BLASTX nr result

ID: Ophiopogon23_contig00028802 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028802
         (679 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY09782.1| Zinc finger (MYND type) family protein / programm...    58   4e-06

>gb|EOY09782.1| Zinc finger (MYND type) family protein / programmed cell death 2
           C-terminal domain-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 457

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = -2

Query: 678 RVFRIQLPRSNPFYSYEPPKGNGSDKPLTAGGHYQALVKKKVPTIKLEDFLPHSVDSTTR 499
           +VFR QLPR+N FYS EPPKGN +DKPLT GG      +  V  IK+E     ++ S   
Sbjct: 150 KVFRCQLPRANTFYSNEPPKGNATDKPLTPGG------RAMVELIKMERLYATAMSSLAA 203

Query: 498 G 496
           G
Sbjct: 204 G 204