BLASTX nr result
ID: Ophiopogon23_contig00027210
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00027210
(452 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633086.1| PREDICTED: sm-like protein LSM1B [Vitis vini... 54 2e-06
gb|KVH97911.1| hypothetical protein Ccrd_023870 [Cynara carduncu... 54 3e-06
ref|XP_010041873.1| PREDICTED: sm-like protein LSM1B, partial [E... 52 5e-06
gb|PKI41657.1| hypothetical protein CRG98_037964 [Punica granatum] 52 6e-06
gb|KVI05858.1| Like-Sm (LSM) domain-containing protein [Cynara c... 52 9e-06
ref|XP_023734459.1| sm-like protein LSM1B [Lactuca sativa] >gi|1... 52 9e-06
gb|OWM86057.1| hypothetical protein CDL15_Pgr027283 [Punica gran... 52 9e-06
ref|XP_018839212.1| PREDICTED: sm-like protein LSM1B [Juglans re... 52 9e-06
ref|XP_010939893.1| PREDICTED: sm-like protein LSM1B [Elaeis gui... 52 9e-06
ref|XP_010937317.1| PREDICTED: sm-like protein LSM1B [Elaeis gui... 52 9e-06
ref|XP_008802479.1| PREDICTED: sm-like protein LSM1B [Phoenix da... 52 9e-06
ref|XP_008782743.1| PREDICTED: sm-like protein LSM1B [Phoenix da... 52 9e-06
ref|XP_008380788.1| PREDICTED: sm-like protein LSM1B [Malus dome... 52 9e-06
ref|XP_010061830.1| PREDICTED: sm-like protein LSM1B [Eucalyptus... 52 9e-06
ref|XP_012831319.1| PREDICTED: sm-like protein LSM1B [Erythranth... 52 9e-06
ref|XP_006836602.1| sm-like protein LSM1B [Amborella trichopoda]... 52 9e-06
ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria v... 52 9e-06
ref|XP_007215150.1| sm-like protein LSM1B [Prunus persica] >gi|6... 52 9e-06
>ref|XP_003633086.1| PREDICTED: sm-like protein LSM1B [Vitis vinifera]
emb|CBI27784.3| unnamed protein product, partial [Vitis vinifera]
Length = 128
Score = 54.3 bits (129), Expect = 2e-06
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED++FS SLASY + RSFDQFANAVLE
Sbjct: 1 MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLE 49
>gb|KVH97911.1| hypothetical protein Ccrd_023870 [Cynara cardunculus var. scolymus]
Length = 150
Score = 54.3 bits (129), Expect = 3e-06
Identities = 29/54 (53%), Positives = 31/54 (57%)
Frame = +3
Query: 291 KGLISMSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
K L +MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 18 KSLSAMSWAGPEDIHLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 71
>ref|XP_010041873.1| PREDICTED: sm-like protein LSM1B, partial [Eucalyptus grandis]
Length = 100
Score = 52.4 bits (124), Expect = 5e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLE 49
>gb|PKI41657.1| hypothetical protein CRG98_037964 [Punica granatum]
Length = 107
Score = 52.4 bits (124), Expect = 6e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>gb|KVI05858.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 107
Score = 52.0 bits (123), Expect = 9e-06
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_023734459.1| sm-like protein LSM1B [Lactuca sativa]
gb|PLY97257.1| hypothetical protein LSAT_1X37901 [Lactuca sativa]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>gb|OWM86057.1| hypothetical protein CDL15_Pgr027283 [Punica granatum]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_018839212.1| PREDICTED: sm-like protein LSM1B [Juglans regia]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKFLGILRSFDQFANAVLE 49
>ref|XP_010939893.1| PREDICTED: sm-like protein LSM1B [Elaeis guineensis]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_010937317.1| PREDICTED: sm-like protein LSM1B [Elaeis guineensis]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_008802479.1| PREDICTED: sm-like protein LSM1B [Phoenix dactylifera]
ref|XP_008802480.1| PREDICTED: sm-like protein LSM1B [Phoenix dactylifera]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_008782743.1| PREDICTED: sm-like protein LSM1B [Phoenix dactylifera]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_008380788.1| PREDICTED: sm-like protein LSM1B [Malus domestica]
ref|XP_008341819.1| PREDICTED: sm-like protein LSM1B [Malus domestica]
ref|XP_009350857.1| PREDICTED: sm-like protein LSM1B [Pyrus x bretschneideri]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_010061830.1| PREDICTED: sm-like protein LSM1B [Eucalyptus grandis]
gb|KCW68858.1| hypothetical protein EUGRSUZ_F02453 [Eucalyptus grandis]
gb|KCW68859.1| hypothetical protein EUGRSUZ_F02453 [Eucalyptus grandis]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLE 49
>ref|XP_012831319.1| PREDICTED: sm-like protein LSM1B [Erythranthe guttata]
gb|EYU45893.1| hypothetical protein MIMGU_mgv1a016267mg [Erythranthe guttata]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_006836602.1| sm-like protein LSM1B [Amborella trichopoda]
gb|ERM99455.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPED+ S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLE 49
>ref|XP_007215150.1| sm-like protein LSM1B [Prunus persica]
ref|XP_008228168.1| PREDICTED: sm-like protein LSM1B [Prunus mume]
ref|XP_021828447.1| sm-like protein LSM1B [Prunus avium]
gb|ONI15339.1| hypothetical protein PRUPE_3G038200 [Prunus persica]
Length = 128
Score = 52.4 bits (124), Expect = 9e-06
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = +3
Query: 306 MSWAGPEDVIFSASLASYXXXXXXXXXXXXXXXXXIFRSFDQFANAVLE 452
MSWAGPEDV S SLASY I RSFDQFANAVLE
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLE 49