BLASTX nr result

ID: Ophiopogon23_contig00028727 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028727
         (485 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020245954.1| mediator-associated protein 2 [Asparagus off...    88   2e-18

>ref|XP_020245954.1| mediator-associated protein 2 [Asparagus officinalis]
 gb|ONK58635.1| uncharacterized protein A4U43_C09F15080 [Asparagus officinalis]
          Length = 219

 Score = 88.2 bits (217), Expect = 2e-18
 Identities = 49/97 (50%), Positives = 63/97 (64%)
 Frame = +3

Query: 3   FSNLNQSSQRGSERSLSHRSTVLRGTEGTSRDTFAFGHSTDMETPKPSKKKKRTDXXXXX 182
           FSN  +S+ RGS RS SHRSTVL+G++GT+ DTF F HST+ ETP+PS+KK+R +     
Sbjct: 124 FSNATRSNLRGSGRSSSHRSTVLKGSKGTA-DTFNFPHSTE-ETPQPSRKKRREEHRSGD 181

Query: 183 XXXXXXXPVSHVTDT*AARERYHGDKPMKKKNKTVDE 293
                  P SH+TD   A +R HGD+  KK  K  DE
Sbjct: 182 GSSRGSRPDSHLTDGSLASDRSHGDQSKKKNKKIKDE 218


Top