BLASTX nr result

ID: Ophiopogon23_contig00030301 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00030301
         (683 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009421240.1| PREDICTED: uncharacterized protein LOC104000...    57   6e-06

>ref|XP_009421240.1| PREDICTED: uncharacterized protein LOC104000826 [Musa acuminata
           subsp. malaccensis]
          Length = 258

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = +3

Query: 33  RKTGRVPIRLDCPPVSLKQVKDAGLLPKCDIYLFRWINIR 152
           + TG+VPIR+ C PVSLKQ    G LPKC  Y  RWIN+R
Sbjct: 219 KNTGKVPIRVGCDPVSLKQGVSGGTLPKCRFYFLRWINLR 258


Top