BLASTX nr result

ID: Ophiopogon23_contig00028654 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028654
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008782069.1| PREDICTED: RING-H2 finger protein ATL56-like...    58   3e-07
ref|XP_010913606.1| PREDICTED: RING-H2 finger protein ATL56-like...    57   7e-07

>ref|XP_008782069.1| PREDICTED: RING-H2 finger protein ATL56-like [Phoenix dactylifera]
          Length = 185

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 34/35 (97%)
 Frame = -3

Query: 421 HRSMSKPQGGARILSFLLQALVMAVALSLFFLFAG 317
           H++ +KP+GGAR+LSF+LQA+VMAVAL+LFFLFAG
Sbjct: 21  HQAPAKPKGGARVLSFVLQAIVMAVALALFFLFAG 55


>ref|XP_010913606.1| PREDICTED: RING-H2 finger protein ATL56-like [Elaeis guineensis]
 ref|XP_010913607.1| PREDICTED: RING-H2 finger protein ATL56-like [Elaeis guineensis]
          Length = 187

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 26/35 (74%), Positives = 33/35 (94%)
 Frame = -3

Query: 421 HRSMSKPQGGARILSFLLQALVMAVALSLFFLFAG 317
           H+  +KP+GGAR+LSF+LQA+VMAVAL+LFFLFAG
Sbjct: 21  HQPPAKPKGGARVLSFVLQAVVMAVALALFFLFAG 55


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