  CRIHRDVKLAE VAE VFELEP+NTGYYVLLAN+Y
Sbjct: 659  NKAYKFIEAMPIEPDSTIWGALLCGCRIHRDVKLAETVAEKVFELEPQNTGYYVLLANIY 718

Query: 5    A 3
            A
Sbjct: 719  A 719



 Score = 79.3 bits (194), Expect = 8e-14
 Identities = 43/140 (30%), Positives = 81/140 (57%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           ++N+L+DMY+KC  L  A +LF ++ ++ ++SWT MI  Y   G   EAI+ F+EM S G
Sbjct: 341 LSNSLIDMYSKCSNLGSAVQLFEKMDQRSVVSWTAMITAYTRDGQYDEAISLFEEMESRG 400

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
           ++P+  +  S+L++CS  G ++ G +F +    +  ++  L     ++D+ ++ G +  A
Sbjct: 401 VKPDQFAVTSVLHACSCKGSLNHG-KFVHDSIVKSGMKKNLFVANALMDMYAKCGDMENA 459

Query: 176 YKFITLMPIKPDSSIWGTLL 117
            + +    +K D   W TL+
Sbjct: 460 -RSVFDQTVKKDLISWNTLI 478



 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 36/84 (42%), Positives = 51/84 (60%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V NAL+DMYAKCG +  AR +F +  KKDLISW  +I GY  +   +EA++ F EM+S  
Sbjct: 442 VANALMDMYAKCGDMENARSVFDQTVKKDLISWNTLIGGYSKNNLPNEALHLFGEMQSH- 500

Query: 356 IEPNGASFISILYSCSHSGLVDEG 285
             PN  +   IL +C+    ++ G
Sbjct: 501 FRPNSVTMACILPACASLSSLERG 524


>ref|XP_008790066.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Phoenix dactylifera]
          Length = 877

 Score =  295 bits (755), Expect = 8e-92
 Identities = 139/181 (76%), Positives = 156/181 (86%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D +V NALVDMYAKCGALLLAR LF R++KKDLISWTVMIAGYGMHGHG  AI  FKEM 
Sbjct: 539  DGYVANALVDMYAKCGALLLARILFDRMSKKDLISWTVMIAGYGMHGHGKNAIAVFKEMS 598

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
              G+EP+  SF  ILY+CSHSGL+ EGW F+NIM++EYKIEP LEHYACMVDLLSRAG L
Sbjct: 599  GSGVEPDEVSFTVILYACSHSGLIYEGWEFYNIMRNEYKIEPRLEHYACMVDLLSRAGHL 658

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
             KAY+FI  MP+KPDS++WG LL  CRIHR+VKLAE+VAEHVFELEPENTGYYVLLAN+Y
Sbjct: 659  AKAYEFIKSMPVKPDSTVWGALLCGCRIHRNVKLAERVAEHVFELEPENTGYYVLLANIY 718

Query: 5    A 3
            A
Sbjct: 719  A 719



 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 47/140 (33%), Positives = 75/140 (53%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V+N+LVDMY+KC +L  A R+F R+ ++ ++SWT MI      G   EAI  F EM S G
Sbjct: 341 VSNSLVDMYSKCWSLEGASRIFERMVQRSVVSWTSMIQASTRAGLFDEAIALFGEMESLG 400

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
           + P+  +  S L++C+ SG +D+G    + +    ++E  L     ++D+ S+ G +  A
Sbjct: 401 VRPDLFAVTSALHACACSGSLDQGKNIHDYIVRN-RVEKNLFVANALMDMYSKCGSMEDA 459

Query: 176 YKFITLMPIKPDSSIWGTLL 117
                    K   S W TL+
Sbjct: 460 RSVFDNTTSKNIIS-WNTLI 478



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V NAL+DMY+KCG++  AR +F     K++ISW  +I GY  +   +EA++ F EM+   
Sbjct: 442 VANALMDMYSKCGSMEDARSVFDNTTSKNIISWNTLIGGYSKNHFPNEALSLFSEMQVH- 500

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
           + PN  +   IL + +    +++G     +I++  +  +  + +   +VD+ ++ G L  
Sbjct: 501 MRPNSVTMACILPAAASLSSLEKGREIHGHILRSGHFSDGYVAN--ALVDMYAKCGALLL 558

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHV--FELEPENTGYYVLL 18
           A      M  K D   W  ++    +H   K A  V + +    +EP+   + V+L
Sbjct: 559 ARILFDRMS-KKDLISWTVMIAGYGMHGHGKNAIAVFKEMSGSGVEPDEVSFTVIL 613



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
 Frame = -1

Query: 524 LVDMYAKCGALLLARRLFVRIAKKD-LISWTVMIAGYGMHGHGSEAINAFKEMRSEGIEP 348
           LV MY KCG L   RR+F   A KD +  W +++  Y   G   E+I+ F+EM+   ++P
Sbjct: 142 LVFMYVKCGDLREGRRVFDWSAAKDHIFPWNLLLNEYAKVGDFDESIDLFREMQYSSVKP 201

Query: 347 NGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTKAYK 171
           +  +F   L   + SG V EG +   +++K  +     + +   ++   S+  R+T A  
Sbjct: 202 DSYTFSLTLKCFATSGGVSEGEQVHGSLIKLGFGAYNAVGN--ALIAFYSKCNRITSAID 259

Query: 170 FITLMPIKPDSSIWGTLLRAC 108
               MP + D   W +L+  C
Sbjct: 260 VFDEMPDR-DVISWNSLINGC 279


>ref|XP_013597041.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Brassica oleracea var. oleracea]
          Length = 870

 Score =  292 bits (747), Expect = 1e-90
 Identities = 138/181 (76%), Positives = 155/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV N+LVDMYAKCGALLLAR LF  IA KDL+SWTVMIAGYGMHG G EAI  F + R
Sbjct: 532  DRHVANSLVDMYAKCGALLLARLLFNEIASKDLVSWTVMIAGYGMHGFGKEAIALFNQKR 591

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             EGIEP+  SF+S+LY+CSHSGLVDEGWRFFNIM+HE KIEPTLEHYAC+VD+L+R G L
Sbjct: 592  REGIEPDEISFVSVLYACSHSGLVDEGWRFFNIMRHECKIEPTLEHYACVVDMLARTGDL 651

