BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00030218
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK56205.1| uncharacterized protein A4U43_C10F5210 [Asparagus...    71   1e-12
ref|XP_020248227.1| pre-mRNA-splicing factor cwc24-like [Asparag...    68   2e-11
gb|KMZ75569.1| RING/U-box superfamily protein [Zostera marina]         59   2e-07
ref|XP_020089210.1| LOW QUALITY PROTEIN: putative E3 ubiquitin-p...    56   2e-06
gb|OAY67857.1| hypothetical protein ACMD2_26255, partial [Ananas...    55   6e-06
gb|PON70820.1| RING/U-box superfamily protein [Parasponia anders...    54   8e-06
gb|PON70817.1| RING/U-box superfamily protein [Parasponia anders...    54   8e-06

>gb|ONK56205.1| uncharacterized protein A4U43_C10F5210 [Asparagus officinalis]
          Length = 183

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 44/75 (58%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
 Frame = +2

Query: 26  EEQKM--SGSGSGSIRNPANGTISWKSFKDRIRLRRTSAAWSEPDPGPELEIGPPSSAPL 199
           +EQKM  SGS SGSIR+  NGT++WKSFKDRIRLRR   AWSE    PE E  PP   P 
Sbjct: 7   QEQKMNESGSKSGSIRDSDNGTVNWKSFKDRIRLRRAGNAWSE----PESEYYPP---PN 59

Query: 200 P-PNFARSLTVRGSD 241
           P P FARS + + +D
Sbjct: 60  PNPLFARSFSGKPAD 74


>ref|XP_020248227.1| pre-mRNA-splicing factor cwc24-like [Asparagus officinalis]
          Length = 173

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = +2

Query: 41  SGSGSGSIRNPANGTISWKSFKDRIRLRRTSAAWSEPDPGPELEIGPPSSAPLP-PNFAR 217
           SGS SGSIR+  NGT++WKSFKDRIRLRR   AWSE    PE E  PP   P P P FAR
Sbjct: 4   SGSKSGSIRDSDNGTVNWKSFKDRIRLRRAGNAWSE----PESEYYPP---PNPNPLFAR 56

Query: 218 SLTVRGSD 241
           S + + +D
Sbjct: 57  SFSGKPAD 64


>gb|KMZ75569.1| RING/U-box superfamily protein [Zostera marina]
          Length = 316

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
 Frame = +2

Query: 2   RSLMDIIREEQKMSGSGSGS-----IRNPANGTISWKSFKDRIRLRRTSAAWSEPDPGPE 166
           R+L+D+IR+E   SGSGSGS     +RN  N  I WKSFK+R+RLRRT A  +       
Sbjct: 96  RTLLDVIRDEGG-SGSGSGSGTSLAVRNGNNNRIFWKSFKNRLRLRRTVAGTASVSSTST 154

Query: 167 LEIGPPSSAPLPPNFARSLTVRGSDNVSAPGPVDSEDDDQPNSNLNV 307
                P S P+P N   ++ +  +  V++    ++ +   P S + V
Sbjct: 155 TVASSPVSLPIPQN---AVAITTATTVTSRRQTETVEGQSPASPIRV 198


>ref|XP_020089210.1| LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase XBAT35
           [Ananas comosus]
          Length = 338

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
 Frame = +2

Query: 2   RSLMDIIREEQKMSG----------SGSGSIRNPANGTISWKSFKDRIRLRRTSAA---- 139
           R+L+DIIREEQ  +           +G+G+     NG I+W+SFKDR+R+ RT AA    
Sbjct: 81  RTLLDIIREEQGGASPADADAVEGDAGAGAGAGAGNG-INWRSFKDRLRIGRTGAAAFAS 139

Query: 140 ------WSEPDPGPELEIGPPSSAPLPPNFARSLTVR----GSDNVSAPGPVDSEDDDQP 289
                  S+P+  P L   P  S      F RSL++R     +   SAPG       ++P
Sbjct: 140 SATAAPISDPELVPSLRANPNPSPGPGLGFPRSLSIRPFSAAAQEPSAPG------GEEP 193

Query: 290 NSNLNVGGGGNDPGKTSL 343
           +++  VG   N P  T+L
Sbjct: 194 DADSPVGAPAN-PSSTAL 210


>gb|OAY67857.1| hypothetical protein ACMD2_26255, partial [Ananas comosus]
          Length = 333

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
 Frame = +2

Query: 2   RSLMDIIREEQKMSGSG--------SGSIRNPANGTISWKSFKDRIRLRRTSAA------ 139
           R+L+DIIREEQ  + +         +G+     NG I+W+SFKDR+R+ RT AA      
Sbjct: 84  RTLLDIIREEQGGASAADADTVEGDAGAGAGAGNG-INWRSFKDRLRIGRTGAAAFASSA 142

Query: 140 ----WSEPDPGPELEIGPPSSAPLPPNFARSLTVR----GSDNVSAPGPVDSEDDDQPNS 295
                S+P+  P L   P  S      F RSL++R     +   SAPG       ++P++
Sbjct: 143 TAAPISDPELVPSLRANPNPSPGPGLGFPRSLSIRPFSAAAQEPSAPG------GEEPDA 196

Query: 296 NLNVGGGGNDPGKTSL 343
           +  VG   N P  T+L
Sbjct: 197 DSPVGAPAN-PSSTAL 211


>gb|PON70820.1| RING/U-box superfamily protein [Parasponia andersonii]
          Length = 355

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   RSLMDIIREEQKMSGSGSGSIRNPANGTISWKSFKDRIRLRR--TSAAWSEPDPGPELEI 175
           R+L+DIIR+E   SGS  G I    +   SWKSFKDR+RL+R  + AAW+     P  +I
Sbjct: 77  RTLLDIIRDEDPKSGSCKGFIATNKDKK-SWKSFKDRLRLKRSGSGAAWTSSVHTPTSDI 135

Query: 176 GPPSSAPLPPNFARSLTVRGSDNVSAPGPVDSEDDDQPNSNLNVGGGG 319
             P+S         +  VR     +A    D    D  +S  N G GG
Sbjct: 136 LVPTSRSQISR--HNSAVRNLAEPAAEAAHDMAHPDDASSESNGGSGG 181


>gb|PON70817.1| RING/U-box superfamily protein [Parasponia andersonii]
          Length = 369

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   RSLMDIIREEQKMSGSGSGSIRNPANGTISWKSFKDRIRLRR--TSAAWSEPDPGPELEI 175
           R+L+DIIR+E   SGS  G I    +   SWKSFKDR+RL+R  + AAW+     P  +I
Sbjct: 77  RTLLDIIRDEDPKSGSCKGFIATNKDKK-SWKSFKDRLRLKRSGSGAAWTSSVHTPTSDI 135

Query: 176 GPPSSAPLPPNFARSLTVRGSDNVSAPGPVDSEDDDQPNSNLNVGGGG 319
             P+S         +  VR     +A    D    D  +S  N G GG
Sbjct: 136 LVPTSRSQISR--HNSAVRNLAEPAAEAAHDMAHPDDASSESNGGSGG 181