BLASTX nr result

ID: Ophiopogon23_contig00027717 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00027717
         (372 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA46655.1| hypothetical protein AXF42_Ash021271 [Apostasia s...    54   2e-06
gb|PKA46651.1| hypothetical protein AXF42_Ash021267 [Apostasia s...    54   8e-06

>gb|PKA46655.1| hypothetical protein AXF42_Ash021271 [Apostasia shenzhenica]
          Length = 186

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = -3

Query: 367 HDDITGYIANCNDNYKFSAYPHSILQEFAIDNEVIVKSHLE-----VVGKLHIQCMCPYK 203
           H +I+  I+  N+ YK  A  H  LQEF+  + V+++  LE     VV KL  +   P+K
Sbjct: 42  HQEISKRISLSNEAYKKLADAHKRLQEFSEGDYVMIRVRLERFPSGVVKKLQARGAGPFK 101

Query: 202 ILKKVTPINHELDIPWDPGISLTLSGDDLIRSAAYTFRDLPSSTAEPS 59
           ILKK+    + +D+P D GIS T +  DL+  A      +PS   EPS
Sbjct: 102 ILKKLGSNAYVVDLPSDFGISTTFNISDLV--AYKEPAAIPSDPFEPS 147


>gb|PKA46651.1| hypothetical protein AXF42_Ash021267 [Apostasia shenzhenica]
          Length = 258

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
 Frame = -3

Query: 367 HDDITGYIANCNDNYKFSAYPHSILQEFAIDNEVIVKSHLE-----VVGKLHIQCMCPYK 203
           H +I+  I+  N+ YK  A  H  LQEF+  + V+++   E     V+ KL  +   P+K
Sbjct: 123 HQEISKRISLSNEAYKKLADAHKRLQEFSEGDYVMIRVRPERFPSGVIKKLQARGAGPFK 182

Query: 202 ILKKVTPINHELDIPWDPGISLTLSGDDLIRSAAYTFRDLPSSTAEPS 59
           ILKK+    + +D+P D GIS T +  DL+     T   +PS   EPS
Sbjct: 183 ILKKLGSNEYVVDLPLDFGISTTFNISDLVAYKEPT--AIPSDPFEPS 228


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