BLASTX nr result

ID: Ophiopogon23_contig00030040 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00030040
         (624 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254850.1| DNA mismatch repair protein PMS1 isoform X1 ...    76   2e-12
gb|ABK92950.1| unknown [Populus trichocarpa]                           64   3e-10
ref|XP_019703895.1| PREDICTED: DNA mismatch repair protein PMS1 ...    69   4e-10
ref|XP_010914435.1| PREDICTED: DNA mismatch repair protein PMS1 ...    69   4e-10
ref|XP_010914439.1| PREDICTED: DNA mismatch repair protein PMS1 ...    69   7e-10
ref|XP_010914440.1| PREDICTED: DNA mismatch repair protein PMS1 ...    68   1e-09
gb|KMZ57623.1| hypothetical protein ZOSMA_84G00620 [Zostera marina]    62   4e-09
ref|XP_017701079.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    66   6e-09
gb|PKI62807.1| hypothetical protein CRG98_016758, partial [Punic...    62   1e-08
ref|XP_011033556.1| PREDICTED: DNA mismatch repair protein PMS1 ...    64   2e-08
ref|XP_011033555.1| PREDICTED: DNA mismatch repair protein PMS1 ...    64   2e-08
ref|XP_002321013.1| DNA mismatch repair family protein [Populus ...    64   2e-08
ref|XP_020101043.1| DNA mismatch repair protein PMS1 isoform X4 ...    64   3e-08
ref|XP_020101042.1| DNA mismatch repair protein PMS1 isoform X3 ...    64   3e-08
ref|XP_020101041.1| DNA mismatch repair protein PMS1 isoform X2 ...    64   3e-08
ref|XP_020101040.1| DNA mismatch repair protein PMS1 isoform X1 ...    64   3e-08
gb|OMO81886.1| DNA mismatch repair protein [Corchorus olitorius]       64   4e-08
ref|XP_016494999.1| PREDICTED: DNA mismatch repair protein PMS1-...    59   6e-08
ref|XP_023899108.1| DNA mismatch repair protein PMS1-like [Querc...    60   7e-08
gb|OWM63536.1| hypothetical protein CDL15_Pgr019486 [Punica gran...    62   9e-08

>ref|XP_020254850.1| DNA mismatch repair protein PMS1 isoform X1 [Asparagus officinalis]
 gb|ONK78666.1| uncharacterized protein A4U43_C02F21180 [Asparagus officinalis]
          Length = 906

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGR 515
           QNILHNLAGLKSPWNCPHGRPTMRHL DLS+ Q+GR
Sbjct: 867 QNILHNLAGLKSPWNCPHGRPTMRHLVDLSTFQNGR 902


>gb|ABK92950.1| unknown [Populus trichocarpa]
          Length = 79

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPDEVEASL 479
           Q IL +L  LKSPWNCPHGRPTMRHL D+SS+ +      PDE EA L
Sbjct: 37  QKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYE-----RPDETEAGL 79


>ref|XP_019703895.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X4 [Elaeis
           guineensis]
          Length = 906

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGA 503
           Q ILHNLA LKSPWNCPHGRPTMRHLADL S+ + R V A
Sbjct: 845 QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNARLVFA 884


>ref|XP_010914435.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
            guineensis]
 ref|XP_010914436.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
            guineensis]
 ref|XP_010914437.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
            guineensis]
 ref|XP_019703893.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
            guineensis]
 ref|XP_019703894.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
            guineensis]
          Length = 944

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = -3

Query: 622  QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGA 503
            Q ILHNLA LKSPWNCPHGRPTMRHLADL S+ + R V A
Sbjct: 883  QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNARLVFA 922


>ref|XP_010914439.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Elaeis
            guineensis]
          Length = 932

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = -3

Query: 622  QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPD 497
            Q ILHNLA LKSPWNCPHGRPTMRHLADL S+ + R    P+
Sbjct: 883  QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNARMNRGPN 924


>ref|XP_010914440.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X3 [Elaeis
           guineensis]
          Length = 922

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGR 515
           Q ILHNLA LKSPWNCPHGRPTMRHLADL S+ + R
Sbjct: 883 QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNAR 918


