BLASTX nr result

ID: Ophiopogon23_contig00028202 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028202
         (363 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256882.1| uncharacterized protein C18orf8 [Asparagus o...    74   6e-13
ref|XP_009408669.1| PREDICTED: uncharacterized protein C18orf8 h...    59   1e-07

>ref|XP_020256882.1| uncharacterized protein C18orf8 [Asparagus officinalis]
 ref|XP_020256883.1| uncharacterized protein C18orf8 [Asparagus officinalis]
 gb|ONK75056.1| uncharacterized protein A4U43_C03F12860 [Asparagus officinalis]
          Length = 722

 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 57/130 (43%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
 Frame = -1

Query: 363 VKLGNAAAGGDRRASEKSQNSDIQHAVSSEEPASDMGNREKSVAQVYTSDSQKSIERNME 184
           VKLGNA  GGDRRASEKSQ S +QH +SS      +    KSVAQ               
Sbjct: 424 VKLGNALGGGDRRASEKSQYSGVQHTISS----GALPQEAKSVAQ--------------- 464

Query: 183 SETFGNASTSAAIKASLPSGSNFDRDADLENLRREKSLSGDSQD---------MGGQTSG 31
                              GS FD DA+LE  R EKSLSGD QD         M GQTSG
Sbjct: 465 -------------------GSKFDGDANLE--RHEKSLSGDIQDIQDREAINNMKGQTSG 503

Query: 30  VNMEQSPLES 1
           VN+ QS +ES
Sbjct: 504 VNLGQSLMES 513


>ref|XP_009408669.1| PREDICTED: uncharacterized protein C18orf8 homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_009408683.2| PREDICTED: uncharacterized protein C18orf8 homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_018685332.1| PREDICTED: uncharacterized protein C18orf8 homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_018685334.1| PREDICTED: uncharacterized protein C18orf8 homolog [Musa acuminata
           subsp. malaccensis]
          Length = 770

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
 Frame = -1

Query: 363 VKLGNAAAGGDRRASEKSQNSDIQHA----VSSEEPASDMGNREKSVAQVYTSDSQKSIE 196
           VK+ NA  GGDR +S+KSQNS  Q A    + S E   +  NR KS+ +   S++Q+S  
Sbjct: 426 VKMENAFQGGDR-SSKKSQNSGSQSANTSNIVSAESLDETMNRGKSIIKGAESETQQSTI 484

Query: 195 RNMESETFGNASTSAAIKASLPSGSNFDRDADLENLRR------EKSLSGD------SQD 52
           RN+ +    +A  S + KASL S S+ D DA+L+ +R       +K LS D       QD
Sbjct: 485 RNLVNVNDNHAKKSTS-KASLDSVSDSDGDANLDAMRSNSGESLDKYLSTDLLSSDAMQD 543

Query: 51  MGGQTSGVNMEQSPLES 1
           +        ++QSP+ES
Sbjct: 544 VKKNMKHDYLKQSPIES 560


Top