BLASTX nr result

ID: Ophiopogon23_contig00025274 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00025274
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253383.1| F-box protein SKIP14-like [Asparagus officin...   124   2e-31
ref|XP_020246522.1| F-box protein SKIP14-like [Asparagus officin...   109   2e-25
ref|XP_008812417.1| PREDICTED: F-box protein SKIP14 [Phoenix dac...    74   1e-12
ref|XP_010912858.1| PREDICTED: F-box protein SKIP14-like [Elaeis...    67   3e-10
gb|KDO82040.1| hypothetical protein CISIN_1g011064mg [Citrus sin...    55   8e-06
ref|XP_006484028.1| PREDICTED: F-box protein SKIP14 [Citrus sine...    55   8e-06
ref|XP_006438126.1| F-box protein SKIP14 [Citrus clementina] >gi...    55   8e-06

>ref|XP_020253383.1| F-box protein SKIP14-like [Asparagus officinalis]
 gb|ONK77717.1| uncharacterized protein A4U43_C02F9790 [Asparagus officinalis]
          Length = 379

 Score =  124 bits (312), Expect = 2e-31
 Identities = 67/96 (69%), Positives = 72/96 (75%)
 Frame = +1

Query: 142 MTLNFTSYSAAFPAASIRVDDEFGSMVWDRGTENCGGSSPCCLNWERNWERSDPFENGGG 321
           MTLNF+ YS  FPA SIR DD+FGS+VWD+G ENCG  SP    +E            GG
Sbjct: 1   MTLNFSPYSV-FPA-SIRSDDDFGSLVWDKGVENCG--SPNFFAYEN-----------GG 45

Query: 322 GRDWTDPIDLLPADPFGMELSSNLAAAIVGWFEDLG 429
           GRDWTDPIDLLPADPFGMELSSNLAAAIVGWFEDLG
Sbjct: 46  GRDWTDPIDLLPADPFGMELSSNLAAAIVGWFEDLG 81


>ref|XP_020246522.1| F-box protein SKIP14-like [Asparagus officinalis]
 gb|ONK57601.1| uncharacterized protein A4U43_C09F2160 [Asparagus officinalis]
          Length = 399

 Score =  109 bits (272), Expect = 2e-25
 Identities = 62/96 (64%), Positives = 68/96 (70%)
 Frame = +1

Query: 142 MTLNFTSYSAAFPAASIRVDDEFGSMVWDRGTENCGGSSPCCLNWERNWERSDPFENGGG 321
           MTLN +SY   FPA S+  DD+F   +WD GTENCG   PC LN  +    SD +EN  G
Sbjct: 1   MTLNVSSYPG-FPA-SVCSDDDFDWTIWDIGTENCG--KPCLLNRGK----SDYYENVEG 52

Query: 322 GRDWTDPIDLLPADPFGMELSSNLAAAIVGWFEDLG 429
            RDW DPIDLLPADPFGM L SNLAAAIVGWFEDLG
Sbjct: 53  -RDWVDPIDLLPADPFGMGLGSNLAAAIVGWFEDLG 87


>ref|XP_008812417.1| PREDICTED: F-box protein SKIP14 [Phoenix dactylifera]
          Length = 402

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 54/105 (51%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
 Frame = +1

Query: 142 MTLNFTSYSAAFPAASIRVDDEFGSMVWDRGTENCGGSSPCCLNWERNWERSDPFENGG- 318
           MTLNF+SYS  FPA SIR D++FGS   DR  E  G   P   +  R  E  +P+ NGG 
Sbjct: 1   MTLNFSSYSV-FPA-SIRADEDFGSARCDRSAE--GFDKPPLSS--RGIE--NPYGNGGD 52

Query: 319 GGR----DWTDPIDLLPADPFGMELS---SNLAAAIVGWFEDLGV 432
           GGR       DP+DLLP+DPFGMELS   SN   AI GW ED  +
Sbjct: 53  GGRADRNGSCDPVDLLPSDPFGMELSTTLSNTFTAIAGWIEDFSL 97


>ref|XP_010912858.1| PREDICTED: F-box protein SKIP14-like [Elaeis guineensis]
          Length = 435

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
 Frame = +1

Query: 142 MTLNFTSYSAAFPAASIRVDDEFGSMVWDRGTENCGGSSPCCLNWERNWERSDPFENGGG 321
           MTLNF+SYS  FPA SIR D++FGS   DR  E  G   P    W      +     G G
Sbjct: 1   MTLNFSSYSV-FPA-SIRADEDFGSARCDRSAE--GFDKPF---WSGRGIENPCGTGGDG 53

Query: 322 GR----DWTDPIDLLPADPFGMELSSNLA---AAIVGWFEDLGV 432
           GR       DP+DLLP+DPFGMELS+ L     AI G  ED  V
Sbjct: 54  GRADRNGSCDPVDLLPSDPFGMELSTTLGNTFTAIAGLIEDFSV 97


>gb|KDO82040.1| hypothetical protein CISIN_1g011064mg [Citrus sinensis]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
 Frame = +1

Query: 271 NWERNWERSDPF-------ENGGGGRDW--TDPIDLLPADPFGMELSSNLAAAIVGWFED 423
           NW  N E  D F       EN  G ++   TD IDLLP+DPFGM++S+   AAI GW ED
Sbjct: 46  NWHLNQEIDDCFDYGRDRAENRCGSQESVSTDIIDLLPSDPFGMDISTTFTAAITGWLED 105

Query: 424 LGV 432
           L V
Sbjct: 106 LEV 108


>ref|XP_006484028.1| PREDICTED: F-box protein SKIP14 [Citrus sinensis]
 dbj|GAY44014.1| hypothetical protein CUMW_079030 [Citrus unshiu]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
 Frame = +1

Query: 271 NWERNWERSDPF-------ENGGGGRDW--TDPIDLLPADPFGMELSSNLAAAIVGWFED 423
           NW  N E  D F       EN  G ++   TD IDLLP+DPFGM++S+   AAI GW ED
Sbjct: 46  NWHLNQEIDDCFDYGRDRAENRCGSQESVSTDIIDLLPSDPFGMDISTTFTAAITGWLED 105

Query: 424 LGV 432
           L V
Sbjct: 106 LEV 108


>ref|XP_006438126.1| F-box protein SKIP14 [Citrus clementina]
 gb|ESR51366.1| hypothetical protein CICLE_v10031334mg [Citrus clementina]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
 Frame = +1

Query: 271 NWERNWERSDPF-------ENGGGGRDW--TDPIDLLPADPFGMELSSNLAAAIVGWFED 423
           NW  N E  D F       EN  G ++   TD IDLLP+DPFGM++S+   AAI GW ED
Sbjct: 46  NWHLNQEIDDCFDYGRDRAENRCGSQESVSTDIIDLLPSDPFGMDISTTFTAAITGWLED 105

Query: 424 LGV 432
           L V
Sbjct: 106 LEV 108


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