BLASTX nr result

ID: Ophiopogon23_contig00031080 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00031080
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251631.1| tRNA(adenine(34)) deaminase, chloroplastic [...    86   8e-17
ref|XP_008782423.1| PREDICTED: tRNA(adenine(34)) deaminase, chlo...    71   1e-11
ref|XP_010936768.1| PREDICTED: tRNA(adenine(34)) deaminase, chlo...    71   1e-11

>ref|XP_020251631.1| tRNA(adenine(34)) deaminase, chloroplastic [Asparagus officinalis]
 gb|ONK81336.1| tRNA(adenine(34)) deaminase, chloroplastic [Asparagus officinalis]
          Length = 1240

 Score = 85.9 bits (211), Expect = 8e-17
 Identities = 64/135 (47%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 2    RSSSNESNGSEAWFSGHEPXXXXXXXXXXXXXVSPRETVLSKRPVVQSQVNVSTSMGTTK 181
            RSSSN S  SEAWF   E              VS +  + SK P      N STS  T K
Sbjct: 685  RSSSNVSTSSEAWFEPDETHDETEKEKD----VSQKAPLPSKNPTE----NASTSTSTVK 736

Query: 182  RRPLS--KSASPAEEIEWSEGGKGRRGTLSSKLTIDQSSVPTGNISSSSLTETENDQMHR 355
            R   S  KS S AEEIE  E  K R  TLSS+   +QS +PT N +SSSL E+   QM R
Sbjct: 737  RGSSSSFKSVSAAEEIELRESEKIRGDTLSSETITEQSLIPTINTASSSLCESGGFQMQR 796

Query: 356  SNSPKSEEF-GRQKQ 397
            SN+P+SEE  GRQKQ
Sbjct: 797  SNAPESEEVSGRQKQ 811


>ref|XP_008782423.1| PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Phoenix
            dactylifera]
          Length = 1393

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
 Frame = +2

Query: 2    RSSSNESNGSEAWFSGHEPXXXXXXXXXXXXXVSPRETVLSKRP---------------- 133
            R SSNES  SEAWFSG EP              +P+E + +KRP                
Sbjct: 989  RCSSNESVSSEAWFSGQEPDDNDEIDEKRSG--TPKEPLPTKRPLDESYPRTHAGPSEGS 1046

Query: 134  ---------VVQSQVNVSTSMGTTKRRPLSKSASPA---EEIEWSEGGKGRRGTLSSKLT 277
                     VV+S+   STS G TK   L+K +S     EE+ W+EG KGR G  S+ +T
Sbjct: 1047 FGVPQLGDRVVKSEAGTSTSTGITKTGSLAKGSSTVSIPEEVGWTEGEKGREGIPSNVIT 1106

Query: 278  IDQSSVPTGNISSSSLTETENDQMHRSNSP 367
            +DQSS  T + + + +   E D+ +  N P
Sbjct: 1107 VDQSSALTDDTAPAII---EEDKTNIGNVP 1133


>ref|XP_010936768.1| PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Elaeis
            guineensis]
          Length = 1400

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 28/138 (20%)
 Frame = +2

Query: 2    RSSSNESNGSEAWFSGHEPXXXXXXXXXXXXXVSPRETVLSKRP---------------- 133
            RSSSNES  SEAWFSG EP              +P+E++L KRP                
Sbjct: 992  RSSSNESVSSEAWFSGQEPDDNDEIDVKGRSG-TPKESLLIKRPVDESYGRMHAGPSQGS 1050

Query: 134  ---------VVQSQVNVSTSMGTTKRRPLSKSASPA---EEIEWSEGGKGRRGTLSSKLT 277
                     VV+S    STSMG TK   L+K +S     +E+ W+EG KG  G  S+ + 
Sbjct: 1051 SEVPKLGDRVVKSDAGASTSMGMTKTSSLAKGSSTVSRPQEVGWTEGEKGGEGIPSNVIM 1110

Query: 278  IDQSSVPTGNISSSSLTE 331
            +DQSS  T + +++ + E
Sbjct: 1111 VDQSSALTDDTAAAIIEE 1128


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