BLASTX nr result

ID: Ophiopogon23_contig00028826 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028826
         (490 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY66022.1| UPF0396 protein [Ananas comosus]                        57   2e-06
ref|XP_020080655.1| NF-kappa-B-activating protein-like [Ananas c...    56   5e-06
gb|OAY66018.1| UPF0396 protein [Ananas comosus]                        56   5e-06

>gb|OAY66022.1| UPF0396 protein [Ananas comosus]
          Length = 486

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 48/150 (32%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
 Frame = -1

Query: 442 TRLASTIEYSDRHRSRYRASPDPYADGXXXXXXXXXXXXXXRYGRDGHRSRVSPP----- 278
           +RLAST+E  +R R     SP P AD                  R   RS   PP     
Sbjct: 11  SRLASTVEIPERSRVSRSPSPLPDADDDDRRRGP----------RRNPRSETPPPRRRSR 60

Query: 277 -----------PYHDXXXXXXXXXXXNKPWXXXXXXXXXXXE--LKGLTYFEYXXXXXXX 137
                      PYHD            KP+           +  LKGL+YFEY       
Sbjct: 61  SPYQDRRRQWSPYHDRPSRNG------KPYGSRDDDDSEEDDEELKGLSYFEYRRLKRQK 114

Query: 136 XXXXXKNCIWRVTPSPPRTDRDQSDDEEPP 47
                KNCIW VTPSPPR++R+QS+  + P
Sbjct: 115 LRKKLKNCIWTVTPSPPRSEREQSELFDEP 144


>ref|XP_020080655.1| NF-kappa-B-activating protein-like [Ananas comosus]
          Length = 486

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 47/150 (31%), Positives = 58/150 (38%), Gaps = 18/150 (12%)
 Frame = -1

Query: 442 TRLASTIEYSDRHRSRYRASPDPYADGXXXXXXXXXXXXXXRYGRDGHRSRVSPP----- 278
           +RLAST+E  +R R     SP P AD                  R   RS   PP     
Sbjct: 11  SRLASTVEIPERSRVSRSPSPLPDADDDDRRRGP----------RRNPRSETPPPRRRSS 60

Query: 277 -----------PYHDXXXXXXXXXXXNKPWXXXXXXXXXXXE--LKGLTYFEYXXXXXXX 137
                      PYHD            KP+           +  LKGL+YFEY       
Sbjct: 61  SPYQDRRRRWSPYHDRPSRNG------KPYGSRDDDDSEEDDEELKGLSYFEYRRLKRQK 114

Query: 136 XXXXXKNCIWRVTPSPPRTDRDQSDDEEPP 47
                KNCIW  TPSPPR++R+QS+  + P
Sbjct: 115 LRKKLKNCIWTATPSPPRSEREQSELFDEP 144


>gb|OAY66018.1| UPF0396 protein [Ananas comosus]
          Length = 488

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 47/150 (31%), Positives = 57/150 (38%), Gaps = 18/150 (12%)
 Frame = -1

Query: 442 TRLASTIEYSDRHRSRYRASPDPYADGXXXXXXXXXXXXXXRYGRDGHRSRVSPP----- 278
           +RLAST+E  +R R     SP P AD                  R   RS   PP     
Sbjct: 11  SRLASTVEIPERSRVSPSPSPLPDADDDDRRRGP----------RRNPRSETPPPRRRSR 60

Query: 277 -----------PYHDXXXXXXXXXXXNKPWXXXXXXXXXXXE--LKGLTYFEYXXXXXXX 137
                      PYHD            KP+           +  LKGL+YFEY       
Sbjct: 61  SPYQDRRRRWSPYHDRPSRNG------KPYGSRDDDDSDEDDEELKGLSYFEYRRLKRQK 114

Query: 136 XXXXXKNCIWRVTPSPPRTDRDQSDDEEPP 47
                KNCIW  TPSPPR++R+QS+    P
Sbjct: 115 LRKKLKNCIWTATPSPPRSEREQSEPFNEP 144


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