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            +KAY+FI  MPI PD++IWG LL  CRIH DVKLAEKVAE VFELEPENTGYYVL+AN+Y
Sbjct: 652  SKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAERVFELEPENTGYYVLMANIY 711

Query: 5    A 3
            A
Sbjct: 712  A 712



 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM-RSEGI 354
           N L+DMY+KCG L  A+ +F  ++ + ++S+T MIAGY   G   EA+  F EM   EGI
Sbjct: 333 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGI 392

Query: 353 EPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
            P+  +  ++L  C+ + L++EG R    I +++   +  L +   ++D+ ++ G + +A
Sbjct: 393 SPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEA 450

Query: 176 YKFITLMPIKPDSSIWGTLL 117
               + MP++ D   W T++
Sbjct: 451 EIVFSEMPVR-DIISWNTII 469



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  ++NAL+DMYAKCG++  A  +F  +  +D+ISW  +I GY  + + +EA++ F  + 
Sbjct: 430 DIFLSNALMDMYAKCGSMGEAEIVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLL 489

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTL---EHYA-CMVDLLS 201
            E    P+  + + +L +C+     D+G        H Y +        H A  +VD+ +
Sbjct: 490 EEKRFVPDERTVVCVLPACASLSAFDKGREI-----HGYIVRNGFFRDRHVANSLVDMYA 544

Query: 200 RAGRLTKAYKFITLMPIKPDSSIWGTLLRACRIH 99
           + G L  A      +  K D   W  ++    +H
Sbjct: 545 KCGALLLARLLFNEIASK-DLVSWTVMIAGYGMH 577


>ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Tarenaya hassleriana]
          Length = 872

 Score =  292 bits (747), Expect = 1e-90
 Identities = 138/181 (76%), Positives = 154/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV N+LVDMYAKCGAL  AR LF  I  KDL+SWTVMIAGYGMHG G+EAI+ F EMR
Sbjct: 534  DRHVANSLVDMYAKCGALKFARLLFDDIVSKDLVSWTVMIAGYGMHGFGNEAIDMFNEMR 593

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
              GIEP+  SF+S+LY+CSHSGL+DEGWRFFNIM+HE KIEPTLEHYACMVDLL+R G L
Sbjct: 594  KAGIEPDEISFVSVLYACSHSGLLDEGWRFFNIMRHECKIEPTLEHYACMVDLLARTGNL 653

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            +KAY+FI  MPI PDS+IWG LL  CRIH DVKLAEKVAE VFELEPENTGYYVL+AN+Y
Sbjct: 654  SKAYRFIEKMPIPPDSTIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 713

Query: 5    A 3
            A
Sbjct: 714  A 714



 Score = 84.7 bits (208), Expect = 1e-15
 Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEGIE 351
           N L+DMY+KCG L  A+ +F +++ +  +S+T MIAGY   G   EA+  F EM  EGI 
Sbjct: 336 NTLLDMYSKCGDLGSAKAVFEQMSDRSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGIS 395

Query: 350 PNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKAYK 171
           P+  +  ++L  C+ +GL++EG +  + ++ E  ++  L     ++D+ ++ G + +A  
Sbjct: 396 PDVYTVTAVLNCCARNGLLEEGGQVHDWIR-ENDMDFDLFVSNALMDMYAKCGSMEEARL 454

Query: 170 FITLMPIKPDSSIWGTLL----RACRIHRDVKLAEKVAEHVFELEPENTGYYVLLA 15
             + MP+K D   W T++    + C  +  + L   + E       E T   VL A
Sbjct: 455 VFSEMPVK-DIVSWNTVIGGYSKNCFANEALSLFSAMLEECQSRPDERTMVCVLPA 509



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  V+NAL+DMYAKCG++  AR +F  +  KD++SW  +I GY  +   +EA++ F  M 
Sbjct: 432 DLFVSNALMDMYAKCGSMEEARLVFSEMPVKDIVSWNTVIGGYSKNCFANEALSLFSAML 491

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYA-CMVDLLSRA 195
            E    P+  + + +L +C+     D+G    + IM++ Y  +    H A  +VD+ ++ 
Sbjct: 492 EECQSRPDERTMVCVLPACASVAAFDKGREIHSYIMRNRYFSD---RHVANSLVDMYAKC 548

Query: 194 GRLTKAYKFITLM---PIKPDSSIWGTLLRACRIH 99
           G    A KF  L+    +  D   W  ++    +H
Sbjct: 549 G----ALKFARLLFDDIVSKDLVSWTVMIAGYGMH 579


>ref|XP_015576663.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Ricinus communis]
 ref|XP_015576664.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Ricinus communis]
          Length = 874

 Score =  292 bits (747), Expect = 1e-90
 Identities = 139/180 (77%), Positives = 155/180 (86%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV NAL+DMYAKCGAL LAR  F  I  KDLISWTVMIAGYGMHG G EAI+AF EMR
Sbjct: 536  DLHVANALIDMYAKCGALALARLFFDMIPVKDLISWTVMIAGYGMHGFGKEAISAFYEMR 595

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             EGIEP+  SFISILY+CSHSGL++EGW+FFNIM+HEY IEP LEHYAC+VDLL+R GRL
Sbjct: 596  QEGIEPDEISFISILYACSHSGLLNEGWKFFNIMQHEYHIEPKLEHYACVVDLLARTGRL 655

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            + AYKFI  MPI+PD++IWG LL  CRIH DVKLAEKVAEHVFELEPENTGYYVLL+N+Y
Sbjct: 656  SMAYKFIKSMPIEPDATIWGALLCGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLSNIY 715



 Score = 82.8 bits (203), Expect = 5e-15
 Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
 Frame = -1

Query: 557 KGLLDSHVT--NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAIN 384
           K  LD  +T  N L+DMY+KCG L  A R+F ++ ++ ++SWT +IAGY   G   E I 
Sbjct: 329 KAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGLSGEGIR 388

Query: 383 AFKEMRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTL--EHYAC--M 216
            F EM  EG+ P+  +  ++L++C+ SG ++ G        H+Y  E  +  +   C  +
Sbjct: 389 LFHEMEREGVRPDNFTVTAVLHACACSGSLEIGKDV-----HDYVKENNMQKDRIVCNSL 443

