BLASTX nr result
ID: Ophiopogon23_contig00027925
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00027925
(506 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II tra... 65 3e-09
ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II tra... 65 3e-09
ref|XP_020585458.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 65 4e-09
gb|ONK67984.1| uncharacterized protein A4U43_C05F5910 [Asparagus... 61 1e-08
ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II tra... 63 3e-08
ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II tra... 62 5e-08
gb|POF07329.1| mediator of rna polymerase ii transcription subun... 61 1e-07
ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 61 1e-07
gb|POE87032.1| mediator of rna polymerase ii transcription subun... 61 1e-07
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_023871507.1| mediator of RNA polymerase II transcription ... 61 1e-07
ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_010278916.1| PREDICTED: mediator of RNA polymerase II tra... 60 2e-07
ref|XP_008244324.1| PREDICTED: mediator of RNA polymerase II tra... 60 2e-07
ref|XP_021685771.1| mediator of RNA polymerase II transcription ... 60 3e-07
ref|XP_021685770.1| mediator of RNA polymerase II transcription ... 60 3e-07
ref|XP_021685769.1| mediator of RNA polymerase II transcription ... 60 3e-07
ref|XP_021685768.1| mediator of RNA polymerase II transcription ... 60 3e-07
>ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Phoenix dactylifera]
Length = 762
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV FVP WVPE+++ TLH+LA+GLRGW
Sbjct: 701 AYVSCFVGLLVSFVPTWVPEVKQGTLHKLASGLRGW 736
>ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Phoenix dactylifera]
Length = 818
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV FVP WVPE+++ TLH+LA+GLRGW
Sbjct: 757 AYVSCFVGLLVSFVPTWVPEVKQGTLHKLASGLRGW 792
>ref|XP_020585458.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 33A-like [Phalaenopsis equestris]
Length = 451
Score = 65.1 bits (157), Expect = 4e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC++GLLV FVPAW+PEIRK TL +LA GLRGW
Sbjct: 386 AYVSCILGLLVNFVPAWIPEIRKGTLRKLAAGLRGW 421
>gb|ONK67984.1| uncharacterized protein A4U43_C05F5910 [Asparagus officinalis]
Length = 146
Score = 60.8 bits (146), Expect = 1e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYV CL+GLLV FVP WVP IRKETL +LANGL+ W
Sbjct: 85 AYVMCLLGLLVEFVPGWVPGIRKETLWKLANGLKSW 120
>ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Elaeis guineensis]
Length = 1330
Score = 62.8 bits (151), Expect = 3e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC V LLV FVP WVPE+++ TLH+LA GLRGW
Sbjct: 1269 AYVSCFVALLVSFVPTWVPEVKQGTLHKLAGGLRGW 1304
>ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 62.0 bits (149), Expect = 5e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV FVP WVPE+++ TL +LA+GLRGW
Sbjct: 1270 AYVSCFVGLLVSFVPTWVPEVKQLTLRKLASGLRGW 1305
>gb|POF07329.1| mediator of rna polymerase ii transcription subunit 33b [Quercus
suber]
Length = 369
Score = 60.8 bits (146), Expect = 1e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AY+SCLVGL+V F P+W+ E++ ETL +LANGLRGW
Sbjct: 305 AYLSCLVGLMVSFTPSWIQEVKLETLRKLANGLRGW 340
>ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 33A-like [Asparagus officinalis]
Length = 1070
Score = 60.8 bits (146), Expect = 1e-07
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYV CL+GLLV FVP WVP IRKETL +LANGL+ W
Sbjct: 1009 AYVMCLLGLLVEFVPGWVPGIRKETLWKLANGLKSW 1044
>gb|POE87032.1| mediator of rna polymerase ii transcription subunit 33a [Quercus
suber]
Length = 1291
Score = 60.8 bits (146), Expect = 1e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AY+SCLVGL+V F P+W+ E++ ETL +LANGLRGW
Sbjct: 1227 AYLSCLVGLMVSFTPSWIQEVKLETLRKLANGLRGW 1262
>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 60.8 bits (146), Expect = 1e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV F PAWV E+++ETL +LA+GLRGW
Sbjct: 1269 AYVSCFVGLLVKFAPAWVHEVKQETLRKLASGLRGW 1304
>ref|XP_023871507.1| mediator of RNA polymerase II transcription subunit 33A-like [Quercus
suber]
Length = 1331
Score = 60.8 bits (146), Expect = 1e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AY+SCLVGL+V F P+W+ E++ ETL +LANGLRGW
Sbjct: 1267 AYLSCLVGLMVSFTPSWIQEVKLETLRKLANGLRGW 1302
>ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 60.8 bits (146), Expect = 1e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV FVP WVPE+++ TL +LA+GLRGW
Sbjct: 1270 AYVSCFVGLLVSFVPTWVPEVKQLTLCKLASGLRGW 1305
>ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 60.8 bits (146), Expect = 1e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV FVP WVPE+++ TL +LA+GLRGW
Sbjct: 1291 AYVSCFVGLLVSFVPTWVPEVKQLTLCKLASGLRGW 1326
>ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 60.8 bits (146), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGLLV F PAWV E ++E LH+LA+GLRGW
Sbjct: 1301 AYVSCFVGLLVNFAPAWVLEAKQEALHKLASGLRGW 1336
>ref|XP_010278916.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Nelumbo nucifera]
Length = 1322
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSC VGL+V F PAW+ E+R+E L +LANGLRGW
Sbjct: 1258 AYVSCFVGLVVHFAPAWIQEVRQEILRKLANGLRGW 1293
>ref|XP_008244324.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Prunus mume]
Length = 1323
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSCLVGL+V F PAW+ E++ ETL +LA GLRGW
Sbjct: 1257 AYVSCLVGLMVNFAPAWIQEVKVETLKKLAGGLRGW 1292
>ref|XP_021685771.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X4 [Hevea brasiliensis]
ref|XP_021685772.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X4 [Hevea brasiliensis]
Length = 1151
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSCLV LLV F PAW+ E+R ETL +LA+GLRGW
Sbjct: 1087 AYVSCLVHLLVSFTPAWIQEVRLETLKKLASGLRGW 1122
>ref|XP_021685770.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X3 [Hevea brasiliensis]
Length = 1196
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSCLV LLV F PAW+ E+R ETL +LA+GLRGW
Sbjct: 1132 AYVSCLVHLLVSFTPAWIQEVRLETLKKLASGLRGW 1167
>ref|XP_021685769.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X2 [Hevea brasiliensis]
Length = 1328
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSCLV LLV F PAW+ E+R ETL +LA+GLRGW
Sbjct: 1264 AYVSCLVHLLVSFTPAWIQEVRLETLKKLASGLRGW 1299
>ref|XP_021685768.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X1 [Hevea brasiliensis]
Length = 1330
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 2 AYVSCLVGLLVGFVPAWVPEIRKETLHRLANGLRGW 109
AYVSCLV LLV F PAW+ E+R ETL +LA+GLRGW
Sbjct: 1266 AYVSCLVHLLVSFTPAWIQEVRLETLKKLASGLRGW 1301