BLASTX nr result

ID: Ophiopogon23_contig00028569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028569
         (600 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001315901.1| heavy neurofilament protein [Trichomonas vag...    59   1e-06

>ref|XP_001315901.1| heavy neurofilament protein [Trichomonas vaginalis G3]
 gb|EAY03678.1| heavy neurofilament protein, putative [Trichomonas vaginalis G3]
          Length = 1991

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
 Frame = +1

Query: 22   DESCEANSSIKELEKPEQPPKLDV--IVNSQISKDENPEICVLVKESEKLEEQKLPVNDF 195
            D+  E     +E +KPE+PPKL    +V + +  +E PE   +  E    EE+K   +  
Sbjct: 812  DDEKEEEKPKEEEKKPEEPPKLGFRDLVTNNLKPEEKPEEKEIKVEEPPKEEEKKKSSSS 871

Query: 196  ENSTISKDESVEVNAPAKESEKP--EQPNL---NVIENNTISKDENCQMDTPKVSEESHK 360
             +S+ S DE      P +E EKP  E P L   +++ NN   +++  +   P  S +S  
Sbjct: 872  SSSSSSDDEK-----PKEEEEKPVEEPPKLGFRDLVTNNLKPEEKPEEKSVPPPSFDSSS 926

Query: 361  SDAVIIENGTILKDEPHKTEVTVIVHENPSTSKSTNGDNSSVRSLPRSPPNSPTKVAVR 537
               + IE+     DEP K E      ++ S+S S++ D+   +     P   P K+  R
Sbjct: 927  DQDIEIESE---HDEPPKEEEK---KKSSSSSSSSSSDDEKPKEEEEKPVEEPPKLGFR 979


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