Query: 215 VDLLSRAGRLTKAYKFITLMPIKPDSSIWGTLL 117
           +D+ ++ G +  A      MP K D   W T++
Sbjct: 444 MDMYAKCGSMEDANLVFLEMPNK-DIVSWNTMI 475



 Score = 79.7 bits (195), Expect = 6e-14
 Identities = 44/149 (29%), Positives = 78/149 (52%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  V N+L+DMYAKCG++  A  +F+ +  KD++SW  MI GY  +G  +E ++ F  M 
Sbjct: 436 DRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRPNETLHLFVAMV 495

Query: 365 SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
            E ++P+G +   IL +C+    +D G      ++     +  L     ++D+ ++ G L
Sbjct: 496 QE-LKPDGRTMACILPACASLAALDRGREIHGYIQRNGCFD-DLHVANALIDMYAKCGAL 553

Query: 185 TKAYKFITLMPIKPDSSIWGTLLRACRIH 99
             A  F  ++P+K D   W  ++    +H
Sbjct: 554 ALARLFFDMIPVK-DLISWTVMIAGYGMH 581


>ref|XP_018515296.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Brassica rapa]
          Length = 868

 Score =  291 bits (746), Expect = 1e-90
 Identities = 137/181 (75%), Positives = 155/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV N+LVDMYAKCGALLLAR LF  IA KDL+SWTVMIAGYGMHG G EAI  F + R
Sbjct: 530  DRHVANSLVDMYAKCGALLLARLLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFDQKR 589

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             EGIEP+  SF+S+LY+CSHSGLVDEGWRFFNIM+HE KIEPTLEHYAC+VD+L+R G L
Sbjct: 590  REGIEPDEISFVSVLYACSHSGLVDEGWRFFNIMRHECKIEPTLEHYACVVDMLARTGEL 649

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            +KAY+FI  MPI PD++IWG LL  CRIH DVKLAE+VAE VFELEPENTGYYVL+AN+Y
Sbjct: 650  SKAYRFIESMPIPPDATIWGALLCGCRIHHDVKLAERVAERVFELEPENTGYYVLMANIY 709

Query: 5    A 3
            A
Sbjct: 710  A 710



 Score = 79.3 bits (194), Expect = 8e-14
 Identities = 43/139 (30%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEGIE 351
           N L+DMY+KC  L  A+ +F +++ + ++S+T MIAGY   G   EA+  F EM  EGI 
Sbjct: 332 NTLLDMYSKCSDLDSAKAVFTKMSDRSVVSYTSMIAGYAREGLAGEAVKLFAEMEEEGIS 391

Query: 350 PNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTKAY 174
           P+  +  ++L  C+ + L++EG R    I +++   +  L +   ++D+ ++ G + +A 
Sbjct: 392 PDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEAE 449

Query: 173 KFITLMPIKPDSSIWGTLL 117
              + MP++ D   W T++
Sbjct: 450 IVFSEMPVR-DIISWNTII 467



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  ++NAL+DMYAKCG++  A  +F  +  +D+ISW  +I GY  + + +EA++ F  + 
Sbjct: 428 DIFLSNALMDMYAKCGSMGEAEIVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLL 487

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYA-CMVDLLSRA 195
            E    P+  + + +L +C+     D+G      IM++ +  +    H A  +VD+ ++ 
Sbjct: 488 EEKRFVPDERTVVCVLPACASLSAFDKGREIHGYIMRNGFFRD---RHVANSLVDMYAKC 544

Query: 194 GRLTKA 177
           G L  A
Sbjct: 545 GALLLA 550



 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
 Frame = -1

Query: 542 SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
           S V N+L+  Y K G +  AR++F  + ++D+ISW  MI GY   G   + +  F EM  
Sbjct: 227 SSVGNSLLAFYLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLYLFVEMLC 286

Query: 362 EGIEPNGASFISILYSCSHSGLVDEGW---------------RFFNIMKHEYK------- 249
            GIE + A+ +S+   C+ S LV  G                RF N +   Y        
Sbjct: 287 SGIEFDLATVVSVFAGCADSCLVSLGRAVHGIGLKACMSREDRFCNTLLDMYSKCSDLDS 346

Query: 248 --------IEPTLEHYACMVDLLSRAGRLTKAYKFITLMP---IKPDSSIWGTLLRACRI 102
                    + ++  Y  M+   +R G   +A K    M    I PD      +L  C  
Sbjct: 347 AKAVFTKMSDRSVVSYTSMIAGYAREGLAGEAVKLFAEMEEEGISPDVYTVTAVLNCCAR 406

Query: 101 HRDVKLAEKVAEHVFELEPENTGYYVLLAN 12
           +R ++  ++V E + E    + G+ + L+N
Sbjct: 407 NRLLEEGKRVHEWIKE---NDMGFDIFLSN 433


>ref|XP_010246449.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Nelumbo nucifera]
          Length = 873

 Score =  291 bits (746), Expect = 2e-90
 Identities = 137/181 (75%), Positives = 156/181 (86%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D +V NALVDMY KCGAL+ ARRLF R+  KDLISWTVMI+GYGMHG G E I+ F EMR
Sbjct: 537  DLYVANALVDMYVKCGALVHARRLFDRMPTKDLISWTVMISGYGMHGCGREVISVFNEMR 596

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
              G+EPNG SFISILY+CSHSGL+DEGWRFFNIMK++ KIEP L+HYACMVDLL+RAG L
Sbjct: 597  RTGVEPNGLSFISILYACSHSGLIDEGWRFFNIMKNDCKIEPKLDHYACMVDLLARAGHL 656

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            TKAYKFI +MPIKPDS++WG LL  CRIH DVKLAE+VAE +FELEPENT YYVLL+N+Y
Sbjct: 657  TKAYKFIQMMPIKPDSTVWGALLFGCRIHHDVKLAERVAEQIFELEPENTRYYVLLSNIY 716

Query: 5    A 3
            A
Sbjct: 717  A 717



 Score = 94.7 bits (234), Expect = 4e-19
 Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
 Frame = -1

Query: 557 KGLLDSHVT--NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAIN 384
           K   DS VT  N L+D+Y+KCG L  A R+FV++ K+ ++SWT M+AGY   G    AIN
Sbjct: 330 KAHFDSEVTFNNTLLDLYSKCGDLDAATRVFVKMDKRSVVSWTSMMAGYTREGQYDRAIN 389

