BLASTX nr result

ID: Ophiopogon23_contig00028874 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028874
         (803 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010906056.1| PREDICTED: 60S acidic ribosomal protein P1 [...    57   1e-06
ref|XP_010917974.1| PREDICTED: 60S acidic ribosomal protein P1 [...    56   2e-06
ref|XP_008800672.1| PREDICTED: 60S acidic ribosomal protein P1-l...    56   2e-06
ref|XP_008811869.1| PREDICTED: 60S acidic ribosomal protein P1-l...    56   2e-06
ref|XP_009415882.1| PREDICTED: 60S acidic ribosomal protein P1 [...    55   4e-06
ref|XP_010940836.1| PREDICTED: 60S acidic ribosomal protein P1 i...    55   6e-06

>ref|XP_010906056.1| PREDICTED: 60S acidic ribosomal protein P1 [Elaeis guineensis]
 ref|XP_010906057.1| PREDICTED: 60S acidic ribosomal protein P1 [Elaeis guineensis]
          Length = 113

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -1

Query: 113 HVKIESYWAPLFAKLLEKKSVDDLIAGIGSGQADLP 6
           ++KI+SYWAPLFAKLLEK+SVDDLI  +GSG    P
Sbjct: 35  NLKIDSYWAPLFAKLLEKRSVDDLILSVGSGGGSAP 70


>ref|XP_010917974.1| PREDICTED: 60S acidic ribosomal protein P1 [Elaeis guineensis]
 ref|XP_010917975.1| PREDICTED: 60S acidic ribosomal protein P1 [Elaeis guineensis]
          Length = 113

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -1

Query: 113 HVKIESYWAPLFAKLLEKKSVDDLIAGIGSGQADLP 6
           ++KI+SYWAPLFAKLLEK+SVDDLI  +GSG    P
Sbjct: 35  NLKIDSYWAPLFAKLLEKRSVDDLILSVGSGGGGAP 70


>ref|XP_008800672.1| PREDICTED: 60S acidic ribosomal protein P1-like [Phoenix
           dactylifera]
 ref|XP_008800673.1| PREDICTED: 60S acidic ribosomal protein P1-like [Phoenix
           dactylifera]
          Length = 110

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -1

Query: 113 HVKIESYWAPLFAKLLEKKSVDDLIAGIGSGQADLP 6
           ++KI+SYWAPLFAKLLEK+SVDDLI  +GSG    P
Sbjct: 35  NLKIDSYWAPLFAKLLEKRSVDDLILSVGSGGGGSP 70


>ref|XP_008811869.1| PREDICTED: 60S acidic ribosomal protein P1-like [Phoenix
           dactylifera]
          Length = 112

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -1

Query: 110 VKIESYWAPLFAKLLEKKSVDDLIAGIGSGQADLP 6
           +KI+SYWAPLFAKLLEK+SVDDLI  +GSG    P
Sbjct: 36  LKIDSYWAPLFAKLLEKRSVDDLILSVGSGGGGAP 70


>ref|XP_009415882.1| PREDICTED: 60S acidic ribosomal protein P1 [Musa acuminata subsp.
           malaccensis]
          Length = 116

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -1

Query: 113 HVKIESYWAPLFAKLLEKKSVDDLIAGIGSGQADLP 6
           +V I+SYWAPLFAKLLEK+SVDDLI  +GSG    P
Sbjct: 38  NVTIDSYWAPLFAKLLEKRSVDDLILSVGSGGGGAP 73


>ref|XP_010940836.1| PREDICTED: 60S acidic ribosomal protein P1 isoform X2 [Elaeis
           guineensis]
          Length = 113

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -1

Query: 113 HVKIESYWAPLFAKLLEKKSVDDLIAGIGSG 21
           +VKI+SYWAPLFAKLLEK+SV+DLI  +GSG
Sbjct: 35  NVKIDSYWAPLFAKLLEKRSVEDLILSVGSG 65


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