BLASTX nr result

ID: Ophiopogon23_contig00027879 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00027879
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248636.1| translocase of chloroplast 120, chloroplasti...    87   3e-17
ref|XP_010920185.1| PREDICTED: translocase of chloroplast 120, c...    63   4e-09

>ref|XP_020248636.1| translocase of chloroplast 120, chloroplastic [Asparagus
           officinalis]
 gb|ONK57100.1| uncharacterized protein A4U43_C10F16620 [Asparagus officinalis]
          Length = 1215

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 62/153 (40%), Positives = 79/153 (51%), Gaps = 42/153 (27%)
 Frame = -3

Query: 349 TKLNGVEIDCVTEEGLGEPQDDGEQIIENGQKSLTEEKLGNGEHIGAVSDEK-------V 191
           TKLNG+E D V +EG    +D GE+  ENG K LTE+KL NGE  G VSDE        +
Sbjct: 209 TKLNGLEGDDVVKEGSFGSKDVGEKGFENGDKELTEDKLDNGECNGTVSDEGHNVLHEIL 268

Query: 190 ENGVSLVMTSDGM----------------------------------GVDCVTESKKET- 116
           ENG+SLV +SD +                                  GVD  T+SK++T 
Sbjct: 269 ENGLSLVASSDEICVGTASKSKEQAPADEICVEAVTQSEEQTHVDERGVDTGTKSKEQTH 328

Query: 115 MDELAMDTDTKSNEKAYTEGVEEMVNDSVGSDS 17
           +DE+ +DTD K  E+   E V+ MVNDSV  DS
Sbjct: 329 VDEMGVDTDVKFKEELPNESVKHMVNDSVELDS 361


>ref|XP_010920185.1| PREDICTED: translocase of chloroplast 120, chloroplastic [Elaeis
           guineensis]
          Length = 1220

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
 Frame = -3

Query: 358 AVETKLNGVEIDCVTEEGLGE-------PQDDGEQIIENGQKSLTEEKLGNGEHIGAVSD 200
           A+ T+LNGVE D V  E +G+       P +DGE I+E+ ++   +E   +GE    +SD
Sbjct: 239 AMPTELNGVEADDVISENVGDVVKVSSIPVNDGEVILEDSKEEFVDENSNDGEPDEVISD 298

Query: 199 -------EKVENGVSLVMTSDGMGVDCVTESKKETMDELAMDTDTKSNEKAYTEGVEEMV 41
                  EK ENG SL +  D   V C T+SK++T  +  +D     + ++ T   E+ +
Sbjct: 299 GLHVAVYEKTENGGSLEVVFDKNSVSCGTDSKEQTPHDDGVDQMQDVSVRSSTFPNEQTI 358

Query: 40  NDSVGSDSAPSTL 2
           N    S+  PS +
Sbjct: 359 NQQ--SEEGPSKM 369


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