Query: 383 AFKEMRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYA----CM 216
            FKEM  EGI+P+  +  SIL++C+ +G ++ G        H Y     L+ +      +
Sbjct: 390 LFKEMEEEGIKPDIFTITSILHACACNGSLESGKDV-----HNYVRSSNLQFHVFVANAI 444

Query: 215 VDLLSRAGRLTKAYKFITLMPIKPDSSIWGTLL 117
           +D+ ++ G +  A      MP++ D+  W T++
Sbjct: 445 MDMYAKCGSMEDARSVFDQMPVR-DTVSWNTMI 476



 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V NA++DMYAKCG++  AR +F ++  +D +SW  MI GY  +   ++A+  F +M++E 
Sbjct: 440 VANAIMDMYAKCGSMEDARSVFDQMPVRDTVSWNTMIGGYSRNCLPNDALGLFIQMQNE- 498

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
           ++PN  +   +L +C+    +  G     ++M++ +  +  + +   +VD+  + G L  
Sbjct: 499 LKPNVVTMACVLPACASLSALKRGQEIHSHVMRNGFFSDLYVAN--ALVDMYVKCGALVH 556

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIH 99
           A +    MP K D   W  ++    +H
Sbjct: 557 ARRLFDRMPTK-DLISWTVMISGYGMH 582



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
 Frame = -1

Query: 542 SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
           S V N+L+  Y+KC  +  AR +F  ++ +D ISW  MI+GY  +G   E +  F +M  
Sbjct: 236 SAVGNSLIAFYSKCKKIQSAREVFDELSDRDTISWNSMISGYVSNGLAEEGLKLFIQMPL 295

Query: 362 EGIEPNGASFISILYSCSHSG--LVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGR 189
            G++ +  + ISIL +C+  G   +      + I  H +  E T  +   ++DL S+ G 
Sbjct: 296 SGVDLDLTTMISILPACAEIGSLYLCRALHGYGIKAH-FDSEVTFNN--TLLDLYSKCGD 352

Query: 188 LTKAYKFITLM 156
           L  A +    M
Sbjct: 353 LDAATRVFVKM 363


>gb|PIA33963.1| hypothetical protein AQUCO_03900084v1 [Aquilegia coerulea]
 gb|PIA33965.1| hypothetical protein AQUCO_03900085v1 [Aquilegia coerulea]
 gb|PIA33966.1| hypothetical protein AQUCO_03900085v1 [Aquilegia coerulea]
          Length = 877

 Score =  291 bits (746), Expect = 2e-90
 Identities = 140/182 (76%), Positives = 157/182 (86%)
 Frame = -1

Query: 548  LDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM 369
            LD +VTNALVDMYAKCGALLLARRLF  I  KDL+SWT+MIAGYGMHG+G +AI    EM
Sbjct: 538  LDPYVTNALVDMYAKCGALLLARRLFDMIPVKDLVSWTIMIAGYGMHGYGRDAITTLDEM 597

Query: 368  RSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGR 189
            RS GIEP+G +FI+ILY+CSHSGLV+EGWRFFNIM +  KIE  LEHYACMVDLL+RAGR
Sbjct: 598  RSSGIEPDGTAFIAILYACSHSGLVEEGWRFFNIMTYCCKIEAKLEHYACMVDLLARAGR 657

Query: 188  LTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANL 9
            LTKA+KFI  MPI+PDS+IWG LL  CR HRDV LAEKVAE VFE+EPENTGYYVLLAN+
Sbjct: 658  LTKAFKFIEAMPIEPDSTIWGALLDGCRTHRDVSLAEKVAEKVFEIEPENTGYYVLLANI 717

Query: 8    YA 3
            YA
Sbjct: 718  YA 719



 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
 Frame = -1

Query: 554 GLLDS-HVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAF 378
           GLL +  V NAL DMYAKC ++  A+ +F ++  +D ISW  +I GY  +   +EA+  F
Sbjct: 435 GLLSNLFVANALTDMYAKCRSMEDAQYVFNQMLVRDTISWNTIIGGYSKNSFPNEALRLF 494

Query: 377 KEMRSEGIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLS 201
           KEM+ E   PNG +   IL +C+    +D G      I+++   ++P + +   +VD+ +
Sbjct: 495 KEMQLE-CTPNGITMACILPACASLSALDRGREIHGYILRNGLSLDPYVTN--ALVDMYA 551

Query: 200 RAGRLTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFE--LEPENTGYY 27
           + G L  A +   ++P+K D   W  ++    +H   + A    + +    +EP+ T + 
Sbjct: 552 KCGALLLARRLFDMIPVK-DLVSWTIMIAGYGMHGYGRDAITTLDEMRSSGIEPDGTAFI 610

Query: 26  VLL 18
            +L
Sbjct: 611 AIL 613



 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           ++NAL+DMYAKC  L  A ++   + KK ++SWT M++GY   G   +A+  F +M++ G
Sbjct: 341 ISNALLDMYAKCCDLDSAVQVLESLEKKSVVSWTSMLSGYARQGQCEKAVELFWKMQAVG 400

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
           +EP+  +  SIL+ C+ SG ++ G    + IMKH   +   L     + D+ ++   +  
Sbjct: 401 VEPDLFTVTSILHVCACSGSLEYGKDVHDYIMKH--GLLSNLFVANALTDMYAKCRSMED 458

Query: 179 AYKFITLMPIKPDSSIWGTLL 117
           A      M ++ D+  W T++
Sbjct: 459 AQYVFNQMLVR-DTISWNTII 478



 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 28/84 (33%), Positives = 51/84 (60%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           + NAL+  Y+KC  +  AR++F  ++ +D+ISW  +I+GY ++G   +A+  F  MR  G
Sbjct: 239 IGNALIGFYSKCKKMKSARKVFDEMSDRDVISWNSIISGYLLNGITRQALKLFSSMRFSG 298

Query: 356 IEPNGASFISILYSCSHSGLVDEG 285
            + +  + IS+L +C+  G +  G
Sbjct: 299 FDVDVVTMISVLPACAERGTLSFG 322



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%)
 Frame = -1

Query: 548 LDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM 369
           +DS + + LV MY  CG L   RR+F  I  + +  W  +I+ Y   G+  E++  FKEM
Sbjct: 134 VDSVIGSKLVFMYLNCGDLNEGRRVFDIIKNEKVFMWNFIISEYAKIGNYKESVGLFKEM 193

