BLASTX nr result

ID: Ophiopogon23_contig00027544 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00027544
         (378 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024185802.1| uncharacterized protein LOC112190588 [Rosa c...    62   2e-08

>ref|XP_024185802.1| uncharacterized protein LOC112190588 [Rosa chinensis]
 ref|XP_024185803.1| uncharacterized protein LOC112190588 [Rosa chinensis]
 gb|PRQ47017.1| putative transposase, Tnp1/En/Spm [Rosa chinensis]
          Length = 421

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 34/81 (41%), Positives = 46/81 (56%)
 Frame = +3

Query: 33  IHGSLVGQDNIKALVMTPILPDTPLIFPLDGPEIYTVGQAVGTFVEWPKRLVISGRTPMP 212
           IHG  +G+DN+   V+  I+ D  L FP+   +I TVG A+GT V WP++LV+   TP P
Sbjct: 266 IHGVPLGEDNVHVSVVGTIVHDALLPFPMKDADIVTVGDAIGTCVAWPRKLVV---TPAP 322

Query: 213 AKGKKVAPQVPTKGSLPTKGS 275
               K   Q  TK + P K S
Sbjct: 323 EAPPKPIEQKKTKRANPKKRS 343


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