>gb|KMZ57623.1| hypothetical protein ZOSMA_84G00620 [Zostera marina]
          Length = 84

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           + IL NL GLKSPWNCPHGRPTMRHLADL++++
Sbjct: 43  KKILGNLTGLKSPWNCPHGRPTMRHLADLTTMR 75


>ref|XP_017701079.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein PMS1
           [Phoenix dactylifera]
          Length = 923

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGR 515
           Q ILH+LA LKSPWNCPHGRPTMRHLADL S+ + R
Sbjct: 880 QRILHDLADLKSPWNCPHGRPTMRHLADLISIHNAR 915


>gb|PKI62807.1| hypothetical protein CRG98_016758, partial [Punica granatum]
          Length = 157

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           Q IL +LA LKSPWNCPHGRPTMRHL DLSSL+
Sbjct: 116 QKILEHLADLKSPWNCPHGRPTMRHLVDLSSLR 148


>ref|XP_011033556.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Populus
           euphratica]
          Length = 826

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPDEVEASL 479
           Q IL +L  LKSPWNCPHGRPTMRHL D+SS+ +      PDE EA L
Sbjct: 784 QKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYE-----RPDETEAGL 826


>ref|XP_011033555.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Populus
            euphratica]
          Length = 915

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = -3

Query: 622  QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPDEVEASL 479
            Q IL +L  LKSPWNCPHGRPTMRHL D+SS+ +      PDE EA L
Sbjct: 873  QKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYE-----RPDETEAGL 915


>ref|XP_002321013.1| DNA mismatch repair family protein [Populus trichocarpa]
 gb|PNT04568.1| hypothetical protein POPTR_014G130800v3 [Populus trichocarpa]
          Length = 915

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = -3

Query: 622  QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPDEVEASL 479
            Q IL +L  LKSPWNCPHGRPTMRHL D+SS+ +      PDE EA L
Sbjct: 873  QKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYE-----RPDETEAGL 915


>ref|XP_020101043.1| DNA mismatch repair protein PMS1 isoform X4 [Ananas comosus]
          Length = 759

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           Q IL+NL GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 723 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 755


>ref|XP_020101042.1| DNA mismatch repair protein PMS1 isoform X3 [Ananas comosus]
          Length = 779

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           Q IL+NL GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 743 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 775


>ref|XP_020101041.1| DNA mismatch repair protein PMS1 isoform X2 [Ananas comosus]
          Length = 901

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           Q IL+NL GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 865 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 897


>ref|XP_020101040.1| DNA mismatch repair protein PMS1 isoform X1 [Ananas comosus]
          Length = 902

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           Q IL+NL GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 866 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 898


>gb|OMO81886.1| DNA mismatch repair protein [Corchorus olitorius]
          Length = 971

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = -3

Query: 622  QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPDEVEAS 482
            Q IL +LA LKSPWNCPHGRPTMRHL DL++L  G     PDE + S
Sbjct: 929  QKILEHLADLKSPWNCPHGRPTMRHLVDLATLSKG-----PDEGDTS 970


>ref|XP_016494999.1| PREDICTED: DNA mismatch repair protein PMS1-like [Nicotiana
           tabacum]
          Length = 87

 Score = 58.5 bits (140), Expect = 6e-08
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQDGRYVGAPDEVEASL 479
           Q IL NL+ LKSPWNCPHGRPTMRHL DL ++   R + A DE E +L
Sbjct: 43  QKILENLSRLKSPWNCPHGRPTMRHLVDLRTVH--RRIEA-DENETAL 87


>ref|XP_023899108.1| DNA mismatch repair protein PMS1-like [Quercus suber]
          Length = 143

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSL 527
           Q IL +LA LKSPWNCPHGRPTMRHL DL+S+
Sbjct: 101 QKILKHLADLKSPWNCPHGRPTMRHLTDLTSI 132


>gb|OWM63536.1| hypothetical protein CDL15_Pgr019486 [Punica granatum]
          Length = 920

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -3

Query: 622 QNILHNLAGLKSPWNCPHGRPTMRHLADLSSLQ 524
           Q IL +LA LKSPWNCPHGRPTMRHL DLSSL+
Sbjct: 879 QKILEHLADLKSPWNCPHGRPTMRHLVDLSSLR 911


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