Query: 368 RSEGIEPNGASFISILYSCSHSGLVDEG 285
           R  G+EPN  +F  +L      G   EG
Sbjct: 194 REMGVEPNYYTFSCVLKCFGALGSFVEG 221


>emb|CBI30711.3| unnamed protein product, partial [Vitis vinifera]
          Length = 697

 Score =  287 bits (734), Expect = 3e-90
 Identities = 138/182 (75%), Positives = 157/182 (86%)
 Frame = -1

Query: 548 LDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM 369
           LD HV NALVDMY KCGAL LAR LF  I +KDL+SWTVMIAGYGMHG+GSEAI AF EM
Sbjct: 358 LDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 417

Query: 368 RSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGR 189
           R+ GIEP+  SFISILY+CSHSGL+DEGW FFN+M++   IEP  EHYAC+VDLL+RAG 
Sbjct: 418 RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGN 477

Query: 188 LTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANL 9
           L+KAYKFI +MPI+PD++IWG LL  CRI+ DVKLAEKVAEHVFELEPENTGYYVLLAN+
Sbjct: 478 LSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANI 537

Query: 8   YA 3
           YA
Sbjct: 538 YA 539



 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           + N L+DMY+K G L  A ++F  + ++ ++SWT MIAGY   G    ++  F EM  E 
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKED 320

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFF-NIMKHEYKIEPTLEHYA-CMVDLLSRAGRLT 183
           + PN  +   IL +C+    ++ G     +I+++ + ++    H A  +VD+  + G L 
Sbjct: 321 LFPNSITMACILPACASLAALERGQEIHGHILRNGFSLD---RHVANALVDMYLKCGALG 377

Query: 182 KAYKFITLMPIKPDSSIWGTLLRACRIH 99
            A     ++P K D   W  ++    +H
Sbjct: 378 LARLLFDMIPEK-DLVSWTVMIAGYGMH 404


>ref|XP_024160996.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic [Rosa
            chinensis]
 gb|PRQ29211.1| putative tetratricopeptide-like helical domain, DYW domain-containing
            protein [Rosa chinensis]
          Length = 879

 Score =  291 bits (744), Expect = 3e-90
 Identities = 137/182 (75%), Positives = 157/182 (86%)
 Frame = -1

Query: 548  LDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM 369
            LD +V NALVDMY KCG L+LA+ LF  I  KDLISWTV+IAGYGMHG G EAI AF EM
Sbjct: 540  LDRYVANALVDMYVKCGVLVLAQILFDMIPVKDLISWTVIIAGYGMHGFGREAIAAFNEM 599

Query: 368  RSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGR 189
            +  GIEP+  SFISILY+CSHSGLV EGWRFF+IM+++YKIEP LEHYACMVDLL+R G 
Sbjct: 600  KKAGIEPDSISFISILYACSHSGLVQEGWRFFDIMRNDYKIEPMLEHYACMVDLLARTGN 659

Query: 188  LTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANL 9
            LTKAYKFI +MPI+PD+++WG+LL  CRIH DVKLAEKVAEHVFELEPENTGYY+LLAN+
Sbjct: 660  LTKAYKFINMMPIEPDATVWGSLLCGCRIHHDVKLAEKVAEHVFELEPENTGYYILLANI 719

Query: 8    YA 3
            YA
Sbjct: 720  YA 721



 Score = 84.0 bits (206), Expect = 2e-15
 Identities = 45/144 (31%), Positives = 84/144 (58%)
 Frame = -1

Query: 548 LDSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM 369
           +D  + N ++DMY+KCG L  A R+F ++ ++ ++SWT MIAGY   G   +AI  F EM
Sbjct: 339 MDVMLCNNVLDMYSKCGDLSDAVRVFEKMGQRSVVSWTSMIAGYVREGLSDKAIELFCEM 398

Query: 368 RSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGR 189
              G+ P+G +  SIL++C+ SG +++G      ++ E+ ++ +L     ++D+ ++ G 
Sbjct: 399 EENGVSPDGYTITSILHACACSGSLEKGKDTHKYIR-EHGMDSSLFVCNSLMDMYAKCGS 457

Query: 188 LTKAYKFITLMPIKPDSSIWGTLL 117
           +  A    + M ++ D   W T++
Sbjct: 458 MEDADSVFSHM-LRKDIVSWNTMI 480



 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           V N+L+DMYAKCG++  A  +F  + +KD++SW  MI GY  +   +E +  F EM+ + 
Sbjct: 444 VCNSLMDMYAKCGSMEDADSVFSHMLRKDIVSWNTMIGGYSKNCLPNETLELFSEMQQK- 502

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTK 180
            +P+  +  S+L +C+    +D G      ++++ Y ++  + +   +VD+  + G L  
Sbjct: 503 FKPDSMTIASVLPACASLAALDRGQEIHGYLLRNGYFLDRYVAN--ALVDMYVKCGVLVL 560

Query: 179 AYKFITLMPIKPDSSIWGTLLRACRIH 99
           A     ++P+K D   W  ++    +H
Sbjct: 561 AQILFDMIPVK-DLISWTVIIAGYGMH 586



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D+ V N+L+  Y K   +  AR++F  +  +D+ISW  MI+ Y  +G   + +  F++M 
Sbjct: 239 DNTVVNSLMAFYFKNRRVESARKVFDELRDRDVISWNSMISAYVSNGAAEKGVEVFRQMF 298

Query: 365 SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEP--TLEHYAC--MVDLLSR 198
             GI+ + A+ I++L +CS  G +  G      + H Y I+    ++   C  ++D+ S+
Sbjct: 299 CSGIDVDLATIINVLMACSDCGDLALG-----RVVHAYAIKAGFDMDVMLCNNVLDMYSK 353

Query: 197 AGRLTKAYKFITLM 156
            G L+ A +    M
Sbjct: 354 CGDLSDAVRVFEKM 367


>ref|XP_020691186.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            [Dendrobium catenatum]
 gb|PKU81470.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 876

 Score =  290 bits (741), Expect = 9e-90
 Identities = 133/180 (73%), Positives = 158/180 (87%)
 Frame = -1

