BLASTX nr result

ID: Ophiopogon23_contig00028682 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028682
         (629 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008803164.1| PREDICTED: coiled-coil domain-containing pro...    65   6e-09
ref|XP_010942888.1| PREDICTED: coiled-coil domain-containing pro...    64   1e-08
ref|XP_008803161.1| PREDICTED: coiled-coil domain-containing pro...    59   8e-07

>ref|XP_008803164.1| PREDICTED: coiled-coil domain-containing protein 94-like [Phoenix
           dactylifera]
          Length = 342

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   SSKNGETRVG-YSIPKPKFILKPRSATNGPPNKKLAIESTVNNQPKSEEESESDLTGRSK 178
           SSK+G T  G  S+  PKFILKPR  T+GP +KK       +++    ++ E++ T  ++
Sbjct: 268 SSKDGGTSGGGSSVTMPKFILKPRPVTDGPSSKKPRTAPIEDDR----QDGENNQTEGNQ 323

Query: 179 MSNGLVSLFQNYDGDDESD 235
           M+NGLVSL QNYD DDESD
Sbjct: 324 MTNGLVSLCQNYDTDDESD 342


>ref|XP_010942888.1| PREDICTED: coiled-coil domain-containing protein 94 [Elaeis
           guineensis]
          Length = 343

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = +2

Query: 2   SSKNGETRVGYSIPKPKFILKPRSATNGPPNKKLAIESTVNNQPKSEEESESDLTGRSKM 181
           SSK+G T  G S+  PKFILKPR  T+G P+KK       ++Q +  ++ E++ T  ++M
Sbjct: 268 SSKDGATPGGSSVAMPKFILKPRPVTDG-PSKKPRPSPMEDDQSRDRQDDENNQTEGNQM 326

Query: 182 SNGLVSLFQNYDGDDESD 235
            NGL SL QNYD  DESD
Sbjct: 327 MNGLASLCQNYD-TDESD 343


>ref|XP_008803161.1| PREDICTED: coiled-coil domain-containing protein 94-like isoform X1
           [Phoenix dactylifera]
          Length = 342

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   SSKNGETRVG-YSIPKPKFILKPRSATNGPPNKKLAIESTVNNQPKSEEESESDLTGRSK 178
           SSK+G T  G  S+  PKFILKPR   +GP +K+       +++    ++ E++ T  ++
Sbjct: 268 SSKDGGTSGGGSSVTMPKFILKPRPVADGPSSKRPRTAPIEDDR----QDGENNQTEGNQ 323

Query: 179 MSNGLVSLFQNYDGDDESD 235
           M+N LVSL QNYD DDESD
Sbjct: 324 MTNWLVSLCQNYDTDDESD 342


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