Query: 542  SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
            S V NALVDMY+KCGAL+LAR+LF  +  KD++SWTV+I+GYGMHGHG EA+  FK+MR 
Sbjct: 542  SFVMNALVDMYSKCGALVLARQLFDLMDFKDIVSWTVVISGYGMHGHGREALAIFKQMRR 601

Query: 362  EGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLT 183
             GI+P+G SF++ILY+CSHSGL+DEGWRFFN M++EYKIEPT+EHYACMVDLLSRAGRL 
Sbjct: 602  NGIKPDGVSFVAILYACSHSGLIDEGWRFFNAMRNEYKIEPTIEHYACMVDLLSRAGRLA 661

Query: 182  KAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLYA 3
            KAY FI  MP+ PD+++WG LL  CRIHRDVKLAEKVAE VFELEPENTGYY+LLAN+YA
Sbjct: 662  KAYNFIESMPMVPDATVWGALLCGCRIHRDVKLAEKVAERVFELEPENTGYYILLANIYA 721



 Score = 76.3 bits (186), Expect = 9e-13
 Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
 Frame = -1

Query: 548 LDSH--VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFK 375
           LDSH  V NAL+DMYAKCG +  AR +F   A KD+ISW  +I GY  +   +EA++ F 
Sbjct: 438 LDSHIFVANALMDMYAKCGNMENARDVFDHTADKDMISWNTLIGGYAKNSLPNEALHLFV 497

Query: 374 EMRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYA----CMVDL 207
           +M+   + PN  +   IL + +   L+++G        H Y I   ++  +     +VD+
Sbjct: 498 KMQLHML-PNSTTMACILRASASLSLLEKGREM-----HAYIIRVGIQECSFVMNALVDM 551

Query: 206 LSRAGRLTKAYKFITLMPIKPDSSIWGTLLRACRIH 99
            S+ G L  A +   LM  K D   W  ++    +H
Sbjct: 552 YSKCGALVLARQLFDLMDFK-DIVSWTVVISGYGMH 586



 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
 Frame = -1

Query: 539 HVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSE 360
           ++ N+L+DMY+KC A+  A ++F +++ + ++SWT MI+GY ++    EAI+ F+EM +E
Sbjct: 342 NLNNSLLDMYSKCLAVGNAVQIFEKMSGRTIVSWTSMISGYAINAQYEEAISLFEEMEAE 401

Query: 359 GIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYA----CMVDLLSRAG 192
            +EP+       L++C+ SG ++ G        H+Y +   L+ +      ++D+ ++ G
Sbjct: 402 NMEPDLHFITCALHACACSGSLNHGKHI-----HDYAVRNGLDSHIFVANALMDMYAKCG 456

Query: 191 RLTKAYKFITLMPIKPDSSIWGTLL 117
            +  A         K D   W TL+
Sbjct: 457 NMENARDVFDHTADK-DMISWNTLI 480


>ref|XP_013728077.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            [Brassica napus]
          Length = 870

 Score =  289 bits (740), Expect = 1e-89
 Identities = 136/181 (75%), Positives = 154/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV N+LVDMYAKCGALLLAR LF  IA KDL+SWTVMIAGYGMHG G EAI  F   R
Sbjct: 532  DRHVANSLVDMYAKCGALLLARLLFNEIASKDLVSWTVMIAGYGMHGFGKEAIALFNHKR 591

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             EGIEP+  SF+S+LY+CSHSGLVDEGWRFFNIM+HE KIEPT+EHYAC+VD+L+R G L
Sbjct: 592  REGIEPDEISFVSVLYACSHSGLVDEGWRFFNIMRHECKIEPTIEHYACVVDMLARTGDL 651

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            +KAY+FI  MPI PD++IWG LL  CRIH DVKLAE+VAE VFELEPENTGYYVL+AN+Y
Sbjct: 652  SKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAERVFELEPENTGYYVLMANIY 711

Query: 5    A 3
            A
Sbjct: 712  A 712



 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM-RSEGI 354
           N L+DMY+KCG L  A+ +F  ++ + ++S+T MIAGY   G   EA+  F EM   EGI
Sbjct: 333 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGI 392

Query: 353 EPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
            P+  +  ++L  C+ + L++EG R    I +++   +  L +   ++D+ ++ G + +A
Sbjct: 393 SPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEA 450

Query: 176 YKFITLMPIKPDSSIWGTLL 117
               + MP++ D   W T++
Sbjct: 451 EIVFSEMPVR-DIISWNTII 469



 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  ++NAL+DMYAKCG++  A  +F  +  +D+ISW  +I GY  + + +EA++ F  + 
Sbjct: 430 DIFLSNALMDMYAKCGSMGEAEIVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLL 489

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYA-CMVDLLSRA 195
            E    P+  + + +L +C+     D+G      IM++ +  +    H A  +VD+ ++ 
Sbjct: 490 EEKRFVPDERTVVCVLPACASLSAFDKGREIHGYIMRNGFFRD---RHVANSLVDMYAKC 546

Query: 194 GRLTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFE--LEPENTGYYVL 21
           G L  A      +  K D   W  ++    +H   K A  +  H     +EP+   +  +
Sbjct: 547 GALLLARLLFNEIASK-DLVSWTVMIAGYGMHGFGKEAIALFNHKRREGIEPDEISFVSV 605

Query: 20  L 18
           L
Sbjct: 606 L 606


>ref|XP_013726006.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            isoform X2 [Brassica napus]
          Length = 869

 Score =  289 bits (739), Expect = 2e-89
 Identities = 136/181 (75%), Positives = 154/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV N+LVDMYAKCGALLLAR LF  IA KDL+SWTVMIAGYGMHG G EAI  F + R
Sbjct: 531  DRHVANSLVDMYAKCGALLLARLLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFDQKR 590

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             EGIEP+  SF+S+LY+CSHSGLVDEGWRFFNIM+HE  IEPTLEHYAC+VD+L+R G L
Sbjct: 591  REGIEPDEISFVSVLYACSHSGLVDEGWRFFNIMRHECNIEPTLEHYACVVDMLARTGDL 650

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            +KAY+FI  MPI PD++IWG LL  CRIH DVKLAE+VAE VFELEPENTGYYVL+AN+Y
Sbjct: 651  SKAYRFIESMPIPPDATIWGALLCGCRIHHDVKLAERVAERVFELEPENTGYYVLMANIY 710

Query: 5    A 3
            A
Sbjct: 711  A 711



 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM-RSEGI 354
           N L+DMY+KCG L  A+ +F  ++ + ++S+T MIAGY   G   EA+  F EM   EGI
Sbjct: 332 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGI 391

Query: 353 EPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
            P+  +  ++L  C+ + L++EG R    I +++   +  L +   ++D+ ++ G + +A
Sbjct: 392 SPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEA 449

Query: 176 YKFITLMPIKPDSSIWGTLL 117
               + MP++ D   W T++
Sbjct: 450 ELVFSEMPVR-DIISWNTII 468



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  ++NAL+DMYAKCG++  A  +F  +  +D+ISW  +I GY  + + +EA++ F  + 
Sbjct: 429 DIFLSNALMDMYAKCGSMGEAELVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLL 488

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYA-CMVDLLSRA 195
            E    P+  + + +L +C+     D+G      IM++ +  +    H A  +VD+ ++ 
Sbjct: 489 EEKRFVPDERTVVCVLPACASLSAFDKGREIHGYIMRNGFFRD---RHVANSLVDMYAKC 545

Query: 194 GRLTKA 177
           G L  A
Sbjct: 546 GALLLA 551



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 34/211 (16%)
 Frame = -1

Query: 542 SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
           S V N+L+  Y K G +  AR++F  + ++D+ISW  MI GY   G   + ++ F EM  
Sbjct: 227 SSVGNSLLAFYLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLSLFVEMLC 286

Query: 362 EGIEPNGASFISILYSCSHSGLVDEGW---------------RFFNIMKHEYK------- 249
            GIE + A+ +S+   C+ S LV  G                RF N +   Y        
Sbjct: 287 SGIEFDLATVVSVFAGCADSCLVSLGRAVHGIGVKACMSREDRFCNTLLDMYSKCGDLDS 346

Query: 248 --------IEPTLEHYACMVDLLSRAGRLTKAYKFITLMP----IKPDSSIWGTLLRACR 105
                    + ++  Y  M+   +R G   +A K  + M     I PD      +L  C 
Sbjct: 347 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCA 406

Query: 104 IHRDVKLAEKVAEHVFELEPENTGYYVLLAN 12
            +R ++  ++V E + E    + G+ + L+N
Sbjct: 407 RNRLLEEGKRVHEWIKE---NDMGFDIFLSN 434


>gb|KFK28546.1| hypothetical protein AALP_AA7G010600 [Arabis alpina]
          Length = 853

 Score =  288 bits (738), Expect = 2e-89
 Identities = 134/181 (74%), Positives = 155/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D H+ N+LVDMYAKCGALLLAR LF  IA KDL+SWTVMIAGYGMHG G EAI  F +MR
Sbjct: 515  DRHIANSLVDMYAKCGALLLARMLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 574

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
              GIEP+  SF+S+LY+CSHSGLVDEGWRFFN+M+++ KIEPTLEHYAC+VD+L+R G L
Sbjct: 575  QAGIEPDEISFVSVLYACSHSGLVDEGWRFFNLMRYDCKIEPTLEHYACIVDMLARTGNL 634

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
             KAY+FI  MPI+PD++IWG LL  CRIH DVKLAEKVAE VFELEPENTGYYVL+AN+Y
Sbjct: 635  LKAYRFIENMPIQPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 694

Query: 5    A 3
            A
Sbjct: 695  A 695



 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIA-KKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEGI 354
           N L+DMY+KCG L  A+ +F  ++ ++ ++S+T +IAGY   G   EA+  F EM  EGI
Sbjct: 316 NKLLDMYSKCGDLDSAKIVFAGMSDRRSVVSYTSLIAGYAREGLAGEAVKLFAEMEEEGI 375

Query: 353 EPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLTKAY 174
            P+  S  ++L  C+ + L+DEG R    +K E  +   +     ++D+ ++ G + +A 
Sbjct: 376 SPDVYSVTAVLNCCARNRLLDEGKRVHEWIK-ENDMGFDMFVSNALMDMYAKCGSMREAE 434

Query: 173 KFITLMPIKPDSSIWGTLL 117
              + MP+K D   W T++
Sbjct: 435 LVFSEMPVK-DIYSWNTVI 452



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  V+NAL+DMYAKCG++  A  +F  +  KD+ SW  +I GY  + + +EA++ F  M 
Sbjct: 413 DMFVSNALMDMYAKCGSMREAELVFSEMPVKDIYSWNTVIGGYSKNCYANEALSLFSLML 472

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAG 192
            E  ++P+  +   +L +C+     D+G      IM++ Y  +  + +   +VD+ ++ G
Sbjct: 473 EEKRVDPDERTVACLLPACASLSAFDKGREIHGYIMRNRYFSDRHIAN--SLVDMYAKCG 530

Query: 191 RLTKAYKFITLMPIKPDSSIWGTLLRACRIH 99
            L  A      +  K D   W  ++    +H
Sbjct: 531 ALLLARMLFDEIASK-DLVSWTVMIAGYGMH 560


>ref|XP_013700306.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            [Brassica napus]
 ref|XP_013726005.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            isoform X1 [Brassica napus]
          Length = 869

 Score =  288 bits (738), Expect = 2e-89
 Identities = 136/181 (75%), Positives = 154/181 (85%)
 Frame = -1

Query: 545  DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
            D HV N+LVDMYAKCGALLLAR LF  IA KDL+SWTVMIAGYGMHG G EAI  F + R
Sbjct: 531  DRHVANSLVDMYAKCGALLLARLLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFDQKR 590

Query: 365  SEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRL 186
             EGIEP+  SF+S+LY+CSHSGLVDEGWRFFNIM+HE  IEPTLEHYAC+VD+L+R G L
Sbjct: 591  REGIEPDEISFVSVLYACSHSGLVDEGWRFFNIMRHECNIEPTLEHYACVVDMLARTGDL 650

Query: 185  TKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLY 6
            +KAY+FI  MPI PD++IWG LL  CRIH DVKLAE+VAE VFELEPENTGYYVL+AN+Y
Sbjct: 651  SKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAERVFELEPENTGYYVLMANIY 710

Query: 5    A 3
            A
Sbjct: 711  A 711



 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = -1

Query: 530 NALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEM-RSEGI 354
           N L+DMY+KCG L  A+ +F  ++ + ++S+T MIAGY   G   EA+  F EM   EGI
Sbjct: 332 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGI 391

Query: 353 EPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYACMVDLLSRAGRLTKA 177
            P+  +  ++L  C+ + L++EG R    I +++   +  L +   ++D+ ++ G + +A
Sbjct: 392 SPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEA 449

Query: 176 YKFITLMPIKPDSSIWGTLL 117
               + MP++ D   W T++
Sbjct: 450 ELVFSEMPVR-DIISWNTII 468



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
 Frame = -1

Query: 545 DSHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMR 366
           D  ++NAL+DMYAKCG++  A  +F  +  +D+ISW  +I GY  + + +EA++ F  + 
Sbjct: 429 DIFLSNALMDMYAKCGSMGEAELVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLL 488

Query: 365 SE-GIEPNGASFISILYSCSHSGLVDEGWRFFN-IMKHEYKIEPTLEHYA-CMVDLLSRA 195
            E    P+  + + +L +C+     D+G      IM++ +  +    H A  +VD+ ++ 
Sbjct: 489 EEKRFVPDERTVVCVLPACASLSAFDKGREIHGYIMRNGFFRD---RHVANSLVDMYAKC 545

Query: 194 GRLTKA 177
           G L  A
Sbjct: 546 GALLLA 551



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 34/211 (16%)
 Frame = -1

Query: 542 SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
           S V N+L+  Y K G +  AR++F  + ++D+ISW  MI GY   G   + ++ F EM  
Sbjct: 227 SSVGNSLLAFYLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLSLFVEMLC 286

Query: 362 EGIEPNGASFISILYSCSHSGLVDEGW---------------RFFNIMKHEYK------- 249
            GIE + A+ +S+   C+ S LV  G                RF N +   Y        
Sbjct: 287 SGIEFDLATVVSVFAGCADSCLVSLGRAVHGIGVKACMSREDRFCNTLLDMYSKCGDLDS 346

Query: 248 --------IEPTLEHYACMVDLLSRAGRLTKAYKFITLMP----IKPDSSIWGTLLRACR 105
                    + ++  Y  M+   +R G   +A K  + M     I PD      +L  C 
Sbjct: 347 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCA 406

Query: 104 IHRDVKLAEKVAEHVFELEPENTGYYVLLAN 12
            +R ++  ++V E + E    + G+ + L+N
Sbjct: 407 RNRLLEEGKRVHEWIKE---NDMGFDIFLSN 434


>ref|XP_020597767.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            [Phalaenopsis equestris]
          Length = 879

 Score =  288 bits (738), Expect = 3e-89
 Identities = 134/180 (74%), Positives = 158/180 (87%)
 Frame = -1

Query: 542  SHVTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRS 363
            S V NALVDMY KCGALLLAR+LF  +  +DLI+WTVMIAGYGMHGHG EA+  FK+MR 
Sbjct: 542  SFVANALVDMYVKCGALLLARQLFDLMQFRDLITWTVMIAGYGMHGHGREALQIFKQMRL 601

Query: 362  EGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYACMVDLLSRAGRLT 183
            + I+P+G SFI+ILY+CSHSGL+DEGWRFFN MK+EYKIEP +EHYACMVDLLSR+GRL+
Sbjct: 602  KRIKPDGVSFIAILYACSHSGLIDEGWRFFNAMKNEYKIEPAIEHYACMVDLLSRSGRLS 661

Query: 182  KAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAEHVFELEPENTGYYVLLANLYA 3
            KAY FI  MP++PD+++WG LL  CRIHRDV LAEKVAE+VFELEPENTGYY+LLAN+YA
Sbjct: 662  KAYMFIKSMPMEPDATVWGALLCGCRIHRDVNLAEKVAENVFELEPENTGYYILLANIYA 721



 Score = 85.1 bits (209), Expect = 8e-16
 Identities = 46/144 (31%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
 Frame = -1

Query: 536 VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFKEMRSEG 357
           ++N+L+DMY+KC A+  A ++F +++++ ++SWT MI+GY ++GH  EAI  FK+M  E 
Sbjct: 343 LSNSLLDMYSKCLAVENAVQIFEKMSERTIVSWTSMISGYTLNGHYEEAIFLFKKMEDEN 402

Query: 356 IEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYA----CMVDLLSRAGR 189
           +EP+     + L++C+ SG +++G        H+Y +   L+ +A     ++D+ ++ G 
Sbjct: 403 LEPDLHFITTALHACACSGSLNKGKHI-----HDYVVRNRLDSHAFVANALMDMYAKCGD 457

Query: 188 LTKAYKFITLMPIKPDSSIWGTLL 117
           +  A       P K D+  W TL+
Sbjct: 458 MENARIVFDHTP-KKDTISWNTLI 480



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
 Frame = -1

Query: 548 LDSH--VTNALVDMYAKCGALLLARRLFVRIAKKDLISWTVMIAGYGMHGHGSEAINAFK 375
           LDSH  V NAL+DMYAKCG +  AR +F    KKD ISW  +I GY  +   +EA++ F 
Sbjct: 438 LDSHAFVANALMDMYAKCGDMENARIVFDHTPKKDTISWNTLIGGYSKNSLPNEALHLFV 497

Query: 374 EMRSEGIEPNGASFISILYSCSHSGLVDEGWRFFNIMKHEYKIEPTLEHYA----CMVDL 207
            M    ++PN  +   IL + +    +++G        H + +   ++  +     +VD+
Sbjct: 498 TMLL-CMKPNSTTMACILRASASLSSLEKGREM-----HAHILRAGMQECSFVANALVDM 551

Query: 206 LSRAGRLTKAYKFITLMPIKPDSSIWGTLLRACRIHRDVKLAEKVAE--HVFELEPENTG 33
             + G L  A +   LM  + D   W  ++    +H   + A ++ +   +  ++P+   
Sbjct: 552 YVKCGALLLARQLFDLMQFR-DLITWTVMIAGYGMHGHGREALQIFKQMRLKRIKPDGVS 610

Query: 32  YYVLL 18
           +  +L
Sbjct: 611 FIAIL 615